Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B08
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101727-1|AAI01728.1| 875|Homo sapiens minichromosome maintena... 36 0.076
BC009108-1|AAH09108.1| 353|Homo sapiens Unknown (protein for IM... 36 0.076
BC004876-1|AAH04876.2| 556|Homo sapiens MCM10 protein protein. 36 0.076
AL355355-14|CAI16558.1| 874|Homo sapiens MCM10 minichromosome m... 36 0.076
AL355355-13|CAI16557.1| 855|Homo sapiens MCM10 minichromosome m... 36 0.076
AL138764-8|CAI12913.1| 874|Homo sapiens MCM10 minichromosome ma... 36 0.076
AL138764-7|CAI12912.1| 855|Homo sapiens MCM10 minichromosome ma... 36 0.076
AB042719-1|BAB18723.1| 874|Homo sapiens MCM10 homolog protein. 36 0.076
M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein. 33 0.41
BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,... 33 0.41
BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,... 33 0.41
AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein p... 33 0.41
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 31 2.9
D00763-1|BAA00660.1| 261|Homo sapiens proteasome subunit C9 pro... 31 2.9
BT009784-1|AAP88786.1| 261|Homo sapiens proteasome (prosome, ma... 31 2.9
BC056249-1|AAH56249.1| 237|Homo sapiens PSMA4 protein protein. 31 2.9
BC047667-1|AAH47667.1| 261|Homo sapiens proteasome (prosome, ma... 31 2.9
BC022817-1|AAH22817.2| 260|Homo sapiens PSMA4 protein protein. 31 2.9
BC022445-1|AAH22445.1| 261|Homo sapiens proteasome (prosome, ma... 31 2.9
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 31 2.9
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 31 2.9
BC005361-1|AAH05361.1| 261|Homo sapiens proteasome (prosome, ma... 31 2.9
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 31 2.9
BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein. 30 3.8
BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-... 30 3.8
AB011137-1|BAA25491.2| 641|Homo sapiens KIAA0565 protein protein. 30 3.8
AY610514-1|AAT37906.1| 1302|Homo sapiens paracingulin protein. 30 5.0
Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of... 29 6.6
S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein. 29 6.6
D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein. 29 6.6
BC150266-1|AAI50267.1| 1336|Homo sapiens mitogen-activated prote... 29 6.6
BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural mainten... 29 6.6
BC080185-1|AAH80185.1| 417|Homo sapiens SMC1A protein protein. 29 6.6
BC064368-1|AAH64368.1| 847|Homo sapiens SMC1A protein protein. 29 6.6
AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance ... 29 6.6
AL031717-1|CAM26394.1| 1336|Homo sapiens mitogen-activated prote... 29 6.6
AL031710-1|CAM26364.1| 1336|Homo sapiens mitogen-activated prote... 29 6.6
AK024437-1|BAB15727.1| 260|Homo sapiens FLJ00027 protein protein. 29 6.6
AE006639-4|AAK61290.1| 1342|Homo sapiens similar to sperm specif... 29 6.6
AB028989-1|BAA83018.2| 1346|Homo sapiens KIAA1066 protein protein. 29 6.6
>BC101727-1|AAI01728.1| 875|Homo sapiens minichromosome maintenance
complex component 10 protein.
Length = 875
Score = 35.9 bits (79), Expect = 0.076
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQS-VDMSAL 191
E VEK+ S AED +E A+K+ + Y KA+++ K++ +M
Sbjct: 696 ERVEKNTMFSSQAEDELEPARKKRREQLAYLESEEFQKILKAKSKHTGILKEAEAEMQER 755
Query: 192 AKESRLLAEKLENEARNIRDI 254
E + E++E + RNIR++
Sbjct: 756 YFEPLVKKEQMEEKMRNIREV 776
>BC009108-1|AAH09108.1| 353|Homo sapiens Unknown (protein for
IMAGE:3451214) protein.
Length = 353
Score = 35.9 bits (79), Expect = 0.076
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQS-VDMSAL 191
E VEK+ S AED +E A+K+ + Y KA+++ K++ +M
Sbjct: 174 ERVEKNTMFSSQAEDELEPARKKRREQLAYLESEEFQKILKAKSKHTGILKEAEAEMQER 233
Query: 192 AKESRLLAEKLENEARNIRDI 254
E + E++E + RNIR++
Sbjct: 234 YFEPLVKKEQMEEKMRNIREV 254
>BC004876-1|AAH04876.2| 556|Homo sapiens MCM10 protein protein.
Length = 556
Score = 35.9 bits (79), Expect = 0.076
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQS-VDMSAL 191
E VEK+ S AED +E A+K+ + Y KA+++ K++ +M
Sbjct: 377 ERVEKNTMFSSQAEDELEPARKKRREQLAYLESEEFQKILKAKSKHTGILKEAEAEMQER 436
Query: 192 AKESRLLAEKLENEARNIRDI 254
E + E++E + RNIR++
Sbjct: 437 YFEPLVKKEQMEEKMRNIREV 457
>AL355355-14|CAI16558.1| 874|Homo sapiens MCM10 minichromosome
maintenance deficient 10 (S., yeast) protein.
Length = 874
Score = 35.9 bits (79), Expect = 0.076
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQS-VDMSAL 191
E VEK+ S AED +E A+K+ + Y KA+++ K++ +M
Sbjct: 695 ERVEKNTMFSSQAEDELEPARKKRREQLAYLESEEFQKILKAKSKHTGILKEAEAEMQER 754
Query: 192 AKESRLLAEKLENEARNIRDI 254
E + E++E + RNIR++
Sbjct: 755 YFEPLVKKEQMEEKMRNIREV 775
>AL355355-13|CAI16557.1| 855|Homo sapiens MCM10 minichromosome
maintenance deficient 10 (S.din G/H synthase and
cyclooxyg protein.
Length = 855
Score = 35.9 bits (79), Expect = 0.076
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQS-VDMSAL 191
E VEK+ S AED +E A+K+ + Y KA+++ K++ +M
Sbjct: 695 ERVEKNTMFSSQAEDELEPARKKRREQLAYLESEEFQKILKAKSKHTGILKEAEAEMQER 754
Query: 192 AKESRLLAEKLENEARNIRDI 254
E + E++E + RNIR++
Sbjct: 755 YFEPLVKKEQMEEKMRNIREV 775
>AL138764-8|CAI12913.1| 874|Homo sapiens MCM10 minichromosome
maintenance deficient 10 (S.nt regulator of chromatin,
sub protein.
Length = 874
Score = 35.9 bits (79), Expect = 0.076
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQS-VDMSAL 191
E VEK+ S AED +E A+K+ + Y KA+++ K++ +M
Sbjct: 695 ERVEKNTMFSSQAEDELEPARKKRREQLAYLESEEFQKILKAKSKHTGILKEAEAEMQER 754
Query: 192 AKESRLLAEKLENEARNIRDI 254
E + E++E + RNIR++
Sbjct: 755 YFEPLVKKEQMEEKMRNIREV 775
>AL138764-7|CAI12912.1| 855|Homo sapiens MCM10 minichromosome
maintenance deficient 10 (S.nt regulator of chromatin,
sub protein.
Length = 855
Score = 35.9 bits (79), Expect = 0.076
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQS-VDMSAL 191
E VEK+ S AED +E A+K+ + Y KA+++ K++ +M
Sbjct: 695 ERVEKNTMFSSQAEDELEPARKKRREQLAYLESEEFQKILKAKSKHTGILKEAEAEMQER 754
Query: 192 AKESRLLAEKLENEARNIRDI 254
E + E++E + RNIR++
Sbjct: 755 YFEPLVKKEQMEEKMRNIREV 775
>AB042719-1|BAB18723.1| 874|Homo sapiens MCM10 homolog protein.
Length = 874
Score = 35.9 bits (79), Expect = 0.076
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQS-VDMSAL 191
E VEK+ S AED +E A+K+ + Y KA+++ K++ +M
Sbjct: 695 ERVEKNTMFSSQAEDELEPARKKRREQLAYLESEEFQKILKAKSKHTGILKEAEAEMQER 754
Query: 192 AKESRLLAEKLENEARNIRDI 254
E + E++E + RNIR++
Sbjct: 755 YFEPLVKKEQMEEKMRNIREV 775
>M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein.
Length = 1976
Score = 33.5 bits (73), Expect = 0.41
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSA-- 188
E ++ K N+ + +E KE++ ++ K + Q + +S
Sbjct: 1213 EQAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELHAKVSEGD 1272
Query: 189 -LAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELN 365
L E A KL+NE N+ + ++A + K AKD + ++ + + ++L E
Sbjct: 1273 RLRVELAEKASKLQNELDNVSTLLEEAEKKGI---KFAKDAASLESQLQDTQELLQEETR 1329
Query: 366 AASGKLSSINELADQ--ALKRAKVVYEEA 446
S I +L ++ +L+ + EEA
Sbjct: 1330 QKLNLSSRIRQLEEEKNSLQEQQEEEEEA 1358
>BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 33.5 bits (73), Expect = 0.41
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSA-- 188
E ++ K N+ + +E KE++ ++ K + Q + +S
Sbjct: 1213 EQAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELHAKVSEGD 1272
Query: 189 -LAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELN 365
L E A KL+NE N+ + ++A + K AKD + ++ + + ++L E
Sbjct: 1273 RLRVELAEKASKLQNELDNVSTLLEEAEKKGI---KFAKDAASLESQLQDTQELLQEETR 1329
Query: 366 AASGKLSSINELADQ--ALKRAKVVYEEA 446
S I +L ++ +L+ + EEA
Sbjct: 1330 QKLNLSSRIRQLEEEKNSLQEQQEEEEEA 1358
>BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 33.5 bits (73), Expect = 0.41
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSA-- 188
E ++ K N+ + +E KE++ ++ K + Q + +S
Sbjct: 1213 EQAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELHAKVSEGD 1272
Query: 189 -LAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELN 365
L E A KL+NE N+ + ++A + K AKD + ++ + + ++L E
Sbjct: 1273 RLRVELAEKASKLQNELDNVSTLLEEAEKKGI---KFAKDAASLESQLQDTQELLQEETR 1329
Query: 366 AASGKLSSINELADQ--ALKRAKVVYEEA 446
S I +L ++ +L+ + EEA
Sbjct: 1330 QKLNLSSRIRQLEEEKNSLQEQQEEEEEA 1358
>AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein
protein.
Length = 2018
Score = 33.5 bits (73), Expect = 0.41
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSA-- 188
E ++ K N+ + +E KE++ ++ K + Q + +S
Sbjct: 1255 EQAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELHAKVSEGD 1314
Query: 189 -LAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELN 365
L E A KL+NE N+ + ++A + K AKD + ++ + + ++L E
Sbjct: 1315 RLRVELAEKASKLQNELDNVSTLLEEAEKKGI---KFAKDAASLESQLQDTQELLQEETR 1371
Query: 366 AASGKLSSINELADQ--ALKRAKVVYEEA 446
S I +L ++ +L+ + EEA
Sbjct: 1372 QKLNLSSRIRQLEEEKNSLQEQQEEEEEA 1400
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Frame = +3
Query: 141 RNRSDQFGKQSVD-MSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITK 317
+ ++++ KQ D ++A+ K+ + ++L+ + ++D +K +A K A D +
Sbjct: 30 QKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLE----LAEKKAADAEAE 85
Query: 318 QANISNEVQILTNELNAASG-------KLSSINELADQALKRAKVVYEEAL 449
A+++ +Q++ EL+ A KL + AD++ + KV+ AL
Sbjct: 86 VASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAL 136
>D00763-1|BAA00660.1| 261|Homo sapiens proteasome subunit C9
protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANIS 332
+ G + LA + LLA E RNI + D+ F + + K+ +D A I+
Sbjct: 26 EAIGHAGTCLGILANDGVLLAA----ERRNIHKLLDEVFFSEKIY-KLNEDMACSVAGIT 80
Query: 333 NEVQILTNEL 362
++ +LTNEL
Sbjct: 81 SDANVLTNEL 90
>BT009784-1|AAP88786.1| 261|Homo sapiens proteasome (prosome,
macropain) subunit, alpha type, 4 protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANIS 332
+ G + LA + LLA E RNI + D+ F + + K+ +D A I+
Sbjct: 26 EAIGHAGTCLGILANDGVLLAA----ERRNIHKLLDEVFFSEKIY-KLNEDMACSVAGIT 80
Query: 333 NEVQILTNEL 362
++ +LTNEL
Sbjct: 81 SDANVLTNEL 90
>BC056249-1|AAH56249.1| 237|Homo sapiens PSMA4 protein protein.
Length = 237
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANIS 332
+ G + LA + LLA E RNI + D+ F + + K+ +D A I+
Sbjct: 2 EAIGHAGTCLGILANDGVLLAA----ERRNIHKLLDEVFFSEKIY-KLNEDMACSVAGIT 56
Query: 333 NEVQILTNEL 362
++ +LTNEL
Sbjct: 57 SDANVLTNEL 66
>BC047667-1|AAH47667.1| 261|Homo sapiens proteasome (prosome,
macropain) subunit, alpha type, 4 protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANIS 332
+ G + LA + LLA E RNI + D+ F + + K+ +D A I+
Sbjct: 26 EAIGHAGTCLGILANDGVLLAA----ERRNIHKLLDEVFFSEKIY-KLNEDMACSVAGIT 80
Query: 333 NEVQILTNEL 362
++ +LTNEL
Sbjct: 81 SDANVLTNEL 90
>BC022817-1|AAH22817.2| 260|Homo sapiens PSMA4 protein protein.
Length = 260
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANIS 332
+ G + LA + LLA E RNI + D+ F + + K+ +D A I+
Sbjct: 25 EAIGHAGTCLGILANDGVLLAA----ERRNIHKLLDEVFFSEKIY-KLNEDMACSVAGIT 79
Query: 333 NEVQILTNEL 362
++ +LTNEL
Sbjct: 80 SDANVLTNEL 89
>BC022445-1|AAH22445.1| 261|Homo sapiens proteasome (prosome,
macropain) subunit, alpha type, 4 protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANIS 332
+ G + LA + LLA E RNI + D+ F + + K+ +D A I+
Sbjct: 26 EAIGHAGTCLGILANDGVLLAA----ERRNIHKLLDEVFFSEKIY-KLNEDMACSVAGIT 80
Query: 333 NEVQILTNEL 362
++ +LTNEL
Sbjct: 81 SDANVLTNEL 90
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Frame = +3
Query: 141 RNRSDQFGKQSVD-MSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITK 317
+ ++++ KQ D ++A+ K+ + ++L+ + ++D +K +A K A D +
Sbjct: 30 QKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLE----LAEKKAADAEAE 85
Query: 318 QANISNEVQILTNELNAASG-------KLSSINELADQALKRAKVVYEEAL 449
A+++ +Q++ EL+ A KL + AD++ + KV+ AL
Sbjct: 86 VASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAL 136
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Frame = +3
Query: 141 RNRSDQFGKQSVD-MSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITK 317
+ ++++ KQ D ++A+ K+ + ++L+ + ++D +K +A K A D +
Sbjct: 30 QKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLE----LAEKKAADAEAE 85
Query: 318 QANISNEVQILTNELNAASG-------KLSSINELADQALKRAKVVYEEAL 449
A+++ +Q++ EL+ A KL + AD++ + KV+ AL
Sbjct: 86 VASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAL 136
>BC005361-1|AAH05361.1| 261|Homo sapiens proteasome (prosome,
macropain) subunit, alpha type, 4 protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANIS 332
+ G + LA + LLA E RNI + D+ F + + K+ +D A I+
Sbjct: 26 EAIGHAGTCLGILANDGVLLAA----ERRNIHKLLDEVFFSEKIY-KLNEDMACSVAGIT 80
Query: 333 NEVQILTNEL 362
++ +LTNEL
Sbjct: 81 SDANVLTNEL 90
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Frame = +3
Query: 141 RNRSDQFGKQSVD-MSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITK 317
+ ++++ KQ D ++A+ K+ + ++L+ + ++D +K +A K A D +
Sbjct: 29 QKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLE----LAEKKAADAEAE 84
Query: 318 QANISNEVQILTNELNAASG-------KLSSINELADQALKRAKVVYEEAL 449
A+++ +Q++ EL+ A KL + AD++ + KV+ AL
Sbjct: 85 VASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAL 135
>BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein.
Length = 1427
Score = 30.3 bits (65), Expect = 3.8
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKA---RNRSDQF---GKQS 173
N +E K N E +E+ + +++A+ K R R + K
Sbjct: 896 NSELENGKQNQERLEIEMESYRCRLAAAVRDCDQSQTARDLKLDFQRTRQEWVRLHDKMK 955
Query: 174 VDMSALAKESRLLAEKLENEARNIRDIADKAFNT 275
VDMS L ++ +L+EKL N I + + NT
Sbjct: 956 VDMSGLQAKNEILSEKLSNAESKINSLQIQLHNT 989
>BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated,
coiled-coil containing protein kinase 1 protein.
Length = 1354
Score = 30.3 bits (65), Expect = 3.8
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 315 KQANISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNNT 476
K+ N+ NEV L N+L K+S ++LA++ L + + EEA L ++T
Sbjct: 508 KRRNVENEVSTLKNQLEDLK-KVSQNSQLANEKLSQLQKQLEEANDLLRTESDT 560
>AB011137-1|BAA25491.2| 641|Homo sapiens KIAA0565 protein protein.
Length = 641
Score = 30.3 bits (65), Expect = 3.8
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKA---RNRSDQF---GKQS 173
N +E K N E +E+ + +++A+ K R R + K
Sbjct: 200 NSELENGKQNQERLEIEMESYRCRLAAAVRDCDQSQTARDLKLDFQRTRQEWVRLHDKMK 259
Query: 174 VDMSALAKESRLLAEKLENEARNIRDIADKAFNT 275
VDMS L ++ +L+EKL N I + + NT
Sbjct: 260 VDMSGLQAKNEILSEKLSNAESKINSLQIQLHNT 293
>AY610514-1|AAT37906.1| 1302|Homo sapiens paracingulin protein.
Length = 1302
Score = 29.9 bits (64), Expect = 5.0
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = +3
Query: 60 TIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEKLENEAR 239
TIE QKE++ +E + ++ ++ +M KE L AEK A
Sbjct: 949 TIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAM 1008
Query: 240 NIRDIADKAFNTSLVANKIAKD-GITKQANISNEVQILTNELNAASGKLSSINELADQAL 416
++D + L + A+D +TK+ + ++ L EL A S + L Q
Sbjct: 1009 KMQD-GMRLMEEELRDYQRAQDEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQ-- 1065
Query: 417 KRAKVVYEEALGLYAEVNNT 476
AKV E + L E NN+
Sbjct: 1066 MEAKVSQLE-MELEEERNNS 1084
>Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAM---EYXXXXXXXXXXKARNRSDQFGKQSVDM 182
N+ +EK K + ED ++ +KE+ M + + + Q+ K +
Sbjct: 246 NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENT 305
Query: 183 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNEL 362
S K+ + L+N ++ + + K + + E Q +L
Sbjct: 306 SHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 363 NAASGKLSSINELADQALKRAKVVYEE 443
++ + L ++A KRA + +E
Sbjct: 366 TLEENQVKKYHRLKEEASKRAATLAQE 392
>S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein.
Length = 1233
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAM---EYXXXXXXXXXXKARNRSDQFGKQSVDM 182
N+ +EK K + ED ++ +KE+ M + + + Q+ K +
Sbjct: 246 NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENT 305
Query: 183 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNEL 362
S K+ + L+N ++ + + K + + E Q +L
Sbjct: 306 SHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 363 NAASGKLSSINELADQALKRAKVVYEE 443
++ + L ++A KRA + +E
Sbjct: 366 TLEENQVKKYHRLKEEASKRAATLAQE 392
>D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein.
Length = 1233
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAM---EYXXXXXXXXXXKARNRSDQFGKQSVDM 182
N+ +EK K + ED ++ +KE+ M + + + Q+ K +
Sbjct: 246 NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENT 305
Query: 183 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNEL 362
S K+ + L+N ++ + + K + + E Q +L
Sbjct: 306 SHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 363 NAASGKLSSINELADQALKRAKVVYEE 443
++ + L ++A KRA + +E
Sbjct: 366 TLEENQVKKYHRLKEEASKRAATLAQE 392
>BC150266-1|AAI50267.1| 1336|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 3 protein.
Length = 1336
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 54 EDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
ED +E +KE+ +E+ KA+N +DQ + S + KE L ++
Sbjct: 112 EDALEQEKKELQIQVEHYEFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQR 167
>BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural
maintenance of chromosomes 1-like 1 protein.
Length = 1233
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAM---EYXXXXXXXXXXKARNRSDQFGKQSVDM 182
N+ +EK K + ED ++ +KE+ M + + + Q+ K +
Sbjct: 246 NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENT 305
Query: 183 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNEL 362
S K+ + L+N ++ + + K + + E Q +L
Sbjct: 306 SHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 363 NAASGKLSSINELADQALKRAKVVYEE 443
++ + L ++A KRA + +E
Sbjct: 366 TLEENQVKKYHRLKEEASKRAATLAQE 392
>BC080185-1|AAH80185.1| 417|Homo sapiens SMC1A protein protein.
Length = 417
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAM---EYXXXXXXXXXXKARNRSDQFGKQSVDM 182
N+ +EK K + ED ++ +KE+ M + + + Q+ K +
Sbjct: 246 NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENT 305
Query: 183 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNEL 362
S K+ + L+N ++ + + K + + E Q +L
Sbjct: 306 SHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 363 NAASGKLSSINELADQALKRAKVVYEE 443
++ + L ++A KRA + +E
Sbjct: 366 TLEENQVKKYHRLKEEASKRAATLAQE 392
>BC064368-1|AAH64368.1| 847|Homo sapiens SMC1A protein protein.
Length = 847
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAM---EYXXXXXXXXXXKARNRSDQFGKQSVDM 182
N+ +EK K + ED ++ +KE+ M + + + Q+ K +
Sbjct: 246 NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENT 305
Query: 183 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNEL 362
S K+ + L+N ++ + + K + + E Q +L
Sbjct: 306 SHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 363 NAASGKLSSINELADQALKRAKVVYEE 443
++ + L ++A KRA + +E
Sbjct: 366 TLEENQVKKYHRLKEEASKRAATLAQE 392
>AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 29.5 bits (63), Expect = 6.6
Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAM---EYXXXXXXXXXXKARNRSDQFGKQSVDM 182
N+ +EK K + ED ++ +KE+ M + + + Q+ K +
Sbjct: 246 NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENT 305
Query: 183 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNEL 362
S K+ + L+N ++ + + K + + E Q +L
Sbjct: 306 SHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 363 NAASGKLSSINELADQALKRAKVVYEE 443
++ + L ++A KRA + +E
Sbjct: 366 TLEENQVKKYHRLKEEASKRAATLAQE 392
>AL031717-1|CAM26394.1| 1336|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 3 protein.
Length = 1336
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 54 EDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
ED +E +KE+ +E+ KA+N +DQ + S + KE L ++
Sbjct: 112 EDALEQEKKELQIQVEHYEFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQR 167
>AL031710-1|CAM26364.1| 1336|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 3 protein.
Length = 1336
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 54 EDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
ED +E +KE+ +E+ KA+N +DQ + S + KE L ++
Sbjct: 112 EDALEQEKKELQIQVEHYEFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQR 167
>AK024437-1|BAB15727.1| 260|Homo sapiens FLJ00027 protein protein.
Length = 260
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 54 EDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
ED +E +KE+ +E+ KA+N +DQ + S + KE L ++
Sbjct: 122 EDALEQEKKELQIQVEHYEFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQR 177
>AE006639-4|AAK61290.1| 1342|Homo sapiens similar to sperm specifc
protein protein.
Length = 1342
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 54 EDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
ED +E +KE+ +E+ KA+N +DQ + S + KE L ++
Sbjct: 112 EDALEQEKKELQIQVEHYEFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQR 167
>AB028989-1|BAA83018.2| 1346|Homo sapiens KIAA1066 protein protein.
Length = 1346
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 54 EDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
ED +E +KE+ +E+ KA+N +DQ + S + KE L ++
Sbjct: 122 EDALEQEKKELQIQVEHYEFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQR 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,967,801
Number of Sequences: 237096
Number of extensions: 872532
Number of successful extensions: 2102
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2102
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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