Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B15
         (443 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              23   1.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.5  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   3.5  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.0  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 280 KVKVDVEQLRSLTELGIDMEFLNDI 354
           K ++  EQ    TE GID +  ND+
Sbjct: 23  KTRLHTEQSVCKTETGIDQQKANDV 47


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 182 TRPGQPSTTWKPCSP 226
           T+P +P T  KP SP
Sbjct: 248 TKPPKPQTKTKPTSP 262


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 313 LTELGIDMEFLNDIEDEITASQHDYGISAALRHTHELIFKLEK 441
           LTE  +  +++N  E   T SQ  YG  A    +  + FKL +
Sbjct: 187 LTEYKLVEKWVNSSEIFYTTSQQYYGHFAGNFSSISITFKLAR 229


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 139 ESGQSNTEILRFASDSPWTAIYDME 213
           +SG++ +EIL  ++   W  IY  E
Sbjct: 243 QSGRAKSEILYKSTLHCWATIYKTE 267


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 139 ESGQSNTEILRFASDSPWTAIYDME 213
           +SG++ +EIL  ++   W  IY  E
Sbjct: 243 QSGRAKSEILYKSTLHCWATIYKTE 267


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 195 CPGRVRR 175
           CPGRVRR
Sbjct: 409 CPGRVRR 415


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.130    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,114
Number of Sequences: 438
Number of extensions: 3004
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)