Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B09
(250 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical pr... 26 3.1
AL023856-8|CAA19565.2| 326|Caenorhabditis elegans Hypothetical ... 26 4.1
AL032636-1|CAA21605.1| 343|Caenorhabditis elegans Hypothetical ... 25 5.4
Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical pr... 25 7.1
U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z83731-3|CAB06020.2| 248|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81123-5|CAB76411.2| 393|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z50071-9|CAA90404.3| 393|Caenorhabditis elegans Hypothetical pr... 25 9.4
U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical pr... 25 9.4
>Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical
protein T07C5.1c protein.
Length = 523
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -2
Query: 231 RWIILCTECKVHQSFVY*SSRVLNFMPFSNSS 136
RW+ C +H SF+ ++++L + P + S
Sbjct: 7 RWMFFCLTALLHGSFIVNAAKILVYCPSISKS 38
>Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical
protein T07C5.1b protein.
Length = 190
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -2
Query: 231 RWIILCTECKVHQSFVY*SSRVLNFMPFSNSS 136
RW+ C +H SF+ ++++L + P + S
Sbjct: 7 RWMFFCLTALLHGSFIVNAAKILVYCPSISKS 38
>AL023856-8|CAA19565.2| 326|Caenorhabditis elegans Hypothetical
protein Y94A7B.3 protein.
Length = 326
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -1
Query: 181 LKLSCFEFHAFQ*F--FNVSFFENPLCC 104
+K S F FH F F+VSFF P C
Sbjct: 45 VKWSLFSFHFFSALMDFSVSFFVQPFVC 72
>AL032636-1|CAA21605.1| 343|Caenorhabditis elegans Hypothetical
protein Y40B1B.3 protein.
Length = 343
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 122 KKTYIEELLKGMKFKTREL 178
+ TYIEE+LKG+ ++T +
Sbjct: 262 ESTYIEEVLKGIHYQTEPI 280
>Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical
protein C03E10.3 protein.
Length = 386
Score = 25.0 bits (52), Expect = 7.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -1
Query: 175 LSCFEFHAFQ*FFNVSFFENPL---CCVLIVNMPFIEIPFRYMYYSF 44
+SCF + FFN+ F E C + I+ + +I + Y+Y F
Sbjct: 324 VSCFLLKVIKMFFNIQFREPSFSNNCFLNILYLSSNQITYIYLYLFF 370
>U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical
protein C53B7.7 protein.
Length = 437
Score = 25.0 bits (52), Expect = 7.1
Identities = 7/32 (21%), Positives = 18/32 (56%)
Frame = -1
Query: 139 FNVSFFENPLCCVLIVNMPFIEIPFRYMYYSF 44
+N++F + +CC + FI ++Y + ++
Sbjct: 82 YNINFRRSHICCHFFCKLLFIYYDYQYRFINY 113
>Z83731-3|CAB06020.2| 248|Caenorhabditis elegans Hypothetical
protein M04C9.2 protein.
Length = 248
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 151 RHEIQNTRALIHKTLVNFTLGAQYYPTMR 237
+ EI+N R +HK V++ A+ P +R
Sbjct: 73 KEEIENVRFTVHKFPVSYETVAEKVPELR 101
>Z81123-5|CAB76411.2| 393|Caenorhabditis elegans Hypothetical
protein T07D4.1 protein.
Length = 393
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 151 FQ*FFNVSFFENPLCCVLIVNMPFIEIPFRYMY 53
F+ N + ++P C V ++ PF++IP +Y
Sbjct: 10 FRIISNATLDDDP-CSVSFIDQPFVKIPVMIIY 41
>Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical
protein T20D3.8 protein.
Length = 282
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 87 CLSLKYHLDICIIHFILFL 31
C++ HLD+ ++F+LFL
Sbjct: 50 CMNFLTHLDMITMYFVLFL 68
>Z50071-9|CAA90404.3| 393|Caenorhabditis elegans Hypothetical
protein T07D4.1 protein.
Length = 393
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 151 FQ*FFNVSFFENPLCCVLIVNMPFIEIPFRYMY 53
F+ N + ++P C V ++ PF++IP +Y
Sbjct: 10 FRIISNATLDDDP-CSVSFIDQPFVKIPVMIIY 41
>U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical
protein B0244.10 protein.
Length = 628
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 112 LCCVLIVNMPFIEIPFRYMYYSF 44
LC ++I + FI+IPFR + F
Sbjct: 375 LCIIIIQSTYFIDIPFRDTFAFF 397
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,871,035
Number of Sequences: 27780
Number of extensions: 109785
Number of successful extensions: 204
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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