Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B10
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    24   2.4  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   4.2  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   5.6  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.4  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 101 RTSRSGLCQPICCGSTVPENRSSLNIL 181
           R S+ G C P C    +P +++S  IL
Sbjct: 78  RESKEGKCIPKCSNENMPLSKTSTAIL 104


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 3   TRISSGSLRLQFGCAPVQK*FQNFCHQEKK*NDGQA 110
           TR   G+  +Q GC    +    +C Q +K N G +
Sbjct: 43  TRDPEGNENVQRGCTTEHEQLPLYCSQNQKPNTGDS 78


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 5   EDFFWFSTSTVWLCTSSKIISKFLPSGK 88
           E  +W+    +W+  ++KII  FL S K
Sbjct: 497 ETVYWYGLDPLWMLATNKII--FLNSFK 522


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 258 LFPNTFIFH*FPHFTSFFGYF 196
           L PNTF F+  P      GYF
Sbjct: 301 LTPNTFFFYMLPPIILDAGYF 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,259
Number of Sequences: 2352
Number of extensions: 7266
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)