Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B09
         (250 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   8.8  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    21   8.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    21   8.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 166  NTRALIHKTLVNFT 207
            NT   IH+T+++FT
Sbjct: 2807 NTIGTIHQTVISFT 2820


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 65  KWYFNERHINN 97
           +WY N+R I N
Sbjct: 130 RWYLNKRKIRN 140


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 191  LW*TLHSVHNII 226
            LW  +HSVH I+
Sbjct: 1991 LWMVVHSVHGIM 2002


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,987
Number of Sequences: 2352
Number of extensions: 5321
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)