Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B05
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.3  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   9.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 252 CKSESPWYAPVGSIPC 205
           CK +  WY P G   C
Sbjct: 234 CKGDGKWYLPSGGCHC 249


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 482 TSSAPSV*CPLSPKLLPATG 423
           T+  P++ CPL+P   P TG
Sbjct: 211 TACPPTLACPLNPNPQPLTG 230


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 374 TKSFSAPEINFDFPETVRLP 433
           TKS  A  I    P+TVR P
Sbjct: 522 TKSMEAANIMSKLPKTVRTP 541


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 296 TYVPRAVLVDLEPGTMDSVRSRNPFG 373
           TY+P + + +  PG  D +R  + FG
Sbjct: 332 TYMPPSGIPNWVPGNHDQLRLVSRFG 357


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 296 TYVPRAVLVDLEPGTMDSVRSRNPFG 373
           TY+P + + +  PG  D +R  + FG
Sbjct: 332 TYMPPSGIPNWVPGNHDQLRLVSRFG 357


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 67  INVTREILSNNFY*LHINKDEGNRPRPGRTMRKPD 171
           ++V R    N    + ++ +E N   PGR   KP+
Sbjct: 372 VSVGRYFYPNGTEKMTLSVNESNITWPGRLQTKPE 406


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 432 GNRTVSGKSKLISGAEKDFV 373
           GN  ++ KSK    AE+D V
Sbjct: 149 GNNKITMKSKKEQNAEEDIV 168


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 248 SQSHHGMRQWDQ 213
           S  HHG + W Q
Sbjct: 402 SSHHHGSKSWTQ 413


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,192
Number of Sequences: 438
Number of extensions: 3292
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)