Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B08
         (491 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    87   4e-19
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         83   4e-18
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         83   4e-18
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         83   4e-18
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         83   4e-18
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.35 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   5.7  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   5.7  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 86.6 bits (205), Expect = 4e-19
 Identities = 50/161 (31%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
 Frame = +3

Query: 12   NEAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSAL 191
            N  + K   N + A   I+ A++++ +A+E           +A++ S   G Q+  +S +
Sbjct: 1131 NHKISKGGYNATLANGKIQDARRQLDNAIELLQTEGNTALARAKDISGHLGNQTNQISGI 1190

Query: 192  AKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI-LTNELNA 368
            ++E+R  A++ + EA      A +A   +  A K A D   +QANI+ E+   +++E+  
Sbjct: 1191 SREARQYADRFKAEADANMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQ 1250

Query: 369  ASGKLSSINELADQALKRAKVVYEEALGLYAEVNNTLLPDI 491
            A  KL+++++L +QAL RA+ V +EAL L+A VN T  P+I
Sbjct: 1251 AREKLNTVSKLTEQALTRAREVNDEALTLFAAVNRTAPPNI 1291



 Score = 30.3 bits (65), Expect = 0.037
 Identities = 34/165 (20%), Positives = 67/165 (40%), Gaps = 8/165 (4%)
 Frame = +3

Query: 21   VEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKE 200
            VE+S      A + +   +++I ++ +            +RN  D            A+E
Sbjct: 1391 VEESSRRAEEALNLVPNIERQIVNSRDLLQRAEEALYAASRNAEDARKNAQTAQDKYAEE 1450

Query: 201  SRLLAEKLENEARNIRDIA-DKAFNTSLVANKIAKDG---ITKQANISNEVQILTNELNA 368
            +  LAE ++  A   ++ A D       +  ++AK       ++A I  ++  LTNE   
Sbjct: 1451 ASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEEREAQIRKDLN-LTNEAKE 1509

Query: 369  ASGKLS-SINEL---ADQALKRAKVVYEEALGLYAEVNNTLLPDI 491
              G+   + NE     D+A++   ++  E   L  E++   L D+
Sbjct: 1510 KVGQAQLNSNEAKSQVDKAMREVSLIMSELANL-REIDVNSLDDL 1553


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 83.4 bits (197), Expect = 4e-18
 Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
 Frame = +3

Query: 39  NVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAE 218
           N + A   I+ A++++ +A+E           +A++ S   G Q+  +S +++E+R  A+
Sbjct: 1   NATLANGKIQDARRQLDNAIELLQTEGNTALARAKDISGHLGNQTNQISGISREARQYAD 60

Query: 219 KLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI-LTNELNAASGKLSSIN 395
           + + EA      A +A   +  A K A D   +QANI+ E+   +++E+  A  KL++++
Sbjct: 61  RFKAEADANMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVS 120

Query: 396 ELADQALKRAKVVYEEALGLYAEVNNTLLPDI 491
           +L +QAL RA+ V +EAL L+A VN T  P+I
Sbjct: 121 KLTEQALTRAREVNDEALTLFAAVNRTAPPNI 152


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 83.4 bits (197), Expect = 4e-18
 Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
 Frame = +3

Query: 39  NVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAE 218
           N + A   I+ A++++ +A+E           +A++ S   G Q+  +S +++E+R  A+
Sbjct: 1   NATLANGKIQDARRQLDNAIELLQTEGNTALARAKDISGHLGNQTNQISGISREARQYAD 60

Query: 219 KLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI-LTNELNAASGKLSSIN 395
           + + EA      A +A   +  A K A D   +QANI+ E+   +++E+  A  KL++++
Sbjct: 61  RFKAEADANMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVS 120

Query: 396 ELADQALKRAKVVYEEALGLYAEVNNTLLPDI 491
           +L +QAL RA+ V +EAL L+A VN T  P+I
Sbjct: 121 KLTEQALTRAREVNDEALTLFAAVNRTAPPNI 152


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 83.4 bits (197), Expect = 4e-18
 Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
 Frame = +3

Query: 39  NVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAE 218
           N + A   I+ A++++ +A+E           +A++ S   G Q+  +S +++E+R  A+
Sbjct: 1   NATLANGKIQDARRQLDNAIELLQTEGNTALARAKDISGHLGNQTNQISGISREARQYAD 60

Query: 219 KLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI-LTNELNAASGKLSSIN 395
           + + EA      A +A   +  A K A D   +QANI+ E+   +++E+  A  KL++++
Sbjct: 61  RFKAEADANMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVS 120

Query: 396 ELADQALKRAKVVYEEALGLYAEVNNTLLPDI 491
           +L +QAL RA+ V +EAL L+A VN T  P+I
Sbjct: 121 KLTEQALTRAREVNDEALTLFAAVNRTAPPNI 152


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 83.4 bits (197), Expect = 4e-18
 Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
 Frame = +3

Query: 39  NVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAE 218
           N + A   I+ A++++ +A+E           +A++ S   G Q+  +S +++E+R  A+
Sbjct: 1   NATLANGKIQDARRQLDNAIELLQTEGNTALARAKDISGHLGNQTNQISGISREARQYAD 60

Query: 219 KLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQI-LTNELNAASGKLSSIN 395
           + + EA      A +A   +  A K A D   +QANI+ E+   +++E+  A  KL++++
Sbjct: 61  RFKAEADANMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVS 120

Query: 396 ELADQALKRAKVVYEEALGLYAEVNNTLLPDI 491
           +L +QAL RA+ V +EAL L+A VN T  P+I
Sbjct: 121 KLTEQALTRAREVNDEALTLFAAVNRTAPPNI 152


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 21  VEKSKGNVSNAEDTIEAAQKEI 86
           V+KSK  +++ ED +EAAQ  I
Sbjct: 930 VQKSKDKINSMEDEVEAAQSAI 951


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 180 MSALAKESRLLAEKLENEARNIRDI 254
           M A A     LA K+E   R IRD+
Sbjct: 120 MEATAMSCICLASKIEEAPRRIRDV 144


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 180 MSALAKESRLLAEKLENEARNIRDI 254
           M A A     LA K+E   R IRD+
Sbjct: 120 MEATAMSCICLASKIEEAPRRIRDV 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,736
Number of Sequences: 2352
Number of extensions: 5672
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)