Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B09
         (250 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   0.57 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   1.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   2.3  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   3.1  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   3.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   4.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   4.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   5.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   5.3  

>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 0.57
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 99  NTQHNGFSKKLTLKNY 146
           N  +N ++KKL  KNY
Sbjct: 335 NNNYNNYNKKLYYKNY 350


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 99  NTQHNGFSKKLTLKNY 146
           N  +N ++KKL  KNY
Sbjct: 105 NYNNNNYNKKLYYKNY 120


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +2

Query: 119  FKKTYIEELLK 151
            FKKTY+++L++
Sbjct: 1042 FKKTYVQDLIQ 1052


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 108 HNGFSKKLTLKNY 146
           +N ++KKL  KNY
Sbjct: 97  YNNYNKKLYYKNY 109


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 108 HNGFSKKLTLKNY 146
           +N ++KKL  KNY
Sbjct: 333 YNNYNKKLYYKNY 345


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +1

Query: 115 DFQKNLH*RITERHEIQ---NTRALIHKTLVNFTLGAQYYPTMRIQ 243
           +F   LH ++  R+ ++   N    +    ++  +   YYPTMR +
Sbjct: 256 EFYFFLHKQVLNRYYLERLSNDMGEVSYVSLDHPIPTGYYPTMRFR 301


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +1

Query: 115 DFQKNLH*RITERHEIQ---NTRALIHKTLVNFTLGAQYYPTMRIQ 243
           +F   LH ++  R+ ++   N    +    ++  +   YYPTMR +
Sbjct: 256 EFYFFLHKQVLNRYYLERLSNDMGEVSYVSLDHPIPTGYYPTMRFR 301


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 28  HKEENEMNNTY 60
           HK+E +MN TY
Sbjct: 674 HKDEFDMNITY 684


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 28  HKEENEMNNTY 60
           HK+E +MN TY
Sbjct: 674 HKDEFDMNITY 684


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,967
Number of Sequences: 438
Number of extensions: 1255
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)