Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B08
(491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 60 1e-09
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 34 0.049
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 34 0.049
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 34 0.049
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 31 0.45
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 0.45
M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein. 31 0.45
AF067936-8|AAC19209.1| 213|Caenorhabditis elegans Synapsis in m... 29 1.4
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 29 1.8
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 29 1.8
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 29 1.8
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 29 1.8
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 29 1.8
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 29 1.8
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 29 1.8
U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid... 28 4.2
U42832-1|AAV28357.1| 442|Caenorhabditis elegans Hypothetical pr... 28 4.2
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 27 5.6
AF040651-1|AAB95013.4| 691|Caenorhabditis elegans Nhl (ring fin... 27 7.4
Z46242-14|CAA86324.2| 442|Caenorhabditis elegans Hypothetical p... 27 9.8
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 9.8
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 9.8
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 9.8
U39650-5|AAK39185.2| 632|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 59.7 bits (138), Expect = 1e-09
Identities = 41/156 (26%), Positives = 70/156 (44%)
Frame = +3
Query: 24 EKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKES 203
+ ++ ++ E IE A++EI + + Y A N S ++G+QS MS LA +
Sbjct: 1128 DAAENDMKRWEIIIENARREIENVLHYLETEGEERAQIAYNASQKYGEQSKRMSELASGT 1187
Query: 204 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 383
R AEK +A I ++++A + ANK A D I IS ++ L + N + +
Sbjct: 1188 REEAEKHLKQASEIEQLSEQAIANATQANKEASDAIYGGEQISKQIAELKEKQNQLNESI 1247
Query: 384 SSINELADQALKRAKVVYEEALGLYAEVNNTLLPDI 491
+LA++ K A A V +P +
Sbjct: 1248 HRTLDLAEEQKKSADEANNLAAVSLTNVEAVKIPSV 1283
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 34.3 bits (75), Expect = 0.049
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +3
Query: 204 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 383
R+ A + I K+ NT L+ N A + ++ + NEVQI NEL+ +L
Sbjct: 1698 RIEASDKHKKQLEIEQAELKSSNTELIGNNAALSAMKRK--VENEVQIARNELDEYLNEL 1755
Query: 384 SSINELADQALKRAKVVYEE 443
+ E A +A A + EE
Sbjct: 1756 KASEERARKAAADADRLAEE 1775
Score = 29.1 bits (62), Expect = 1.8
Identities = 30/153 (19%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALA 194
E K V + ++ + AAQ ++ S +E AR+ D + +++L
Sbjct: 1395 ELKRKQMNRVMDLQEALSAAQNKVIS-LEKAKGKLLAETEDARSDVD---RHLTVIASLE 1450
Query: 195 KESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA---NISNEVQILTNELN 365
K+ R + +++ R + DI + T+ + + + ++ N+S +++ L E
Sbjct: 1451 KKQRAFDKIVDDWKRKVDDIQKEIDATTRDSRNTSTEVFKLRSSMDNLSEQIETLRRENK 1510
Query: 366 AASGKLSSINELADQALKRAKVVYEEALGLYAE 464
S ++ INE Q + + V++ L E
Sbjct: 1511 IFSQEIRDINEQITQGGRTYQEVHKSVRRLEQE 1543
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 34.3 bits (75), Expect = 0.049
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +3
Query: 204 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 383
R+ A + I K+ NT L+ N A + ++ + NEVQI NEL+ +L
Sbjct: 1698 RIEASDKHKKQLEIEQAELKSSNTELIGNNAALSAMKRK--VENEVQIARNELDEYLNEL 1755
Query: 384 SSINELADQALKRAKVVYEE 443
+ E A +A A + EE
Sbjct: 1756 KASEERARKAAADADRLAEE 1775
Score = 29.1 bits (62), Expect = 1.8
Identities = 30/153 (19%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALA 194
E K V + ++ + AAQ ++ S +E AR+ D + +++L
Sbjct: 1395 ELKRKQMNRVMDLQEALSAAQNKVIS-LEKAKGKLLAETEDARSDVD---RHLTVIASLE 1450
Query: 195 KESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA---NISNEVQILTNELN 365
K+ R + +++ R + DI + T+ + + + ++ N+S +++ L E
Sbjct: 1451 KKQRAFDKIVDDWKRKVDDIQKEIDATTRDSRNTSTEVFKLRSSMDNLSEQIETLRRENK 1510
Query: 366 AASGKLSSINELADQALKRAKVVYEEALGLYAE 464
S ++ INE Q + + V++ L E
Sbjct: 1511 IFSQEIRDINEQITQGGRTYQEVHKSVRRLEQE 1543
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 34.3 bits (75), Expect = 0.049
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +3
Query: 204 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 383
R+ A + I K+ NT L+ N A + ++ + NEVQI NEL+ +L
Sbjct: 1698 RIEASDKHKKQLEIEQAELKSSNTELIGNNAALSAMKRK--VENEVQIARNELDEYLNEL 1755
Query: 384 SSINELADQALKRAKVVYEE 443
+ E A +A A + EE
Sbjct: 1756 KASEERARKAAADADRLAEE 1775
Score = 29.1 bits (62), Expect = 1.8
Identities = 30/153 (19%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Frame = +3
Query: 15 EAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALA 194
E K V + ++ + AAQ ++ S +E AR+ D + +++L
Sbjct: 1395 ELKRKQMNRVMDLQEALSAAQNKVIS-LEKAKGKLLAETEDARSDVD---RHLTVIASLE 1450
Query: 195 KESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQA---NISNEVQILTNELN 365
K+ R + +++ R + DI + T+ + + + ++ N+S +++ L E
Sbjct: 1451 KKQRAFDKIVDDWKRKVDDIQKEIDATTRDSRNTSTEVFKLRSSMDNLSEQIETLRRENK 1510
Query: 366 AASGKLSSINELADQALKRAKVVYEEALGLYAE 464
S ++ INE Q + + V++ L E
Sbjct: 1511 IFSQEIRDINEQITQGGRTYQEVHKSVRRLEQE 1543
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 31.1 bits (67), Expect = 0.45
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLEN--EARNIRDIADKAFNTSLVANKIAKDGITKQAN 326
D+ + D+++L +E L AEK+ + EA ++ KA N + + I KDG +++
Sbjct: 53 DEINRLKSDVNSLKRE--LEAEKIASNAEAARLKSELQKAKNE--IQDSI-KDGDSEKDA 107
Query: 327 ISNEVQILTNELNAASGKLSSINELADQALKRAKVVYE-EALGLYAE 464
+ E++ L +LN + L S+ + K K+ E E L L E
Sbjct: 108 MEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETLKLKVE 154
Score = 30.7 bits (66), Expect = 0.60
Identities = 24/100 (24%), Positives = 45/100 (45%)
Frame = +3
Query: 150 SDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANI 329
+D+FG +++L +E+R E+ + NIR + D+ + +D IT+ N
Sbjct: 460 ADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQ--------HQDAITEWKNR 511
Query: 330 SNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 449
+ + + + N SS ++ L+ K EEAL
Sbjct: 512 AEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEAL 551
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 31.1 bits (67), Expect = 0.45
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +3
Query: 153 DQFGKQSVDMSALAKESRLLAEKLEN--EARNIRDIADKAFNTSLVANKIAKDGITKQAN 326
D+ + D+++L +E L AEK+ + EA ++ KA N + + I KDG +++
Sbjct: 53 DEINRLKSDVNSLKRE--LEAEKIASNAEAARLKSELQKAKNE--IQDSI-KDGDSEKDA 107
Query: 327 ISNEVQILTNELNAASGKLSSINELADQALKRAKVVYE-EALGLYAE 464
+ E++ L +LN + L S+ + K K+ E E L L E
Sbjct: 108 MEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETLKLKVE 154
Score = 30.7 bits (66), Expect = 0.60
Identities = 24/100 (24%), Positives = 45/100 (45%)
Frame = +3
Query: 150 SDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANI 329
+D+FG +++L +E+R E+ + NIR + D+ + +D IT+ N
Sbjct: 460 ADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQ--------HQDAITEWKNR 511
Query: 330 SNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL 449
+ + + + N SS ++ L+ K EEAL
Sbjct: 512 AEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEAL 551
>M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein.
Length = 272
Score = 31.1 bits (67), Expect = 0.45
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +3
Query: 204 RLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKL 383
R+ A + I K+ NT L+ N A + ++ + NEVQI NEL+ +L
Sbjct: 207 RIEASDKHKKQLEIEQAELKSSNTELIGNNAALSAMKRK--VENEVQIARNELDEYLNEL 264
Query: 384 SSINELA 404
+ E A
Sbjct: 265 KASEERA 271
>AF067936-8|AAC19209.1| 213|Caenorhabditis elegans Synapsis in
meiosis abnormal protein2 protein.
Length = 213
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 150 SDQFGKQSVDMSALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKI-AKDGITKQAN 326
SDQ KQS + +L +++ L EK N ++ + + D + S N + A I A
Sbjct: 123 SDQMEKQSKKLISLEGKTKELVEKANNWSKTLENRVDARSHHSTCLNDVQAAIKIINNAK 182
Query: 327 ISNE 338
I+N+
Sbjct: 183 INND 186
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 29.1 bits (62), Expect = 1.8
Identities = 32/136 (23%), Positives = 63/136 (46%)
Frame = +3
Query: 42 VSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
+ AE+ ++ A +++ A + NRS Q +++ + A KE++LLAE+
Sbjct: 99 LERAEERLKIATEKLEEAT-HNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEE 157
Query: 222 LENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINEL 401
+ R ++A K ++V + + +A N++ L EL L S+
Sbjct: 158 AD---RKYDEVARK---LAMVEADLERAEERAEAG-ENKIVELEEELRVVGNNLKSLEVS 210
Query: 402 ADQALKRAKVVYEEAL 449
++AL+R + YEE +
Sbjct: 211 EEKALQR-EDSYEEQI 225
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 171 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKD---GITKQANISNE 338
++D + A+E R + EKLE +RD K T +K +D +K
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKT 77
Query: 339 VQILTNELNAASGKLSSINELADQALKRAKVVYEE 443
VQ E+ + + +++ + E ++A +R K+ E+
Sbjct: 78 VQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 112
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 29.1 bits (62), Expect = 1.8
Identities = 32/136 (23%), Positives = 63/136 (46%)
Frame = +3
Query: 42 VSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
+ AE+ ++ A +++ A + NRS Q +++ + A KE++LLAE+
Sbjct: 99 LERAEERLKIATEKLEEAT-HNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEE 157
Query: 222 LENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINEL 401
+ R ++A K ++V + + +A N++ L EL L S+
Sbjct: 158 AD---RKYDEVARK---LAMVEADLERAEERAEAG-ENKIVELEEELRVVGNNLKSLEVS 210
Query: 402 ADQALKRAKVVYEEAL 449
++AL+R + YEE +
Sbjct: 211 EEKALQR-EDSYEEQI 225
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 171 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKD---GITKQANISNE 338
++D + A+E R + EKLE +RD K T +K +D +K
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKT 77
Query: 339 VQILTNELNAASGKLSSINELADQALKRAKVVYEE 443
VQ E+ + + +++ + E ++A +R K+ E+
Sbjct: 78 VQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 112
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 29.1 bits (62), Expect = 1.8
Identities = 32/136 (23%), Positives = 63/136 (46%)
Frame = +3
Query: 42 VSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
+ AE+ ++ A +++ A + NRS Q +++ + A KE++LLAE+
Sbjct: 99 LERAEERLKIATEKLEEAT-HNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEE 157
Query: 222 LENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINEL 401
+ R ++A K ++V + + +A N++ L EL L S+
Sbjct: 158 AD---RKYDEVARK---LAMVEADLERAEERAEAG-ENKIVELEEELRVVGNNLKSLEVS 210
Query: 402 ADQALKRAKVVYEEAL 449
++AL+R + YEE +
Sbjct: 211 EEKALQR-EDSYEEQI 225
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 171 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKD---GITKQANISNE 338
++D + A+E R + EKLE +RD K T +K +D +K
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKT 77
Query: 339 VQILTNELNAASGKLSSINELADQALKRAKVVYEE 443
VQ E+ + + +++ + E ++A +R K+ E+
Sbjct: 78 VQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 112
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 29.1 bits (62), Expect = 1.8
Identities = 32/136 (23%), Positives = 63/136 (46%)
Frame = +3
Query: 42 VSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
+ AE+ ++ A +++ A + NRS Q +++ + A KE++LLAE+
Sbjct: 99 LERAEERLKIATEKLEEAT-HNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEE 157
Query: 222 LENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINEL 401
+ R ++A K ++V + + +A N++ L EL L S+
Sbjct: 158 AD---RKYDEVARK---LAMVEADLERAEERAEAG-ENKIVELEEELRVVGNNLKSLEVS 210
Query: 402 ADQALKRAKVVYEEAL 449
++AL+R + YEE +
Sbjct: 211 EEKALQR-EDSYEEQI 225
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 171 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKD---GITKQANISNE 338
++D + A+E R + EKLE +RD K T +K +D +K
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKT 77
Query: 339 VQILTNELNAASGKLSSINELADQALKRAKVVYEE 443
VQ E+ + + +++ + E ++A +R K+ E+
Sbjct: 78 VQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 112
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 29.1 bits (62), Expect = 1.8
Identities = 32/136 (23%), Positives = 63/136 (46%)
Frame = +3
Query: 42 VSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
+ AE+ ++ A +++ A + NRS Q +++ + A KE++LLAE+
Sbjct: 99 LERAEERLKIATEKLEEAT-HNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEE 157
Query: 222 LENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINEL 401
+ R ++A K ++V + + +A N++ L EL L S+
Sbjct: 158 AD---RKYDEVARK---LAMVEADLERAEERAEAG-ENKIVELEEELRVVGNNLKSLEVS 210
Query: 402 ADQALKRAKVVYEEAL 449
++AL+R + YEE +
Sbjct: 211 EEKALQR-EDSYEEQI 225
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 171 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKD---GITKQANISNE 338
++D + A+E R + EKLE +RD K T +K +D +K
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKT 77
Query: 339 VQILTNELNAASGKLSSINELADQALKRAKVVYEE 443
VQ E+ + + +++ + E ++A +R K+ E+
Sbjct: 78 VQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 112
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 29.1 bits (62), Expect = 1.8
Identities = 32/136 (23%), Positives = 63/136 (46%)
Frame = +3
Query: 42 VSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
+ AE+ ++ A +++ A + NRS Q +++ + A KE++LLAE+
Sbjct: 8 LERAEERLKIATEKLEEAT-HNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEE 66
Query: 222 LENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINEL 401
+ R ++A K ++V + + +A N++ L EL L S+
Sbjct: 67 AD---RKYDEVARK---LAMVEADLERAEERAEAG-ENKIVELEEELRVVGNNLKSLEVS 119
Query: 402 ADQALKRAKVVYEEAL 449
++AL+R + YEE +
Sbjct: 120 EEKALQR-EDSYEEQI 134
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 29.1 bits (62), Expect = 1.8
Identities = 32/136 (23%), Positives = 63/136 (46%)
Frame = +3
Query: 42 VSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSALAKESRLLAEK 221
+ AE+ ++ A +++ A + NRS Q +++ + A KE++LLAE+
Sbjct: 99 LERAEERLKIATEKLEEAT-HNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEE 157
Query: 222 LENEARNIRDIADKAFNTSLVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINEL 401
+ R ++A K ++V + + +A N++ L EL L S+
Sbjct: 158 AD---RKYDEVARK---LAMVEADLERAEERAEAG-ENKIVELEEELRVVGNNLKSLEVS 210
Query: 402 ADQALKRAKVVYEEAL 449
++AL+R + YEE +
Sbjct: 211 EEKALQR-EDSYEEQI 225
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 171 SVDMSALAKES-RLLAEKLENEARNIRDIADKAFNTSLVANKIAKD---GITKQANISNE 338
++D + A+E R + EKLE +RD K T +K +D +K
Sbjct: 18 ALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKT 77
Query: 339 VQILTNELNAASGKLSSINELADQALKRAKVVYEE 443
VQ E+ + + +++ + E ++A +R K+ E+
Sbjct: 78 VQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 112
>U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid
phosphatase protein1 protein.
Length = 449
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 414 KPDQPARLYCLTYLKLRSAHSLISVL 337
KPDQP +CLT L S+ + +S+L
Sbjct: 408 KPDQPIDQWCLTDLNKSSSFATVSML 433
>U42832-1|AAV28357.1| 442|Caenorhabditis elegans Hypothetical
protein F01E11.3 protein.
Length = 442
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 210 LAEKLENEARNIRDIADKAFNTSLVANKIA 299
L +++NE NIR +AFN ++ NK A
Sbjct: 201 LERRIKNERENIRKAIQEAFNKAVEENKTA 230
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 183 SALAKESRLLAEKLENEARNIRDIADKAFNTSLVANKIAKDGIT-KQANISNEVQILTNE 359
S L+K ++ L+ + + I +I++K + +L ++ A + K+ +V +T E
Sbjct: 107 SNLSKFNKALSMSTSHLTQEIEEISNKRLSMALPSSSAAPFITSLKRRETFTKVDEITKE 166
Query: 360 LNAASGKLSSINELA 404
LNA GK+ L+
Sbjct: 167 LNARIGKVKRTESLS 181
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 52 ALDTLPLLFSTASLPS 5
+LDT PLL TASLPS
Sbjct: 39 SLDTCPLLLQTASLPS 54
>AF040651-1|AAB95013.4| 691|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 3 protein.
Length = 691
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = +3
Query: 12 NEAVEKSKGNVSNAEDTIEAAQKEISSAMEYXXXXXXXXXXKARNRSDQFGKQSVDMSAL 191
N + + GNV + I AA +E+S+ +E R+ + K +++ +
Sbjct: 180 NREIVQLDGNVDKIVEQINAAIQEVSNLVENRRRVLIETVRVRRDEKRKVLKDQLEV--I 237
Query: 192 AKESRLLAEKLENEARNIRDIA 257
E + L ++LE+ +IR +A
Sbjct: 238 QDEKKKLQKELESCKMDIRSMA 259
>Z46242-14|CAA86324.2| 442|Caenorhabditis elegans Hypothetical
protein F35G12.1a protein.
Length = 442
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 297 LSCLLPKKY*TLYQRYL*CFSPHSLISPRGVWTPWLVR 184
L +L KK T Q+ + + HS +SP + PWL+R
Sbjct: 261 LGNMLIKKVATKLQKDVPSVTTHSTLSPIPGFRPWLIR 298
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 348 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEV 467
L NEL++ SG++ +N+L + K + + + L L +V
Sbjct: 849 LENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDV 888
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 348 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEV 467
L NEL++ SG++ +N+L + K + + + L L +V
Sbjct: 922 LENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDV 961
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 348 LTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEV 467
L NEL++ SG++ +N+L + K + + + L L +V
Sbjct: 922 LENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDV 961
>U39650-5|AAK39185.2| 632|Caenorhabditis elegans Hypothetical
protein C25A11.2 protein.
Length = 632
Score = 26.6 bits (56), Expect = 9.8
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 210 LAEKLENEARNIRDIADKAFNTSLVANKIAKD-GITKQ--ANISNEVQILT-NELNAASG 377
+ E++ + I D A T + + K G+ K+ AN S + +L N + G
Sbjct: 440 VVRNFEDQTKRIGDFAMPGLVTGYINCRDKKRIGVCKEHLANNSEHLNMLFFNTVFEDCG 499
Query: 378 KLS-SINELADQALKRAKVVYEEALGLY-AEVNNTL 479
K ++NE +D L ++Y +L ++ A++N L
Sbjct: 500 KNEITVNEDSDIVLDALDIIYHRSLAIFPAQINRVL 535
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,813,354
Number of Sequences: 27780
Number of extensions: 140398
Number of successful extensions: 500
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -