Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B17
         (121 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011407-1|AAR96199.1|  669|Drosophila melanogaster AT20168p pro...    27   4.8  
AY069106-1|AAL39251.1|  763|Drosophila melanogaster GH12404p pro...    27   4.8  
AE014297-450|ABI31144.1|  669|Drosophila melanogaster CG33097-PB...    27   4.8  
AE014297-449|AAF54130.2|  763|Drosophila melanogaster CG33097-PA...    27   4.8  
AY061478-1|AAL29026.1|  556|Drosophila melanogaster LD44438p pro...    26   6.3  
AE014296-1722|AAF50215.2|  827|Drosophila melanogaster CG6754-PB...    26   6.3  
AY069603-1|AAL39748.2| 1876|Drosophila melanogaster LD36178p pro...    26   8.4  

>BT011407-1|AAR96199.1|  669|Drosophila melanogaster AT20168p
           protein.
          Length = 669

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = +2

Query: 26  PAGMGECTHFSTPPF-RPPPVXGMT*AGQPAG 118
           P GM     F  PPF  PPP  G      PAG
Sbjct: 224 PPGMQAPPGFGQPPFCMPPPTYGFPGGPAPAG 255


>AY069106-1|AAL39251.1|  763|Drosophila melanogaster GH12404p
           protein.
          Length = 763

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = +2

Query: 26  PAGMGECTHFSTPPF-RPPPVXGMT*AGQPAG 118
           P GM     F  PPF  PPP  G      PAG
Sbjct: 224 PPGMQAPPGFGQPPFCMPPPTYGFPGGPAPAG 255


>AE014297-450|ABI31144.1|  669|Drosophila melanogaster CG33097-PB,
           isoform B protein.
          Length = 669

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = +2

Query: 26  PAGMGECTHFSTPPF-RPPPVXGMT*AGQPAG 118
           P GM     F  PPF  PPP  G      PAG
Sbjct: 224 PPGMQAPPGFGQPPFCMPPPTYGFPGGPAPAG 255


>AE014297-449|AAF54130.2|  763|Drosophila melanogaster CG33097-PA,
           isoform A protein.
          Length = 763

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = +2

Query: 26  PAGMGECTHFSTPPF-RPPPVXGMT*AGQPAG 118
           P GM     F  PPF  PPP  G      PAG
Sbjct: 224 PPGMQAPPGFGQPPFCMPPPTYGFPGGPAPAG 255


>AY061478-1|AAL29026.1|  556|Drosophila melanogaster LD44438p
           protein.
          Length = 556

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 117 PAG*PA*VMPXTGGGRKGGVEKCVHSPIPAGPLH 16
           PA  PA V   T   +    EK VH P+PA   H
Sbjct: 171 PAPAPAPVQRVTRQSKAIAEEKSVHPPVPAASKH 204


>AE014296-1722|AAF50215.2|  827|Drosophila melanogaster CG6754-PB
           protein.
          Length = 827

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 117 PAG*PA*VMPXTGGGRKGGVEKCVHSPIPAGPLH 16
           PA  PA V   T   +    EK VH P+PA   H
Sbjct: 442 PAPAPAPVQRVTRQSKAIAEEKSVHPPVPAASKH 475


>AY069603-1|AAL39748.2| 1876|Drosophila melanogaster LD36178p
          protein.
          Length = 1876

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 23 GPA-GMGECTHFSTPPFRPPPVXGMT 97
          GP  G+  CTH +    RPPP+ G T
Sbjct: 4  GPRLGITGCTHSAPQLHRPPPLQGPT 29


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.136    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,084,928
Number of Sequences: 53049
Number of extensions: 146530
Number of successful extensions: 450
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 24,988,368
effective HSP length: 20
effective length of database: 23,927,388
effective search space used: 454620372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)