Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B08
         (491 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          25   0.44 
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          25   0.44 
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          25   0.44 
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          25   0.44 
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          25   0.44 
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          25   0.44 
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          25   0.44 
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    25   0.44 
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    25   0.58 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.3  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   9.4  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   9.4  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   9.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.4  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  LRIRLKRPRKRSVVQWNIWKERELQH*QRLATDLI 156
           LR R +  R R   +W I +ERE +H +RL   +I
Sbjct: 27  LRSRTQEERLRRRREWMIQQEREREH-ERLKKKMI 60


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  LRIRLKRPRKRSVVQWNIWKERELQH*QRLATDLI 156
           LR R +  R R   +W I +ERE +H +RL   +I
Sbjct: 27  LRSRTQEERLRRRREWMIQQEREREH-ERLKKKMI 60


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  LRIRLKRPRKRSVVQWNIWKERELQH*QRLATDLI 156
           LR R +  R R   +W I +ERE +H +RL   +I
Sbjct: 27  LRSRTQEERLRRRREWMIQQEREREH-ERLKKKMI 60


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  LRIRLKRPRKRSVVQWNIWKERELQH*QRLATDLI 156
           LR R +  R R   +W I +ERE +H +RL   +I
Sbjct: 27  LRSRTQEERLRRRREWMIQQEREREH-ERLKKKMI 60


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  LRIRLKRPRKRSVVQWNIWKERELQH*QRLATDLI 156
           LR R +  R R   +W I +ERE +H +RL   +I
Sbjct: 27  LRSRTQEERLRRRREWMIQQEREREH-ERLKKKMI 60


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  LRIRLKRPRKRSVVQWNIWKERELQH*QRLATDLI 156
           LR R +  R R   +W I +ERE +H +RL   +I
Sbjct: 27  LRSRTQEERLRRRREWMIQQEREREH-ERLKKKMI 60


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  LRIRLKRPRKRSVVQWNIWKERELQH*QRLATDLI 156
           LR R +  R R   +W I +ERE +H +RL   +I
Sbjct: 27  LRSRTQEERLRRRREWMIQQEREREH-ERLKKKMI 60


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  LRIRLKRPRKRSVVQWNIWKERELQH*QRLATDLI 156
           LR R +  R R   +W I +ERE +H +RL   +I
Sbjct: 27  LRSRTQEERLRRRREWMIQQEREREH-ERLKKKMI 60


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 94  ALLISFWAASIVSSALDTLPLLFSTASLPS 5
           A L S  AASI S+AL T+ ++ +   LP+
Sbjct: 431 ATLASIGAASIPSAALITMLIVLTALGLPT 460


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 319 CFVIPSLAILFATKEVLNALSAISL 245
           C V  SL +LF+T  +LN L  ISL
Sbjct: 119 CDVWRSLDVLFSTASILN-LCVISL 142


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 51  HWIHYPCS 28
           HW+ +PCS
Sbjct: 78  HWVIHPCS 85


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 51  HWIHYPCS 28
           HW+ +PCS
Sbjct: 78  HWVIHPCS 85


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 51  HWIHYPCS 28
           HW+ +PCS
Sbjct: 78  HWVIHPCS 85


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 40   MYPMLRIRLKRPRKRSVVQWNIW 108
            +Y  L+I L     +  +QW IW
Sbjct: 1001 VYAPLKISLDVNTPKGNMQWKIW 1023


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 165 KQSVDMSALAKESRLLAEKLENEARNI 245
           +QSV++     + +L ++KLE   R +
Sbjct: 358 QQSVELKLALDQEQLKSKKLEESMRKL 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,758
Number of Sequences: 438
Number of extensions: 1820
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)