Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B17
         (121 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125038-1|AAI25039.1|  146|Homo sapiens chromosome 8 open readi...    29   2.7  
M97287-1|AAA60304.1|  763|Homo sapiens SATB1 protein.                  29   3.6  
BC001744-1|AAH01744.1|  763|Homo sapiens SATB1 protein protein.        29   3.6  
AB209761-1|BAD92998.1|  797|Homo sapiens special AT-rich sequenc...    29   3.6  
D63997-1|BAA23661.1| 1530|Homo sapiens GCP170 protein.                 28   6.3  
BC146675-1|AAI46676.1| 1134|Homo sapiens GOLGA3 protein protein.       28   6.3  
BC142658-1|AAI42659.1| 1134|Homo sapiens GOLGA3 protein protein.       28   6.3  
BC060826-1|AAH60826.1|  843|Homo sapiens GOLGA3 protein protein.       28   6.3  
AF485338-1|AAL93149.1| 1498|Homo sapiens golgin-160 protein.           28   6.3  
AB027133-1|BAB71953.1| 1390|Homo sapiens male enhanced antigen-2...    28   6.3  

>BC125038-1|AAI25039.1|  146|Homo sapiens chromosome 8 open reading
           frame 71 protein.
          Length = 146

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 121 PPGWLTCLGHASYGRRAKRWG*EVCTLPHP 32
           PP W+     ++YG R +RW  ++ TLP P
Sbjct: 86  PPPWVQLQLSSAYGARQQRW--QLSTLPEP 113


>M97287-1|AAA60304.1|  763|Homo sapiens SATB1 protein.
          Length = 763

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 14  SCNGPAGMGECTHFSTPPFRPPPVXGMT*AGQPAG 118
           S N  + MG     STPP RPP V   T A +  G
Sbjct: 451 SLNAASAMGPAPLISTPPSRPPQVKTATIATERNG 485


>BC001744-1|AAH01744.1|  763|Homo sapiens SATB1 protein protein.
          Length = 763

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 14  SCNGPAGMGECTHFSTPPFRPPPVXGMT*AGQPAG 118
           S N  + MG     STPP RPP V   T A +  G
Sbjct: 451 SLNAASAMGPAPLISTPPSRPPQVKTATIATERNG 485


>AB209761-1|BAD92998.1|  797|Homo sapiens special AT-rich sequence
           binding protein 1 variant protein.
          Length = 797

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 14  SCNGPAGMGECTHFSTPPFRPPPVXGMT*AGQPAG 118
           S N  + MG     STPP RPP V   T A +  G
Sbjct: 453 SLNAASAMGPAPLISTPPSRPPQVKTATIATERNG 487


>D63997-1|BAA23661.1| 1530|Homo sapiens GCP170 protein.
          Length = 1530

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 5   EASSCNGPAGMGECTHFSTPPFRPPP 82
           E  S +GP   G C +  TPPF  PP
Sbjct: 54  EGESPDGPGQGGLCQNGPTPPFPDPP 79


>BC146675-1|AAI46676.1| 1134|Homo sapiens GOLGA3 protein protein.
          Length = 1134

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 5   EASSCNGPAGMGECTHFSTPPFRPPP 82
           E  S +GP   G C +  TPPF  PP
Sbjct: 54  EGESPDGPGQGGLCQNGPTPPFPDPP 79


>BC142658-1|AAI42659.1| 1134|Homo sapiens GOLGA3 protein protein.
          Length = 1134

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 5   EASSCNGPAGMGECTHFSTPPFRPPP 82
           E  S +GP   G C +  TPPF  PP
Sbjct: 54  EGESPDGPGQGGLCQNGPTPPFPDPP 79


>BC060826-1|AAH60826.1|  843|Homo sapiens GOLGA3 protein protein.
          Length = 843

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 5   EASSCNGPAGMGECTHFSTPPFRPPP 82
           E  S +GP   G C +  TPPF  PP
Sbjct: 54  EGESPDGPGQGGLCQNGPTPPFPDPP 79


>AF485338-1|AAL93149.1| 1498|Homo sapiens golgin-160 protein.
          Length = 1498

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 5   EASSCNGPAGMGECTHFSTPPFRPPP 82
           E  S +GP   G C +  TPPF  PP
Sbjct: 54  EGESPDGPGQGGLCQNGPTPPFPDPP 79


>AB027133-1|BAB71953.1| 1390|Homo sapiens male enhanced antigen-2
           protein.
          Length = 1390

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 5   EASSCNGPAGMGECTHFSTPPFRPPP 82
           E  S +GP   G C +  TPPF  PP
Sbjct: 54  EGESPDGPGQGGLCQNGPTPPFPDPP 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.136    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,080,933
Number of Sequences: 237096
Number of extensions: 477749
Number of successful extensions: 1289
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 76,859,062
effective HSP length: 20
effective length of database: 72,117,142
effective search space used: 1370225698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)