Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B08
(491 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 33 0.12
06_01_0293 - 2139421-2139600,2139716-2140471,2140830-2140935,214... 32 0.22
09_04_0440 - 17605405-17605476,17605558-17605629,17606014-176062... 31 0.50
03_02_0577 - 9590096-9590432,9590680-9590750,9590890-9590983,959... 30 1.2
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 1.5
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 29 2.0
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 29 2.0
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 28 3.5
04_03_1015 - 21734381-21736534 28 3.5
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 28 3.5
07_03_0963 + 22949898-22949985,22950295-22950364,22951204-229512... 28 4.7
02_05_0820 + 32017814-32017961,32018046-32018281,32018847-320189... 28 4.7
04_01_0272 + 3624910-3625247,3625286-3625853,3625920-3626895,362... 27 6.2
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522... 27 6.2
10_08_0424 - 17803984-17805270 27 8.2
07_03_0532 + 19171290-19171394,19173122-19173302,19173761-191742... 27 8.2
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +3
Query: 195 KESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAA- 371
KE LL+E LEN + ++ ++ L+ NKI K+ + +N+ EV LT +L++
Sbjct: 990 KEQSLLSE-LENIFQEHKEHEERIDRVHLLLNKIEKEKTVELSNLEREVISLTAQLSSTE 1048
Query: 372 ----SGKLSSINELADQALKRAKV 431
S L +I E++ +AK+
Sbjct: 1049 EERESSTLDTIREVSILRADKAKL 1072
>06_01_0293 -
2139421-2139600,2139716-2140471,2140830-2140935,
2140999-2141249,2141342-2141443,2141557-2141876,
2142350-2142546,2143668-2143786,2143876-2143997,
2144877-2145081
Length = 785
Score = 32.3 bits (70), Expect = 0.22
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Frame = +3
Query: 42 VSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRS---DQFGKQSV-DMSALAKES-- 203
+SN +DT+ + I+S + K+ NR D + SV DM+ K S
Sbjct: 261 ISNHDDTVLTSSHSINSETRFSSSSSGNSIYKSFNRDRSFDNSDQASVSDMATNLKHSHD 320
Query: 204 ----RLLAEKLENEARNIRDIADKAFNTSLVAN-KIAKDGITKQANISNEVQILTNEL 362
+L E+L + R+++ + + A SL AN K+ K GI +I +E+++ EL
Sbjct: 321 QEYLKLEIERLRVKLRHLQKLNELAQKESLDANQKLHKLGI---QDIEDEIKLKETEL 375
>09_04_0440 -
17605405-17605476,17605558-17605629,17606014-17606277,
17607106-17607510
Length = 270
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -2
Query: 103 YSIALLISFWAASIVSSALDTLPLL 29
Y + L++ W +SIV SALD++PL+
Sbjct: 200 YGTSALVTIWISSIVVSALDSVPLV 224
>03_02_0577 -
9590096-9590432,9590680-9590750,9590890-9590983,
9591070-9591137,9591230-9591296,9591436-9591566,
9591774-9591847,9592017-9592092,9594082-9594147,
9595432-9595498,9595785-9595861,9596701-9596806,
9596906-9596979,9597587-9597682,9597781-9597972,
9598051-9598200
Length = 581
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +3
Query: 168 QSVDMSALAKESRLLAE--KLENEARNIRDIADKAFNTSLVANKIAKD-GITKQANISNE 338
+S S +K S+ +AE KL+ + ++ + A KA ++ N++ K+ + + +NE
Sbjct: 190 RSNSTSRRSKASQTVAEVNKLKVLSESLANSAAKA-ERRIMENRLQKEESLIFRVTKTNE 248
Query: 339 VQILTNELNAASGKLSSINELADQALKRAKVVYE 440
V + E+ A L +L + LK+ VYE
Sbjct: 249 VSVTEKEILAEISGLQKQKDLLEDELKKCWSVYE 282
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 18 AVEKSKGNVSNAEDTIEAAQKEISSAME----YXXXXXXXXXXKARNRSDQFGKQSVDMS 185
A++ S+A+ ++ +KEI + E Y K+R ++F + S MS
Sbjct: 550 ALDAKFKEASDADKKVQELEKEILDSREKTEFYRTKMQELILYKSRC-DNRFNEVSERMS 608
Query: 186 ALAKESRLLAEKLENEARNIRDIADK 263
A +E + LA K + + + D+A K
Sbjct: 609 ADKREVQSLAAKYDERCKKVGDVASK 634
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 288 NKIAKDGITKQANISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 449
+K AK I ++++ NE+N + + SS+ A Q L+RA+ EAL
Sbjct: 182 HKRAKQRIQDIQKEKDDMEARFNEINQKAEQASSLQSAAQQELERARQQASEAL 235
>01_05_0740 -
24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +3
Query: 171 SVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANK-IAK-DGITKQANISNEVQ 344
SV + A+ E ++A LE IR D N L +K I K + QA + ++
Sbjct: 441 SVLVQAMCLEKLVIAPDLEI----IRKYIDDGMNALLFPSKNIGKLTQVLLQAVSNGKIS 496
Query: 345 ILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEV 467
+L ++ A++GK+ + N +A + ++ V+ E + AEV
Sbjct: 497 VLGQKI-ASAGKVHAKNLMASETIEGYAVLLENVIKFPAEV 536
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 411 PDQPARLYCLTYLKLRSAHSLISVLHCLCW 322
P+ P LY + K + S SVL C+CW
Sbjct: 621 PELPLTLYFIRMYKRYNRASYNSVLSCVCW 650
>04_03_1015 - 21734381-21736534
Length = 717
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = -2
Query: 145 LRAFANAAAPSPSKYSIALLISFWAASIVSSALDTLPLLFSTASLPS 5
+ A A AAA + + SI+ L+ AA + +ALD LP +S++ +PS
Sbjct: 1 MAAAAAAAAAASTASSISALV---AAGRLFAALDALPPSYSSSQVPS 44
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 216 EKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELN 365
++LENE R+ AD N L +++ + KQA+ E++ NELN
Sbjct: 579 QRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKENELN 628
>07_03_0963 +
22949898-22949985,22950295-22950364,22951204-22951270,
22951361-22951456,22951796-22951893,22951921-22952089,
22952899-22952940,22953967-22954023,22954116-22954166,
22954284-22954340,22954522-22954539
Length = 270
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = +3
Query: 189 LAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNA 368
LAK LAE+ + RNIR A KA++ K+++D + ++S ++Q +T+E
Sbjct: 198 LAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNV---KDLSADLQKVTDEY-- 252
Query: 369 ASGKLSSINELADQALKR 422
K+ +I + +Q L +
Sbjct: 253 -MKKIEAIQKQKEQELMK 269
>02_05_0820 +
32017814-32017961,32018046-32018281,32018847-32018951,
32019222-32019293,32019373-32019429
Length = 205
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 151 DLLRAFANAAAPSPSKYSIALLISFWAASIVSSALDTLPLL 29
D+L P+ Y L+ W S V SA+D++PL+
Sbjct: 124 DILSKLDIQVTPTLVLYGSGALVVLWVLSSVVSAIDSIPLV 164
>04_01_0272 +
3624910-3625247,3625286-3625853,3625920-3626895,
3627053-3627087
Length = 638
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 104 IFHCTTDLFLGRFNRI 57
I+H T+LFL RFNR+
Sbjct: 446 IWHIATELFLSRFNRV 461
>02_01_0008 -
50576-50671,50767-50829,50918-50961,51048-51129,
52205-52371,52502-52654,52780-52960,53452-53540,
53599-53799,54804-55147,55397-55626
Length = 549
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 393 LYCLTYLKLRSAHSLISVLHCLCWL 319
L CL+YL + I V+ CLCW+
Sbjct: 341 LSCLSYLSAGGVIASILVVVCLCWV 365
>10_08_0424 - 17803984-17805270
Length = 428
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 166 FPN*SDLLRAFANAAAPSPSKYSI-ALLISFWAASIVSSALDTL 38
FP D LRAF+++A + S S+ ALL + + A V TL
Sbjct: 130 FPGPDDALRAFSDSAPAARSDVSLSALLSALFRAGRVDDVKSTL 173
>07_03_0532 +
19171290-19171394,19173122-19173302,19173761-19174245,
19174877-19176283,19176413-19176628
Length = 797
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 204 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 383
++L+E+L + +IR D S K+A++ + E+ L +LNAA+ K
Sbjct: 63 KVLSERLSSAVLDIRAKDDLVKQHS----KVAEEAVLGWEKAEKEIASLKTQLNAATAKN 118
Query: 384 SSINE 398
S++ +
Sbjct: 119 STLED 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,074,468
Number of Sequences: 37544
Number of extensions: 157012
Number of successful extensions: 649
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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