Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B11
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 144 2e-34
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 144 2e-34
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 134 2e-31
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 122 8e-28
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 95 1e-19
AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein. 31 2.7
AK092587-1|BAC03920.1| 251|Homo sapiens protein ( Homo sapiens ... 30 6.2
U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein L... 30 8.2
BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcript... 30 8.2
BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcript... 30 8.2
BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcript... 30 8.2
BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein. 30 8.2
AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcript... 30 8.2
AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcript... 30 8.2
AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcript... 30 8.2
AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcript... 30 8.2
AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein... 30 8.2
AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein... 30 8.2
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (350), Expect = 2e-34
Identities = 77/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L GV R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 144 bits (349), Expect = 2e-34
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 431 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 134 bits (325), Expect = 2e-31
Identities = 74/173 (42%), Positives = 96/173 (55%), Gaps = 7/173 (4%)
Frame = +2
Query: 89 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 256
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 257 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 430
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GR GK
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVVF 165
Query: 431 XXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 166 LKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 218
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 122 bits (295), Expect = 8e-28
Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Frame = +2
Query: 113 VLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYP 292
+ S+ MY +K Y V K +GG+KNGGTR V L+ +YP
Sbjct: 60 ICHVSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 293 TQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTG 466
T+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR T
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTD 177
Query: 467 PFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
++ PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 178 LWSSIEVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 95.5 bits (227), Expect = 1e-19
Identities = 56/157 (35%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
Frame = +2
Query: 122 FSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYPTQD 301
+S+ MY +K Y V K +GG+KNGGTR V L+ +YPT+D
Sbjct: 2 YSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 302 KIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFA 475
R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR TGP
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLV 119
Query: 476 FNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 586
+ + K K+P HL DAYF
Sbjct: 120 SIEFLYEEHTRNLSLPLQPKSISAIVKIPKHLTDAYF 156
>AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein.
Length = 758
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 441 GNTPTSTTRLPACLPANRMHTVPGVRLGLVLRTCLLKLL 325
G TP+ T+ N+ TV VR G+ L CL+K L
Sbjct: 411 GGTPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKAL 449
>AK092587-1|BAC03920.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ35268 fis, clone PROST2005285, weakly similar to
CYCLIN G-ASSOCIATED KINASE (EC 2.7.1.-). ).
Length = 251
Score = 30.3 bits (65), Expect = 6.2
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +1
Query: 409 WQACRARWSVAEWSATLH-WTFCFQRVS-PAQDSAALCHWNID*GRPGRFQATGA 567
W C A WS +AT H W+ C S Q C W R G +A GA
Sbjct: 122 WSICCALWSRRLQTATFHPWSICCTTWSRRLQTGTCHCRWAWQPSRTGWPEARGA 176
>U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein
LMX1B/LMX1.2 protein.
Length = 161
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 81 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 137
Query: 319 RT 314
T
Sbjct: 138 ET 139
>BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 319 RT 314
T
Sbjct: 232 ET 233
>BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 319 RT 314
T
Sbjct: 232 ET 233
>BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 319 RT 314
T
Sbjct: 232 ET 233
>BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein.
Length = 377
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 173 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 229
Query: 319 RT 314
T
Sbjct: 230 ET 231
>AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 319 RT 314
T
Sbjct: 232 ET 233
>AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 319 RT 314
T
Sbjct: 255 ET 256
>AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 319 RT 314
T
Sbjct: 232 ET 233
>AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 319 RT 314
T
Sbjct: 255 ET 256
>AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein
protein.
Length = 379
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 319 RT 314
T
Sbjct: 232 ET 233
>AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein
LMX1B protein.
Length = 372
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 499 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 320
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 319 RT 314
T
Sbjct: 232 ET 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,954,207
Number of Sequences: 237096
Number of extensions: 2047412
Number of successful extensions: 8437
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8403
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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