Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B04
(507 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 31 0.007
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 23 1.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 3.2
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 5.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 5.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 5.6
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 7.3
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 9.7
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 31.1 bits (67), Expect = 0.007
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 140 YICTICPDHVALPSFSSIYEHIESSTHIETV-CKLIRSALHPSDIDEELVVLNKISTE-- 310
Y C IC A+P+ + H + T + C+ + + E L V +I T+
Sbjct: 92 YRCNICGKTFAVPA--RLTRHYRTHTGEKPYQCEYCSKSF---SVKENLSVHRRIHTKER 146
Query: 311 PPKCNFCDQTFQKIGDAFRHV 373
P KC+ C++ F+ G RH+
Sbjct: 147 PYKCDVCERAFEHSGKLHRHM 167
Score = 27.1 bits (57), Expect = 0.11
Identities = 23/120 (19%), Positives = 43/120 (35%)
Frame = +2
Query: 140 YICTICPDHVALPSFSSIYEHIESSTHIETVCKLIRSALHPSDIDEELVVLNKISTEPPK 319
Y C C ++ S++ I + R+ H + + + P K
Sbjct: 120 YQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRI--HTGERPHK 177
Query: 320 CNFCDQTFQKIGDAFRHVLSSVEHQTAVAEAMLSDNRGDIISVYMKGNFVLHSEGVTFTC 499
C C +TF + G H+ + + V +A +G S +K + H+ +TC
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTHTGEKPYVCKAC---GKGFTCSKQLKVHTRTHTGEKPYTC 234
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 233 CKLIRSALHPSDI-DEELVVLNKISTEPPKCNFCDQTFQKIGDAFRH 370
C L + A ++ L K +P +CN C +TF RH
Sbjct: 64 CLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRH 110
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 308 EPPKCNFCDQTFQKIGDAFRHV 373
+P C+ CD+ F ++ + RH+
Sbjct: 36 KPYHCSHCDRQFVQVANLRRHL 57
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 395 TAVAEAMLSDNRGDIISVYMKGNFVLH---SEGVTFTCVS 505
++VA ++D+RG + V ++ + V+H E + CV+
Sbjct: 222 SSVANVRIADHRGVMPPVILENSGVVHVAQDESTSLVCVA 261
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 395 TAVAEAMLSDNRGDIISVYMKGNFVLH---SEGVTFTCVS 505
++VA ++D+RG + V ++ + V+H E + CV+
Sbjct: 222 SSVANVRIADHRGVMPPVILENSGVVHVAQDESTSLVCVA 261
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 3.2
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 393 KPPWLKRCYLTTEVI 437
+PPWL+ ++T E+I
Sbjct: 996 EPPWLEGVHVTPELI 1010
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 260 DEERSGLTCIQSLC 219
DE +SGL +QS+C
Sbjct: 20 DELKSGLHTVQSVC 33
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 5.6
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 195 YIDEKDGNATWSG 157
+ +EKDG W G
Sbjct: 257 FFEEKDGQVLWEG 269
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 5.6
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 195 YIDEKDGNATWSG 157
+ +EKDG W G
Sbjct: 257 FFEEKDGQVLWEG 269
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 7.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 62 YYGDAFSGVYG*TIPA 15
YYG+ FSG Y IPA
Sbjct: 432 YYGNRFSGEY--EIPA 445
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 348 FWKV*SQKLHLGGSVDILFRTTSSSSM 268
+W++ + + +++ FRTT SS M
Sbjct: 267 YWRIYNAAVSTTKAINQGFRTTKSSKM 293
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,222
Number of Sequences: 438
Number of extensions: 3613
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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