Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B15
(443 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001611-1|AAH01611.1| 459|Homo sapiens Similar to bromodomain-... 58 1e-08
AF213969-1|AAF19526.1| 652|Homo sapiens bromodomain protein CEL... 58 1e-08
BC094706-1|AAH94706.1| 651|Homo sapiens bromodomain containing ... 55 1e-07
BC050728-1|AAH50728.1| 651|Homo sapiens bromodomain containing ... 55 1e-07
AK074613-1|BAC11089.1| 405|Homo sapiens protein ( Homo sapiens ... 55 1e-07
AJ271881-1|CAB72445.1| 651|Homo sapiens bromodomain containing ... 55 1e-07
AF152604-1|AAF75126.1| 651|Homo sapiens bromodomain-containing ... 55 1e-07
AK027308-1|BAB55031.1| 351|Homo sapiens protein ( Homo sapiens ... 54 2e-07
AF167351-1|AAD46658.1| 56|Homo sapiens FT002 protein. 34 0.19
AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein. 30 4.1
Y11251-1|CAA72121.1| 1148|Homo sapiens SRrp129 protein. 29 5.5
BC033589-1|AAH33589.1| 897|Homo sapiens Unknown (protein for IM... 29 5.5
AF030234-1|AAC39565.1| 1148|Homo sapiens splicing factor Sip1 pr... 29 5.5
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 29 7.2
>BC001611-1|AAH01611.1| 459|Homo sapiens Similar to
bromodomain-containing 7 protein.
Length = 459
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 10 RNIAKGVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQ----SNTEILRFA 177
RN V +NYGP+SSYAP YD TFA ++K++S LIY T +S S E L
Sbjct: 200 RNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFLATC 259
Query: 178 SDSPWT---AIYDMEAMFPDKKQHQE-QTSAPDDNDISKVKVDVEQLRSLTEL 324
D P+ ++ D+ + QE + S P+D ++ +++ +TE+
Sbjct: 260 QDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRTLDTAKEMEQITEV 312
>AF213969-1|AAF19526.1| 652|Homo sapiens bromodomain protein
CELTIX1 protein.
Length = 652
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 10 RNIAKGVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQ----SNTEILRFA 177
RN V +NYGP+SSYAP YD TFA ++K++S LIY T +S S E L
Sbjct: 393 RNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFLATC 452
Query: 178 SDSPWT---AIYDMEAMFPDKKQHQE-QTSAPDDNDISKVKVDVEQLRSLTEL 324
D P+ ++ D+ + QE + S P+D ++ +++ +TE+
Sbjct: 453 QDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRTLDTAKEMEQITEV 505
>BC094706-1|AAH94706.1| 651|Homo sapiens bromodomain containing 7
protein.
Length = 651
Score = 55.2 bits (127), Expect = 1e-07
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 10 RNIAKGVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQ----SNTEILRFA 177
RN V +NYGP+SSYAP YD TFA ++K++S LIY T +S S E L
Sbjct: 393 RNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFLATC 452
Query: 178 SDSPWT---AIYDMEAMFPDKKQHQE-QTSAPDDNDISKVKVDVEQLRSLTEL 324
D P+ ++ D+ + QE + S P+D ++ +D + +TE+
Sbjct: 453 QDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRT-LDTAKEMEITEV 504
>BC050728-1|AAH50728.1| 651|Homo sapiens bromodomain containing 7
protein.
Length = 651
Score = 55.2 bits (127), Expect = 1e-07
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 10 RNIAKGVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQ----SNTEILRFA 177
RN V +NYGP+SSYAP YD TFA ++K++S LIY T +S S E L
Sbjct: 393 RNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFLATC 452
Query: 178 SDSPWT---AIYDMEAMFPDKKQHQE-QTSAPDDNDISKVKVDVEQLRSLTEL 324
D P+ ++ D+ + QE + S P+D ++ +D + +TE+
Sbjct: 453 QDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRT-LDTAKEMEITEV 504
>AK074613-1|BAC11089.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ90132 fis, clone HEMBB1000542, highly similar to
Mus musculus bromodomain-containing protein BP75 mRNA.
).
Length = 405
Score = 55.2 bits (127), Expect = 1e-07
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 10 RNIAKGVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQ----SNTEILRFA 177
RN V +NYGP+SSYAP YD TFA ++K++S LIY T +S S E L
Sbjct: 147 RNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFLATC 206
Query: 178 SDSPWT---AIYDMEAMFPDKKQHQE-QTSAPDDNDISKVKVDVEQLRSLTEL 324
D P+ ++ D+ + QE + S P+D ++ +D + +TE+
Sbjct: 207 QDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRT-LDTAKEMEITEV 258
>AJ271881-1|CAB72445.1| 651|Homo sapiens bromodomain containing
protein protein.
Length = 651
Score = 55.2 bits (127), Expect = 1e-07
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 10 RNIAKGVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQ----SNTEILRFA 177
RN V +NYGP+SSYAP YD TFA ++K++S LIY T +S S E L
Sbjct: 393 RNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFLATC 452
Query: 178 SDSPWT---AIYDMEAMFPDKKQHQE-QTSAPDDNDISKVKVDVEQLRSLTEL 324
D P+ ++ D+ + QE + S P+D ++ +D + +TE+
Sbjct: 453 QDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRT-LDTAKEMEITEV 504
>AF152604-1|AAF75126.1| 651|Homo sapiens bromodomain-containing
protein protein.
Length = 651
Score = 55.2 bits (127), Expect = 1e-07
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = +1
Query: 10 RNIAKGVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQ----SNTEILRFA 177
RN V +NYGP+SSYAP YD TFA ++K++S LIY T +S S E L
Sbjct: 393 RNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFLATC 452
Query: 178 SDSPWT---AIYDMEAMFPDKKQHQE-QTSAPDDNDISKVKVDVEQLRSLTEL 324
D P+ ++ D+ + QE + S P+D ++ +D + +TE+
Sbjct: 453 QDYPYVMADSLLDVLTKGGHSRTLQEMEMSLPEDEGHTRT-LDTAKEMEITEV 504
>AK027308-1|BAB55031.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ14402 fis, clone HEMBA1003783, moderately
similar to Mus musculus bromodomain-containing protein
BP75 mRNA. ).
Length = 351
Score = 54.4 bits (125), Expect = 2e-07
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1
Query: 10 RNIAKGVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSES 144
RN V +NYGP+SSYAP YD TFA ++K++S LIY T +S
Sbjct: 93 RNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDS 137
>AF167351-1|AAD46658.1| 56|Homo sapiens FT002 protein.
Length = 56
Score = 34.3 bits (75), Expect = 0.19
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 37 INYGPFSSYAPSYDGTFATL 96
+NYGP+SSY P YD TF +
Sbjct: 34 LNYGPWSSYVPHYDSTFMNI 53
>AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein.
Length = 2144
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 266 SSGAEVCS*CCFLSGNMASMS*MAVQGESDANRSISVLLCPLSDGKVW-YMRCDSSLV 96
SSG + F +G +A + A+ +D ++ ++ +DGKVW Y D S+V
Sbjct: 1255 SSGLAAVNVSYFFNGRLAGLQRGAMSERTDIDKQGRIVSRMFADGKVWSYSYLDKSMV 1312
>Y11251-1|CAA72121.1| 1148|Homo sapiens SRrp129 protein.
Length = 1148
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 173 SRRTRPGQPSTTWKPCSPTRNNIKNKPQHP 262
+RR+R PSTTW P T K +PQ P
Sbjct: 474 TRRSRFHSPSTTWSPNKDTPQE-KKRPQSP 502
>BC033589-1|AAH33589.1| 897|Homo sapiens Unknown (protein for
IMAGE:4536747) protein.
Length = 897
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 173 SRRTRPGQPSTTWKPCSPTRNNIKNKPQHP 262
+RR+R PSTTW P T K +PQ P
Sbjct: 686 TRRSRFHSPSTTWSPNKDTPQE-KKRPQSP 714
>AF030234-1|AAC39565.1| 1148|Homo sapiens splicing factor Sip1
protein.
Length = 1148
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 173 SRRTRPGQPSTTWKPCSPTRNNIKNKPQHP 262
+RR+R PSTTW P T K +PQ P
Sbjct: 474 TRRSRFHSPSTTWSPNKDTPQE-KKRPQSP 502
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 232 KQHQEQTSAPDDNDISKVKVDVEQLRSLTELGIDMEFLNDIEDEIT 369
K HQ + A + N+ SKV V + +LR + LG+ F +ED ++
Sbjct: 567 KDHQSKGQALEPNE-SKVLVALVELRKICTLGLQRIFYLKLEDLVS 611
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.130 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,298,738
Number of Sequences: 237096
Number of extensions: 1519363
Number of successful extensions: 3021
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3021
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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