Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B19
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    26   0.77 
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    24   4.1  
AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical prote...    24   4.1  
AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosens...    24   4.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.5  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 204 ILTLFRKVQ*TVSRVKLQTFHIHCLPKFANVLAFSEEIN 320
           +LT+F  V+   + +KL    IHCL + A   A  +E+N
Sbjct: 225 LLTIFSNVKYCSAMLKLVALRIHCLARVAQDRA-EKELN 262


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 154 FYFAILLMTNGLRSLRASFISILNCFFLFV 65
           F +  L+ T    S  A FIS ++CF L V
Sbjct: 41  FVYCCLVGTFPFNSFLAGFISTVSCFVLGV 70


>AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical protein
           protein.
          Length = 117

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 185 RQTSLTYTDVVQESSVNCEPSQVAN 259
           RQ      +V+Q +  NC P Q  N
Sbjct: 67  RQLKAALPEVIQRNCRNCSPQQAQN 91


>AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosensory
           protein CSP4 protein.
          Length = 117

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 185 RQTSLTYTDVVQESSVNCEPSQVAN 259
           RQ      +V+Q +  NC P Q  N
Sbjct: 67  RQLKAALPEVIQRNCRNCSPQQAQN 91


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 515 KRNNITECVHKC 550
           KRN +T C+ KC
Sbjct: 804 KRNGLTICIEKC 815


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,173
Number of Sequences: 2352
Number of extensions: 9859
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)