Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B07
(405 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P51123 Cluster: Transcription initiation factor TFIID s... 98 7e-20
UniRef50_Q177P0 Cluster: Transcription initiation factor TFIID s... 93 2e-18
UniRef50_P21675 Cluster: Transcription initiation factor TFIID s... 70 2e-11
UniRef50_UPI0000E46F90 Cluster: PREDICTED: similar to TAF1 RNA p... 58 4e-10
UniRef50_Q8LRK9 Cluster: Transcription initiation factor TFIID s... 50 2e-05
UniRef50_Q6FTR1 Cluster: Similar to sp|P46677 Saccharomyces cere... 49 3e-05
UniRef50_P46677 Cluster: Transcription initiation factor TFIID s... 47 1e-04
UniRef50_Q09813 Cluster: Putative transcription initiation facto... 47 2e-04
UniRef50_Q8SR44 Cluster: TRANSCRIPTION INITIATION FACTOR TFIID 1... 46 4e-04
UniRef50_Q751M7 Cluster: AGL330Wp; n=2; Saccharomycetaceae|Rep: ... 45 5e-04
UniRef50_Q67W65 Cluster: Transcription initiation factor TFIID s... 45 5e-04
UniRef50_A3LWY0 Cluster: Predicted protein; n=1; Pichia stipitis... 44 9e-04
UniRef50_Q4PGM2 Cluster: Putative uncharacterized protein; n=2; ... 44 0.001
UniRef50_Q61AU4 Cluster: Putative uncharacterized protein CBG136... 43 0.003
UniRef50_A5DU38 Cluster: Putative uncharacterized protein; n=1; ... 42 0.004
UniRef50_A5DIK9 Cluster: Putative uncharacterized protein; n=1; ... 42 0.005
UniRef50_Q4UGR2 Cluster: Bromodomain protein, putative; n=1; The... 41 0.008
UniRef50_Q4N8Y7 Cluster: Putative uncharacterized protein; n=1; ... 41 0.008
UniRef50_Q9XUL9 Cluster: Putative uncharacterized protein taf-1;... 41 0.011
UniRef50_Q5KJU1 Cluster: Transcription initiation factor tfiid 1... 40 0.025
UniRef50_Q2UN35 Cluster: Transcription initiation factor TFIID; ... 40 0.025
UniRef50_A1CTP9 Cluster: Transcription factor TFIID complex 145 ... 40 0.025
UniRef50_Q870E2 Cluster: Transposase; n=1; Fusarium oxysporum f.... 39 0.033
UniRef50_Q6BJW9 Cluster: Similar to sp|P46677 Saccharomyces cere... 39 0.033
UniRef50_A6RLR1 Cluster: Putative uncharacterized protein; n=2; ... 39 0.043
UniRef50_Q0U7N4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.10
UniRef50_Q6BZP0 Cluster: Similar to sp|P46677 Saccharomyces cere... 37 0.18
UniRef50_Q5CKI5 Cluster: Bromodomain; n=2; Cryptosporidium|Rep: ... 36 0.23
UniRef50_A7AQG8 Cluster: Bromodomain containing protein; n=1; Ba... 36 0.31
UniRef50_Q59K14 Cluster: Putative uncharacterized protein TAF1; ... 36 0.41
UniRef50_Q2FM98 Cluster: Putative uncharacterized protein; n=1; ... 36 0.41
UniRef50_UPI0000586BEA Cluster: PREDICTED: similar to transposas... 34 1.2
UniRef50_Q9C6V0 Cluster: En/Spm-like transposon protein, putativ... 34 1.2
UniRef50_A7PFD1 Cluster: Chromosome chr11 scaffold_14, whole gen... 34 1.2
UniRef50_Q2HEH9 Cluster: Putative uncharacterized protein; n=2; ... 34 1.2
UniRef50_UPI000023EB28 Cluster: hypothetical protein FG09338.1; ... 33 1.6
UniRef50_Q4WBK7 Cluster: C6 transcription factor, putative; n=1;... 33 1.6
UniRef50_Q86X95 Cluster: CBF1-interacting corepressor; n=40; Euk... 33 1.6
UniRef50_A7GLN9 Cluster: Putative uncharacterized protein precur... 33 2.2
UniRef50_Q29II5 Cluster: GA17013-PA; n=2; pseudoobscura subgroup... 33 2.9
UniRef50_A4RLF2 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_UPI0000F2CE81 Cluster: PREDICTED: hypothetical protein;... 32 3.8
UniRef50_Q94901 Cluster: RNA-binding protein lark; n=8; Endopter... 32 3.8
UniRef50_Q6JAE0 Cluster: Putative tubulin gamma-2 chain; n=1; Ze... 32 5.0
UniRef50_Q5DEN5 Cluster: SJCHGC02913 protein; n=1; Schistosoma j... 32 5.0
UniRef50_Q7UIF4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_Q6IQ97 Cluster: RNA-binding protein 4; n=5; Clupeocepha... 31 6.6
UniRef50_P54734 Cluster: Serine/threonine-protein kinase pknA; n... 31 6.6
UniRef50_UPI0000660DCD Cluster: Homolog of Danio rerio "Acetylch... 31 8.7
UniRef50_Q1RLL7 Cluster: 4932442L08Rik protein; n=3; Mus musculu... 31 8.7
UniRef50_A6NNH2 Cluster: Putative protein FAM90A2?; n=4; Catarrh... 31 8.7
>UniRef50_P51123 Cluster: Transcription initiation factor TFIID
subunit 1; n=7; Eumetazoa|Rep: Transcription initiation
factor TFIID subunit 1 - Drosophila melanogaster (Fruit
fly)
Length = 2129
Score = 97.9 bits (233), Expect = 7e-20
Identities = 63/138 (45%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Frame = +2
Query: 5 REQLRRIKRNQERERLAGNVTVPGXXXXXXXXXXXXXXXXXXXXQGLIPLGQIKQEPDLL 184
+EQLRRIKRNQERERLA G + P
Sbjct: 1277 QEQLRRIKRNQERERLAQLAQNQKLQPGGMPTSLGDPKSSGGHSHKERDSGYKEVSP--- 1333
Query: 185 HTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMA----GGPSSPLDTDAE-PT 349
SR++ KLKPDLKLKCGACGQVGHMRTNKACPLY+G + PS D D +
Sbjct: 1334 ---SRKKFKLKPDLKLKCGACGQVGHMRTNKACPLYSGMQSSLSQSNPSLADDFDEQSEK 1390
Query: 350 SIEPEDDDLGYVDGTKLT 403
+ +DDDL VDGTK+T
Sbjct: 1391 EMTMDDDDLVNVDGTKVT 1408
>UniRef50_Q177P0 Cluster: Transcription initiation factor TFIID
subunit 1; n=3; Endopterygota|Rep: Transcription
initiation factor TFIID subunit 1 - Aedes aegypti
(Yellowfever mosquito)
Length = 1962
Score = 93.1 bits (221), Expect = 2e-18
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Frame = +2
Query: 5 REQLRRIKRNQERERLAGNVTVPGXXXXXXXXXXXXXXXXXXXXQGLIPLGQIKQEPDLL 184
+EQLRRIKRNQ++ G + + + K+
Sbjct: 1256 QEQLRRIKRNQQK---IGMMQQQHQQHSVGTPISLGDRETPGSSKSSVNPSTPKESHAKE 1312
Query: 185 HT-TSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSIEP 361
H+ +SR++ KLKPDLKLKCGACGQVGHMRTNKACPLYTG++ + T+ + IE
Sbjct: 1313 HSPSSRKKVKLKPDLKLKCGACGQVGHMRTNKACPLYTGTVPTPSLNVAMTEEQEEEIEK 1372
Query: 362 E----DDDLGYVDGTKL 400
E D+DL VDGTK+
Sbjct: 1373 ELNADDEDLVNVDGTKV 1389
>UniRef50_P21675 Cluster: Transcription initiation factor TFIID
subunit 1 (EC 2.7.11.1) (Transcription initiation factor
TFIID 250 kDa subunit) (TAF(II)250); n=58; Bilateria|Rep:
Transcription initiation factor TFIID subunit 1 (EC
2.7.11.1) (Transcription initiation factor TFIID 250 kDa
subunit) (TAF(II)250) - Homo sapiens (Human)
Length = 1872
Score = 70.1 bits (164), Expect = 2e-11
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Frame = +2
Query: 200 RRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPL------DTDAEPTSIEP 361
++ K +PDLKLKCGACG +GHMRTNK CPLY + A PS+P+ + + E T I
Sbjct: 1252 KKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNA-PPSNPVAMTEEQEEELEKTVIHN 1310
Query: 362 EDDDLGYVDGTKL 400
++++L V+GTK+
Sbjct: 1311 DNEELIKVEGTKI 1323
Score = 32.7 bits (71), Expect = 2.9
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 5 REQLRRIKRNQERERLAG 58
+EQLRR+KRNQE+E+L G
Sbjct: 1228 QEQLRRLKRNQEKEKLKG 1245
>UniRef50_UPI0000E46F90 Cluster: PREDICTED: similar to TAF1 RNA
polymerase II, TATA box binding protein (TBP)-associated;
n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to TAF1 RNA polymerase II, TATA box binding
protein (TBP)-associated - Strongylocentrotus purpuratus
Length = 1927
Score = 58.4 bits (135), Expect(2) = 4e-10
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +2
Query: 158 QIKQEPDLLHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTD 337
++ +P ++ +++ KL +LK+KCGACG +GHMRTNK CP Y + P +P++
Sbjct: 1319 KVNPKPKIIKKIKKKKEKL--NLKMKCGACGLIGHMRTNKDCPSYKKEDSEKP-APINVA 1375
Query: 338 AEPTSIEPE-----DDDLGYVDGTKL 400
E E DD+L +GTK+
Sbjct: 1376 MTQEQEEEEEKQLGDDELVKTEGTKI 1401
Score = 27.1 bits (57), Expect(2) = 4e-10
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 5 REQLRRIKRNQER 43
+EQLRRIKRNQE+
Sbjct: 1302 QEQLRRIKRNQEK 1314
>UniRef50_Q8LRK9 Cluster: Transcription initiation factor TFIID
subunit 1-A; n=4; core eudicotyledons|Rep: Transcription
initiation factor TFIID subunit 1-A - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1919
Score = 50.0 bits (114), Expect = 2e-05
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 152 LGQIKQEPDLLHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSS-PL 328
LGQ+K+ L + K CGACGQ GHMRTNK CP Y + P +
Sbjct: 1371 LGQLKKVKILNENLKVFKEKKSARENFVCGACGQHGHMRTNKHCPRYRENTESQPEGIDM 1430
Query: 329 DTDA-EPTSIEP 361
D A +P+S EP
Sbjct: 1431 DKSAGKPSSSEP 1442
>UniRef50_Q6FTR1 Cluster: Similar to sp|P46677 Saccharomyces
cerevisiae YGR274c TAF145 TFIID subunit; n=2;
Saccharomycetales|Rep: Similar to sp|P46677 Saccharomyces
cerevisiae YGR274c TAF145 TFIID subunit - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 1039
Score = 49.2 bits (112), Expect = 3e-05
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPL-YTGSMAGGPSSPLDTDAEPT 349
+C CGQVGH+RTNK+CP+ Y+ + GG ++P DT + T
Sbjct: 989 RCATCGQVGHIRTNKSCPMYYSDNGPGGRNAPGDTPSAAT 1028
>UniRef50_P46677 Cluster: Transcription initiation factor TFIID
subunit 1; n=2; Saccharomyces cerevisiae|Rep:
Transcription initiation factor TFIID subunit 1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1066
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 176 DLLHTTSRRRAKLK-PDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSP 325
DL T + A+ K + +C CGQ+GH+RTNK+CP+Y S P+SP
Sbjct: 1017 DLAGVTDGKAARNKGKNTTRRCATCGQIGHIRTNKSCPMY--SSKDNPASP 1065
>UniRef50_Q09813 Cluster: Putative transcription initiation factor
TFIID 111 kDa subunit; n=1; Schizosaccharomyces
pombe|Rep: Putative transcription initiation factor TFIID
111 kDa subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 979
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +2
Query: 215 KPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLD 331
KP + KC CGQVGHM+TNK CPL+ G GG ++ LD
Sbjct: 941 KPTTR-KCSNCGQVGHMKTNKICPLF-GRPEGGLATMLD 977
>UniRef50_Q8SR44 Cluster: TRANSCRIPTION INITIATION FACTOR TFIID
111kDa SUBUNIT; n=1; Encephalitozoon cuniculi|Rep:
TRANSCRIPTION INITIATION FACTOR TFIID 111kDa SUBUNIT -
Encephalitozoon cuniculi
Length = 883
Score = 45.6 bits (103), Expect = 4e-04
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +2
Query: 200 RRAKLKPDLK--LKCGACGQVGHMRTNKACPLYTGS 301
R+ K+ + K L CG CGQVGHM+TNKACP + +
Sbjct: 713 RKKKISEERKGVLTCGNCGQVGHMKTNKACPKFASA 748
>UniRef50_Q751M7 Cluster: AGL330Wp; n=2; Saccharomycetaceae|Rep:
AGL330Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1011
Score = 45.2 bits (102), Expect = 5e-04
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPLYTGSMAGGPSS 322
+C CG +GH+RTNK+CP+Y G +A ++
Sbjct: 944 RCATCGAIGHIRTNKSCPMYNGGVAANANA 973
>UniRef50_Q67W65 Cluster: Transcription initiation factor TFIID
subunit 1; n=5; Oryza sativa|Rep: Transcription
initiation factor TFIID subunit 1 - Oryza sativa subsp.
japonica (Rice)
Length = 1810
Score = 45.2 bits (102), Expect = 5e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLY 292
L CGACGQ+GHMRTNK CP Y
Sbjct: 1369 LVCGACGQLGHMRTNKLCPKY 1389
>UniRef50_A3LWY0 Cluster: Predicted protein; n=1; Pichia stipitis|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 1114
Score = 44.4 bits (100), Expect = 9e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSIEP 361
+C +CG GH+RTNK CPLY ++ G + PL D + I P
Sbjct: 1026 RCASCGAFGHIRTNKTCPLY--AITRGGTVPLQKDEQGNPIIP 1066
>UniRef50_Q4PGM2 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Ustilago maydis (Smut fungus)
Length = 1214
Score = 44.0 bits (99), Expect = 0.001
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 215 KPDLKLKCGACGQVGHMRTNKACPLY 292
K D K +CG CG+VGHM TN +CP++
Sbjct: 1092 KTDTKRRCGRCGEVGHMSTNTSCPMF 1117
>UniRef50_Q61AU4 Cluster: Putative uncharacterized protein CBG13620;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13620 - Caenorhabditis
briggsae
Length = 1729
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 164 KQEPDLLHTTSRRRAKLKPDL-KLKCGACGQVGHMRTNKACPLY 292
KQ+ T R+ P+L K++C AC GHM+TN+ CPLY
Sbjct: 1192 KQQAKTPKQTVRKEKPPNPNLQKMRCSACHAYGHMKTNRNCPLY 1235
>UniRef50_A5DU38 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1279
Score = 42.3 bits (95), Expect = 0.004
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPLYTGSMAG 310
+C +CG GH+RTNKACPLY + G
Sbjct: 1194 RCKSCGSFGHIRTNKACPLYNQMITG 1219
>UniRef50_A5DIK9 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1056
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 167 QEPDLLHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGG 313
Q PD SR+ + KC CG GH+ TNK+CPLY+ G
Sbjct: 991 QPPDGSPPVSRKGIGKGKNTNRKCATCGAYGHISTNKSCPLYSQRFGKG 1039
>UniRef50_Q4UGR2 Cluster: Bromodomain protein, putative; n=1;
Theileria annulata|Rep: Bromodomain protein, putative -
Theileria annulata
Length = 1904
Score = 41.1 bits (92), Expect = 0.008
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 236 CGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSIEPEDDDL 376
C CGQ GH+ +N CPLY+G T EP ++ DDDL
Sbjct: 1555 CRNCGQSGHIASNPKCPLYSGDKLKHDPLSRQTRKEP-EVDTSDDDL 1600
>UniRef50_Q4N8Y7 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 2132
Score = 41.1 bits (92), Expect = 0.008
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 236 CGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSIEPEDDDL 376
C CGQ GH+ +N CPLY+G T EP ++ DDDL
Sbjct: 1716 CRNCGQSGHIASNPKCPLYSGDKLKHDPLSRQTRKEP-EVDTSDDDL 1761
>UniRef50_Q9XUL9 Cluster: Putative uncharacterized protein taf-1; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein taf-1 - Caenorhabditis elegans
Length = 1792
Score = 40.7 bits (91), Expect = 0.011
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 218 PDL-KLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSI 355
P+L K++C AC GHM+TN+ CPLY P +PL + E ++I
Sbjct: 1261 PNLQKMRCSACHAYGHMKTNRNCPLY----GKDPLTPLKEEDEGSTI 1303
>UniRef50_Q5KJU1 Cluster: Transcription initiation factor tfiid 111
kDa subunit, putative; n=2; Filobasidiella
neoformans|Rep: Transcription initiation factor tfiid 111
kDa subunit, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 1069
Score = 39.5 bits (88), Expect = 0.025
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +2
Query: 227 KLKCGACGQVGHMRTNKACPLY---TGSMAGGPSSPLDT 334
K KCGACG +GH + N+ CP++ TG+ + G SP +T
Sbjct: 991 KRKCGACGAIGHTKANRNCPMFGVTTGNASVG-LSPSNT 1028
>UniRef50_Q2UN35 Cluster: Transcription initiation factor TFIID; n=4;
Eurotiomycetidae|Rep: Transcription initiation factor
TFIID - Aspergillus oryzae
Length = 1082
Score = 39.5 bits (88), Expect = 0.025
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +2
Query: 233 KCGACGQVGHMRTN-KACPLYTGSM 304
KC CGQVGH++TN K CPL G+M
Sbjct: 1039 KCANCGQVGHIKTNKKLCPLLNGTM 1063
>UniRef50_A1CTP9 Cluster: Transcription factor TFIID complex 145 kDa
subunit, putative; n=5; Trichocomaceae|Rep: Transcription
factor TFIID complex 145 kDa subunit, putative -
Aspergillus clavatus
Length = 1113
Score = 39.5 bits (88), Expect = 0.025
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +2
Query: 233 KCGACGQVGHMRTN-KACPLYTGSM 304
KC CGQVGH++TN K CPL G+M
Sbjct: 1070 KCANCGQVGHIKTNKKLCPLLNGTM 1094
>UniRef50_Q870E2 Cluster: Transposase; n=1; Fusarium oxysporum f.
sp. melonis|Rep: Transposase - Fusarium oxysporum f. sp.
melonis
Length = 836
Score = 39.1 bits (87), Expect = 0.033
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 146 IPLGQIKQEPDLLHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPL 289
+P ++EP T R L+P KC C Q GHM T+KACPL
Sbjct: 571 LPPTSTQREPS---TFERIEKALQPKAPPKCSRCHQQGHMMTSKACPL 615
>UniRef50_Q6BJW9 Cluster: Similar to sp|P46677 Saccharomyces
cerevisiae YGR274c TAF145 TFIID subunit; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P46677
Saccharomyces cerevisiae YGR274c TAF145 TFIID subunit -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1138
Score = 39.1 bits (87), Expect = 0.033
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTD-AEPTSIEP 361
+C +CG GH+RTNK+CPL+ + S+ +T TS+ P
Sbjct: 1084 RCASCGAFGHIRTNKSCPLFYQNNEKEASTETNTTVGAETSVPP 1127
>UniRef50_A6RLR1 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 1151
Score = 38.7 bits (86), Expect = 0.043
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 233 KCGACGQVGHMRTN-KACPLYTGSMAGGPSSP 325
KC CGQ GH++TN K CPL G+M +P
Sbjct: 1105 KCANCGQTGHIKTNKKLCPLLNGTMKPEDGAP 1136
>UniRef50_Q0U7N4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1121
Score = 37.5 bits (83), Expect = 0.10
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 233 KCGACGQVGHMRTN-KACPLYTGS 301
KC CG+VGH++TN K CPL GS
Sbjct: 1069 KCANCGEVGHIKTNKKLCPLLNGS 1092
>UniRef50_Q6BZP0 Cluster: Similar to sp|P46677 Saccharomyces
cerevisiae YGR274c TAF145 TFIID subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P46677 Saccharomyces
cerevisiae YGR274c TAF145 TFIID subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 1080
Score = 36.7 bits (81), Expect = 0.18
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPLY 292
+C CG GH+RTNK+CP+Y
Sbjct: 1052 QCKNCGAYGHIRTNKSCPMY 1071
>UniRef50_Q5CKI5 Cluster: Bromodomain; n=2; Cryptosporidium|Rep:
Bromodomain - Cryptosporidium hominis
Length = 1966
Score = 36.3 bits (80), Expect = 0.23
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 236 CGACGQVGHMRTNKACPLYTGSMAGGPSS 322
C CGQVGH+ +N CP Y G+ + +S
Sbjct: 1614 CRRCGQVGHIASNPMCPYYEGNKSSSGTS 1642
>UniRef50_A7AQG8 Cluster: Bromodomain containing protein; n=1; Babesia
bovis|Rep: Bromodomain containing protein - Babesia bovis
Length = 1857
Score = 35.9 bits (79), Expect = 0.31
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 236 CGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEP 346
C +CGQ GH+ +N CPLY G + +T P
Sbjct: 1577 CRSCGQSGHIASNPKCPLYKGDKSRSLGDITNTSKPP 1613
>UniRef50_Q59K14 Cluster: Putative uncharacterized protein TAF1;
n=1; Candida albicans|Rep: Putative uncharacterized
protein TAF1 - Candida albicans (Yeast)
Length = 488
Score = 35.5 bits (78), Expect = 0.41
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPLYTGSMAG 310
+C CG GH+RTN CPLY + G
Sbjct: 418 RCKNCGAYGHIRTNAKCPLYKKMVLG 443
>UniRef50_Q2FM98 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 252
Score = 35.5 bits (78), Expect = 0.41
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 266 RTNKACPLYTGSMAGGPSSPLDTDAEPTSIEPEDDDLG 379
+T CP+ T M G PS PL+ D E T I D D G
Sbjct: 10 KTRYTCPITTDQMRGIPSPPLEDDFEGTVIALPDPDAG 47
>UniRef50_UPI0000586BEA Cluster: PREDICTED: similar to transposase;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to transposase - Strongylocentrotus purpuratus
Length = 1363
Score = 33.9 bits (74), Expect = 1.2
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 182 LHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDT---DAEPTS 352
L+ T R + P + +C ACG++GH + C + S D D E
Sbjct: 225 LNCTYEHRNRACPAINERCRACGEIGHFSKSPRCTEHRNQRRQQSRSRHDNRRRDVEYVD 284
Query: 353 IEPEDDDLGYVD 388
EDDD Y D
Sbjct: 285 RHCEDDDEPYRD 296
>UniRef50_Q9C6V0 Cluster: En/Spm-like transposon protein, putative;
n=6; Arabidopsis thaliana|Rep: En/Spm-like transposon
protein, putative - Arabidopsis thaliana (Mouse-ear
cress)
Length = 1431
Score = 33.9 bits (74), Expect = 1.2
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Frame = +2
Query: 185 HTTSRR-RAKLKPDLKLKCGACGQVGHM------RTNK-ACPLYTGSMAGGPSSPLDTDA 340
HTTSR+ +L D+KL+ G +V + RT K P+ T + + + +D
Sbjct: 1062 HTTSRKGMVRLAEDMKLESGDPSEVTRLKFWVKSRTKKDGTPVNTNAAEQIAAELVGSDG 1121
Query: 341 EPTSIEPEDDDLGYVDG 391
PTS PE+D L + G
Sbjct: 1122 PPTSANPEEDHLSQLLG 1138
>UniRef50_A7PFD1 Cluster: Chromosome chr11 scaffold_14, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_14, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 248
Score = 33.9 bits (74), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 266 AYDPLDRTHRTLTSNRASA*LVVATSCGGDPVPV*SDLTVSNPGMAKINPSS 111
A + LD TH +L+S A ++ ATS +P+P+ ++ P + K PSS
Sbjct: 56 ALNDLDNTHESLSSKPCKASILAATSPRSNPIPI-ANRAKHMPKVEKCRPSS 106
>UniRef50_Q2HEH9 Cluster: Putative uncharacterized protein; n=2;
Sordariales|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1126
Score = 33.9 bits (74), Expect = 1.2
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +2
Query: 233 KCGACGQVGHMRTNK--ACP 286
KC CGQVGH++TNK CP
Sbjct: 1027 KCATCGQVGHIKTNKKYVCP 1046
>UniRef50_UPI000023EB28 Cluster: hypothetical protein FG09338.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG09338.1
- Gibberella zeae PH-1
Length = 1134
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKA--CPLYTGS 301
KC CGQVGH++TNK P +T S
Sbjct: 1066 KCANCGQVGHIKTNKKYDSPFFTSS 1090
>UniRef50_Q4WBK7 Cluster: C6 transcription factor, putative; n=1;
Aspergillus fumigatus|Rep: C6 transcription factor,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 684
Score = 33.5 bits (73), Expect = 1.6
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 164 KQEPDLLHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAE 343
++ P L T RRR KLK D +L CG C + +T C +Y G AG SS ++
Sbjct: 14 RRRPPLSCTVCRRR-KLKCDRELPCGQCTK---SKTPDQC-IYVGPQAGSLSSVRRAESR 68
Query: 344 PTS 352
T+
Sbjct: 69 DTT 71
>UniRef50_Q86X95 Cluster: CBF1-interacting corepressor; n=40;
Eukaryota|Rep: CBF1-interacting corepressor - Homo
sapiens (Human)
Length = 450
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSIEPED 367
++C C + GH+ T++ CPL+ ++G +S + TD S+ P +
Sbjct: 126 VRCIKCHKWGHVNTDRECPLF--GLSGINASSVPTDGSGPSMHPSE 169
>UniRef50_A7GLN9 Cluster: Putative uncharacterized protein precursor;
n=1; Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
Putative uncharacterized protein precursor - Bacillus
cereus subsp. cytotoxis NVH 391-98
Length = 1135
Score = 33.1 bits (72), Expect = 2.2
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 31 ESREGKTGWKRHSTRT*YF**LEHDVIDDGFIFAIPGFDTVRSD 162
+ R+ K WK + + LE+DVI DGF+++ G D V SD
Sbjct: 1037 DQRQHKNEWKIYVKQVKPLTSLENDVISDGFVYSKGGQDIVLSD 1080
>UniRef50_Q29II5 Cluster: GA17013-PA; n=2; pseudoobscura subgroup|Rep:
GA17013-PA - Drosophila pseudoobscura (Fruit fly)
Length = 2857
Score = 32.7 bits (71), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 266 RTNKACPLYTGSMAGGPSSPLDTDAEPTSIEP 361
+ K C L TG+ GG ++P D D +P + P
Sbjct: 923 KEKKPCELETGAAGGGAATPTDLDKDPPRVAP 954
>UniRef50_A4RLF2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1184
Score = 32.7 bits (71), Expect = 2.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPLYTGSMAGGPSSPL-DTDAEPTSI 355
KC CGQVGH++TNK Y P+ P + D PT I
Sbjct: 1117 KCANCGQVGHIKTNKK---YRRPSHDDPAPPRHNPDTPPTFI 1155
>UniRef50_UPI0000F2CE81 Cluster: PREDICTED: hypothetical protein;
n=2; Theria|Rep: PREDICTED: hypothetical protein -
Monodelphis domestica
Length = 679
Score = 32.3 bits (70), Expect = 3.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSIEPED 367
++C C + GH+ T++ CPL+ ++G +S + +D S+ P +
Sbjct: 126 VRCIKCHKWGHVNTDRECPLF--GLSGINASSVSSDGSGPSMHPSE 169
>UniRef50_Q94901 Cluster: RNA-binding protein lark; n=8;
Endopterygota|Rep: RNA-binding protein lark - Drosophila
melanogaster (Fruit fly)
Length = 352
Score = 32.3 bits (70), Expect = 3.8
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 188 TTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGG--PSSPL 328
+TSR R K +C CG+ GH +K CP GS GG P SPL
Sbjct: 154 STSRVRPKPGMGDPEQCYRCGRSGHW--SKECPRLYGSAGGGREPPSPL 200
>UniRef50_Q6JAE0 Cluster: Putative tubulin gamma-2 chain; n=1; Zea
mays|Rep: Putative tubulin gamma-2 chain - Zea mays
(Maize)
Length = 449
Score = 31.9 bits (69), Expect = 5.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 227 KLKCGACGQVGHMRTNKACPL 289
K++C CG++GH +T+ CPL
Sbjct: 338 KVRCPNCGELGHRKTSYKCPL 358
>UniRef50_Q5DEN5 Cluster: SJCHGC02913 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02913 protein - Schistosoma
japonicum (Blood fluke)
Length = 249
Score = 31.9 bits (69), Expect = 5.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSS 322
++C C Q GH+ T++ CPL+ S P++
Sbjct: 122 VRCMRCKQWGHLNTDRVCPLFGQSFTKEPTT 152
>UniRef50_Q7UIF4 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 941
Score = 31.5 bits (68), Expect = 6.6
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 206 AKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSP---LDTDAEPTS 352
A +KP + KCGAC G +R L GS+ G SP LD D P+S
Sbjct: 77 ADIKPLFQEKCGACH--GVLRQEGGLRLDAGSLIRGDESPNGLLDFDQPPSS 126
>UniRef50_Q6IQ97 Cluster: RNA-binding protein 4; n=5;
Clupeocephala|Rep: RNA-binding protein 4 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 419
Score = 31.5 bits (68), Expect = 6.6
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 188 TTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPL-YTGSMAGGPSS 322
+TSR R + C CGQ GH +K CPL GS GPSS
Sbjct: 146 STSRLRTAPGMGERTGCYRCGQEGHW--SKECPLDQNGSYREGPSS 189
>UniRef50_P54734 Cluster: Serine/threonine-protein kinase pknA; n=4;
Nostocaceae|Rep: Serine/threonine-protein kinase pknA -
Anabaena sp. (strain PCC 7120)
Length = 564
Score = 31.5 bits (68), Expect = 6.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 356 LWKLVQHPYQVEKKVLQP*NRYTGDTPCLYAY 261
+++LVQ +Q E +L+ Y+G P LYAY
Sbjct: 51 IYQLVQERFQREAAILEDLGSYSGQIPTLYAY 82
>UniRef50_UPI0000660DCD Cluster: Homolog of Danio rerio
"Acetylcholine receptor delta subunit; n=1; Takifugu
rubripes|Rep: Homolog of Danio rerio "Acetylcholine
receptor delta subunit - Takifugu rubripes
Length = 204
Score = 31.1 bits (67), Expect = 8.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 240 VRAVKWVICVQTRRVPCIPVLWLEDLLLHL 329
V +WVI Q R C+PVL + +LLHL
Sbjct: 63 VNPPRWVIRTQQTRHLCVPVLCMATVLLHL 92
>UniRef50_Q1RLL7 Cluster: 4932442L08Rik protein; n=3; Mus
musculus|Rep: 4932442L08Rik protein - Mus musculus
(Mouse)
Length = 411
Score = 31.1 bits (67), Expect = 8.7
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 194 SRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSIEPE 364
++RR + + ++KC CG GH ++ CP+ A P PL E + +P+
Sbjct: 14 AQRRPPPEENPRVKCRDCGAFGHTVRSRKCPIKCWDGAKAP-LPLGVKKEKENRDPK 69
>UniRef50_A6NNH2 Cluster: Putative protein FAM90A2?; n=4;
Catarrhini|Rep: Putative protein FAM90A2? - Homo sapiens
(Human)
Length = 460
Score = 31.1 bits (67), Expect = 8.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 227 KLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPTSIEPEDDDLGY 382
++KC CG GH +K CP+ S A P L + E +++P L +
Sbjct: 41 RVKCKNCGAFGHSARSKTCPIKRWSGA-LPLQALGSHKEKENLKPAKAQLPF 91
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,922,703
Number of Sequences: 1657284
Number of extensions: 6845057
Number of successful extensions: 19654
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 18945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19645
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -