Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B15
(443 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical p... 60 9e-10
Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z74476-6|CAA98967.1| 1139|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z74473-6|CAA98951.1| 1139|Caenorhabditis elegans Hypothetical pr... 30 0.87
U20168-1|AAA66364.1| 1139|Caenorhabditis elegans Lin-25 protein ... 30 0.87
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 4.6
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 27 4.6
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 27 4.6
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 27 4.6
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 27 4.6
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 27 6.1
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical pr... 27 8.1
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 27 8.1
AY126454-1|AAM95163.1| 555|Caenorhabditis elegans nesprin-like ... 27 8.1
AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical... 27 8.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 8.1
>Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical
protein C01H6.7b protein.
Length = 582
Score = 59.7 bits (138), Expect = 9e-10
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Frame = +1
Query: 28 VKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQSNT-EILRFASDSP----- 189
V +NYGP+SS+AP YD T+AT+TKE++ L T +S S+ + RF D P
Sbjct: 393 VNYLNYGPYSSFAPMYDSTWATMTKEDTDLFLRTYGDKSNASDVMSMRRFVGDCPEFSEI 452
Query: 190 WTAIYDMEAMFPDKKQHQEQTSAPD------DNDISK---VKVDVEQLRSLTELGIDMEF 342
++ D K +E +A DND K V ++ + S++ LGI+ F
Sbjct: 453 IGSLLDTLTDGEHSKTMKELENAGKEVKEEVDNDEYKNETVLSLIDDVSSISNLGIETGF 512
Query: 343 LNDIEDEI 366
LNDI ++
Sbjct: 513 LNDIRQQV 520
>Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical
protein C01H6.7 protein.
Length = 636
Score = 59.7 bits (138), Expect = 9e-10
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Frame = +1
Query: 28 VKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQSNT-EILRFASDSP----- 189
V +NYGP+SS+AP YD T+AT+TKE++ L T +S S+ + RF D P
Sbjct: 393 VNYLNYGPYSSFAPMYDSTWATMTKEDTDLFLRTYGDKSNASDVMSMRRFVGDCPEFSEI 452
Query: 190 WTAIYDMEAMFPDKKQHQEQTSAPD------DNDISK---VKVDVEQLRSLTELGIDMEF 342
++ D K +E +A DND K V ++ + S++ LGI+ F
Sbjct: 453 IGSLLDTLTDGEHSKTMKELENAGKEVKEEVDNDEYKNETVLSLIDDVSSISNLGIETGF 512
Query: 343 LNDIEDEI 366
LNDI ++
Sbjct: 513 LNDIRQQV 520
>Z74476-6|CAA98967.1| 1139|Caenorhabditis elegans Hypothetical
protein F56H9.5 protein.
Length = 1139
Score = 29.9 bits (64), Expect = 0.87
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 178 SDSPWTAIYDMEAMFPDKKQHQEQTSAPDDNDISKVKVDVEQLRSLT--ELGIDMEFLND 351
SD+ T Y + + D+ + ++ +VE L L E+GI+ + ND
Sbjct: 534 SDAEQTMFYKWSMRYVKRVAKHRDPEPKDETEYIALRKEVEMLMRLANAEVGIEDDLEND 593
Query: 352 IEDEITASQ 378
+E+E+ Q
Sbjct: 594 VEEEMPEVQ 602
>Z74473-6|CAA98951.1| 1139|Caenorhabditis elegans Hypothetical
protein F56H9.5 protein.
Length = 1139
Score = 29.9 bits (64), Expect = 0.87
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 178 SDSPWTAIYDMEAMFPDKKQHQEQTSAPDDNDISKVKVDVEQLRSLT--ELGIDMEFLND 351
SD+ T Y + + D+ + ++ +VE L L E+GI+ + ND
Sbjct: 534 SDAEQTMFYKWSMRYVKRVAKHRDPEPKDETEYIALRKEVEMLMRLANAEVGIEDDLEND 593
Query: 352 IEDEITASQ 378
+E+E+ Q
Sbjct: 594 VEEEMPEVQ 602
>U20168-1|AAA66364.1| 1139|Caenorhabditis elegans Lin-25 protein
protein.
Length = 1139
Score = 29.9 bits (64), Expect = 0.87
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 178 SDSPWTAIYDMEAMFPDKKQHQEQTSAPDDNDISKVKVDVEQLRSLT--ELGIDMEFLND 351
SD+ T Y + + D+ + ++ +VE L L E+GI+ + ND
Sbjct: 534 SDAEQTMFYKWSMRYVKRVAKHRDPEPKDETEYIALRKEVEMLMRLANAEVGIEDDLEND 593
Query: 352 IEDEITASQ 378
+E+E+ Q
Sbjct: 594 VEEEMPEVQ 602
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 194 VQGESDANRSISVLLCPLSDGKVWYMRCDSSLVRVAKVPS*EG 66
V G S +I+V + DGK + CD+ LV V + P EG
Sbjct: 264 VMGASQNGSTITVEVEGAKDGKKQTLECDTLLVSVGRRPYTEG 306
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 25 GVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQSNTEILR 171
G +++ F + + D F EES Y T +S QS+ +LR
Sbjct: 1677 GAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLR 1725
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 25 GVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQSNTEILR 171
G +++ F + + D F EES Y T +S QS+ +LR
Sbjct: 1677 GAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLR 1725
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
F31D5.5 protein.
Length = 1788
Score = 27.5 bits (58), Expect = 4.6
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 37 INYGPFSSYAPSYDGTFATLTKEESHLI-YHTLPSESGQSNTEILRFASDSPWTAIYDME 213
I+YGP +AP D T TKE S ++ + S SG+ + + + IY +
Sbjct: 1267 IDYGPDFGFAPLNDTNRLTATKENSIIVPLDQVCSGSGEQVSHV--------FFTIYRHQ 1318
Query: 214 AMFPDKKQHQEQTSAPDDND 273
+F ++++ S+ +++D
Sbjct: 1319 KLFSGPQKYRNYGSSSEEDD 1338
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 27.5 bits (58), Expect = 4.6
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 37 INYGPFSSYAPSYDGTFATLTKEESHLI-YHTLPSESGQSNTEILRFASDSPWTAIYDME 213
I+YGP +AP D T TKE S ++ + S SG+ + + + IY +
Sbjct: 1236 IDYGPDFGFAPLNDTNRLTATKENSIIVPLDQVCSGSGEQVSHV--------FFTIYRHQ 1287
Query: 214 AMFPDKKQHQEQTSAPDDND 273
+F ++++ S+ +++D
Sbjct: 1288 KLFSGPQKYRNYGSSSEEDD 1307
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 25 GVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQSNTEILR 171
G +++ F + + D F EES Y T +S QS+ +LR
Sbjct: 1677 GAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLR 1725
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 25 GVKPINYGPFSSYAPSYDGTFATLTKEESHLIYHTLPSESGQSNTEILR 171
G +++ F + + D F EES Y T +S QS+ +LR
Sbjct: 1677 GAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLR 1725
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 277 IYHYHRVLRFVLDVVSCRGTWLP 209
+YH H +L FV++ V R T P
Sbjct: 136 VYHLHELLEFVMNDVPSRATLFP 158
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 277 IYHYHRVLRFVLDVVSCRGTWLP 209
+YH H +L FV++ V R T P
Sbjct: 191 VYHLHELLEFVMNDVPSRATLFP 213
>Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical
protein T06G6.2 protein.
Length = 339
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 25 GVKPINYGPFSSYAPSYDGTFATL 96
GV P+ Y PF +YAP F +
Sbjct: 173 GVPPLGYEPFCNYAPKLATNFVKI 196
>Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical
protein F22B5.6 protein.
Length = 223
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = -3
Query: 303 LFHVHFHFRYII-----IIGC*GLFLMLFLVG 223
LF HF FRY++ ++ C GLF+ +L+G
Sbjct: 102 LFKTHFTFRYVVFMNIAVVAC-GLFVTGYLLG 132
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 262 DDNDISKVKVDVEQLRSLTELGIDMEFLNDIEDEITASQHDYGISAALRH 411
D +D +++ E R++ + I++E LN+I D + Q D +RH
Sbjct: 738 DSSDREQLEYRAETFRNIRDKLIELERLNEIYDNHSRDQVDTPNRNLIRH 787
>AY126454-1|AAM95163.1| 555|Caenorhabditis elegans nesprin-like
protein protein.
Length = 555
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 262 DDNDISKVKVDVEQLRSLTELGIDMEFLNDIEDEITASQHDYGISAALRH 411
D +D +++ E R++ + I++E LN+I D + Q D +RH
Sbjct: 50 DSSDREQLEYRAETFRNIRDKLIELERLNEIYDNHSRDQVDTPNRNLIRH 99
>AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical
protein Y22D7AR.12 protein.
Length = 1137
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 138 RKWTE*YGNTPVRVGLALDSHLRHGSHVPR 227
+ WT+ + + +D HLRHG+ VP+
Sbjct: 224 KNWTQSIQSFKYLKHMFIDKHLRHGNSVPK 253
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 262 DDNDISKVKVDVEQLRSLTELGIDMEFLNDIEDEITASQHDYGISAALRH 411
D +D +++ E R++ + I++E LN+I D + Q D +RH
Sbjct: 738 DSSDREQLEYRAETFRNIRDKLIELERLNEIYDNHSRDQVDTPNRNLIRH 787
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.130 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,442,948
Number of Sequences: 27780
Number of extensions: 222764
Number of successful extensions: 547
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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