Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B14
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.28 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.28 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   1.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   1.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   2.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   4.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   6.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 440  VPGLRHGDLGHFGAFYRRSLPSTES 366
            +P LRHGD+  F   YR +  S  S
Sbjct: 1031 LPELRHGDIQGFNVGYRETSSSNPS 1055


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 440  VPGLRHGDLGHFGAFYRRSLPSTES 366
            +P LRHGD+  F   YR +  S  S
Sbjct: 1027 LPELRHGDIQGFNVGYRETSSSNPS 1051


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 103 KIETTHRGFSLQALNV 56
           K+ETTH G SL  +N+
Sbjct: 453 KVETTHSGTSLFRINL 468


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 200 GYGLMLRRNRLWTSALEL 253
           GYG+ L++  LW  A+ L
Sbjct: 764 GYGIGLQKGSLWADAVTL 781


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 248 PKRSSRVGCAAASAHIHPH 192
           PKR + +G +A  A +H H
Sbjct: 200 PKRITLIGLSAGGASVHYH 218


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 248 PKRSSRVGCAAASAHIHPH 192
           PKR + +G +A  A +H H
Sbjct: 71  PKRITLIGLSAGGASVHYH 89


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 248 PKRSSRVGCAAASAHIHPH 192
           PKR + +G +A  A +H H
Sbjct: 200 PKRITLIGLSAGGASVHYH 218


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = -2

Query: 269 GNRTPPVPKRSSRVGCAAASAHIHPHMCAVVFITQTFQYGDV 144
           G+ TPP     +     A    + PH  A  F   +F Y  V
Sbjct: 757 GDETPPYGMELTEAEHYALYTAMAPHATASEFDEMSFYYSPV 798


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 272 PGNRTPPVPKRSSRVGCAAASAH 204
           PG+ +PPV +  S       S H
Sbjct: 273 PGHGSPPVKQHRSSSASTTCSGH 295


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,713
Number of Sequences: 438
Number of extensions: 3242
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)