Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B03
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167 40 0.001
09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577 36 0.021
07_01_0351 - 2549466-2549978 36 0.028
07_01_0350 - 2541441-2541645,2541660-2541878,2542573-2542823 34 0.065
09_02_0094 + 4196729-4197571 34 0.086
06_01_1016 + 7944817-7945266,7945461-7945922 34 0.086
08_01_1053 - 10716970-10717474,10718259-10718323 33 0.15
08_01_0868 - 8466365-8466860,8467124-8467140 32 0.35
11_04_0412 + 17374651-17375196 31 0.61
08_02_1102 + 24319569-24319917,24320120-24321496,24321819-243220... 31 0.61
08_02_0082 + 12059692-12060209,12060484-12060973 31 0.61
12_01_0976 - 9821481-9821973,9822417-9822940 29 1.8
07_03_1203 - 24848342-24848885,24849199-24849204,24849648-248499... 29 3.2
01_01_0583 - 4321992-4322165,4322261-4322353,4322445-4322828,432... 29 3.2
11_04_0409 + 17345182-17345669,17346262-17346760 28 4.3
10_02_0152 - 5902554-5903058,5904171-5904670 28 4.3
06_03_0815 - 24905641-24905874,24905974-24906044,24906678-249068... 28 4.3
08_02_1426 + 27009720-27010787,27011846-27012517,27012999-270137... 28 5.6
11_04_0414 + 17386806-17387936 27 7.5
11_04_0062 - 13044020-13044417,13044614-13044749 27 7.5
08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128 27 7.5
04_04_0371 + 24771687-24772081,24772139-24772535,24773394-247734... 27 7.5
01_01_0732 - 5698863-5700413 27 7.5
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 27 9.9
>08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167
Length = 422
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
WNH +E Y + P+R L +RYE L+ P D++R +++F+G
Sbjct: 298 WNHILE--YWRASKANPSRVLFLRYERLLQDPTDSIRELAEFVG 339
>09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577
Length = 411
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 167 KWNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
+W H +E Y + P + L +RYE+++ RP LR +++F+G
Sbjct: 263 QWRHVLE--YWEASRRCPGKVLFLRYEDMLRRPASGLRKMAEFMG 305
>07_01_0351 - 2549466-2549978
Length = 170
Score = 35.5 bits (78), Expect = 0.028
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 FDLSSYRQCLSK--WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
F+ + +CLS W+H L Y P L +RYEEL+ P D++R +++F+G
Sbjct: 22 FESACEGRCLSSPIWDHI--LGYWNASKTRPETVLFLRYEELLHDPADSVRKLARFVG 77
>07_01_0350 - 2541441-2541645,2541660-2541878,2542573-2542823
Length = 224
Score = 34.3 bits (75), Expect = 0.065
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 155 QCLSK--WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
+CLS WNH V Y P L +RYEE++ P D R +++F+G
Sbjct: 90 RCLSGPIWNHIVG--YWNASKARPETVLFLRYEEMLQYPIDNFRKLARFVG 138
>09_02_0094 + 4196729-4197571
Length = 280
Score = 33.9 bits (74), Expect = 0.086
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +2
Query: 14 VLKMGTYVLELFPNAKFVFMVR---DGRATVHSIITRKVTITGFDLSSYRQCLSKWNHAV 184
V MG +++ L K F+ R D + + I T T F L W+H +
Sbjct: 99 VTTMGCHIIYLCREPKDAFISRWHFDNKIAQGAKINIDTTFTMF-LEGCSPFGPFWDHYL 157
Query: 185 ELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLGLRWDE 316
+ + K P L +RYEE+V P +R ++ F+G+ + E
Sbjct: 158 QYWKESLKR--PRDVLFLRYEEIVFDPLKVVRDLAGFIGVPFTE 199
>06_01_1016 + 7944817-7945266,7945461-7945922
Length = 303
Score = 33.9 bits (74), Expect = 0.086
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLGLRWDEA 319
W+H L Y + P L +RYEEL+ P +R +++F+GL + EA
Sbjct: 178 WDHI--LGYWHASTEVPDNVLFLRYEELLRDPAGNVRKMARFVGLPFSEA 225
>08_01_1053 - 10716970-10717474,10718259-10718323
Length = 189
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 158 CLSKWNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
C W+H L Y P+R L + YE+++ P T+R +++FLG
Sbjct: 61 CGPVWDHI--LGYWNASKKEPSRVLFLTYEQMLQDPMGTIRQLAEFLG 106
>08_01_0868 - 8466365-8466860,8467124-8467140
Length = 170
Score = 31.9 bits (69), Expect = 0.35
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
W+H L Y + + R L ++YEE++ P +T+R ++QF+G
Sbjct: 46 WDHL--LGYWRASKIDLGRVLFLKYEEVLRDPVNTVRELAQFVG 87
>11_04_0412 + 17374651-17375196
Length = 181
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
W H VE +++ + + L +RYEE++ P +R +++F+G
Sbjct: 39 WRHVVEY-WEESERRPNNKVLFLRYEEMIREPARNVRKLAEFVG 81
>08_02_1102 + 24319569-24319917,24320120-24321496,24321819-24322001,
24322147-24322460,24322515-24322631,24323057-24323313,
24323504-24323684,24323802-24324074,24324535-24324729
Length = 1081
Score = 31.1 bits (67), Expect = 0.61
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = +2
Query: 95 VHSIITRKVTITGFDLSSYRQCLSKWNHA----VELMYQQCKSLGPARCLTVRYEELVLR 262
+H +RK++ G +++ +Q N A E+M Q G + +RY+ L
Sbjct: 969 IHYKFSRKLSPIGGEVTGTQQKSPMPNKAGWIIEEVMELQGILFGDFFTIHIRYQIEDLA 1028
Query: 263 PRDTLRGVSQFLGLRWDEAVLHHER 337
P+ V FLG+ W + H +R
Sbjct: 1029 PKQRACSVQVFLGIEWSKTTRHRKR 1053
>08_02_0082 + 12059692-12060209,12060484-12060973
Length = 335
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
W++ +E Y + P R L + YE+++ P D ++ ++QFLG
Sbjct: 213 WDNILEFWY--ASNAEPTRVLFLTYEKVLQDPCDAVKKLAQFLG 254
>12_01_0976 - 9821481-9821973,9822417-9822940
Length = 338
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
W+H + + CK+ P + L + YE+L+ P + +R ++ FLG
Sbjct: 215 WDHIIGY-WNACKA-NPEKVLFLVYEDLLRDPANIVRKLADFLG 256
>07_03_1203 -
24848342-24848885,24849199-24849204,24849648-24849947,
24852725-24853047,24853076-24853255
Length = 450
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLGLRWDEA 319
W H L Y P + L ++YEE++ P + +++F+G + +A
Sbjct: 323 WEHI--LGYWNTSKAKPDKVLFLKYEEVLRDPTKNIEKITEFIGQPFSDA 370
>01_01_0583 -
4321992-4322165,4322261-4322353,4322445-4322828,
4322909-4322993,4323206-4323444,4323542-4323747,
4324052-4324163
Length = 430
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 242 YEELVLRPRDTLRGVSQFLGLRWDEAVLHHERYINQPNGVALSNVERS 385
Y EL + PR + V Q L +W + + P+G L N+ S
Sbjct: 112 YLELTVAPRKKISSVLQHLNTKWGNSQCARGELMLFPDGTRLDNINGS 159
>11_04_0409 + 17345182-17345669,17346262-17346760
Length = 328
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
W H +E + + P + L +RYEE+ +R +++F+G
Sbjct: 201 WRHVLEYWAESKRR--PQKVLFLRYEEMTRETTSNVRKLAEFMG 242
>10_02_0152 - 5902554-5903058,5904171-5904670
Length = 334
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLG 301
W+H L Y + P L ++YE++ P + + +++F+G
Sbjct: 208 WDHI--LGYWNASKVKPDNVLILKYEDMKRNPTENVEKIAEFIG 249
>06_03_0815 -
24905641-24905874,24905974-24906044,24906678-24906847,
24906862-24906955,24907904-24907948,24908599-24909631
Length = 548
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 170 WNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLGL 304
W H L Y + P R L +RYEE+ P +R +++F G+
Sbjct: 225 WEHV--LGYWRAHRERPERVLFLRYEEMKRDPAGHVRRLAEFAGV 267
>08_02_1426 + 27009720-27010787,27011846-27012517,27012999-27013793,
27014914-27014943,27018095-27019987
Length = 1485
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 323 LHHERYINQPNGVALSNVERSSDQVVRPVNLDALDKWVGQIPSDV 457
LHH +Y++ + N+ S ++ LD WV ++P+ +
Sbjct: 1125 LHHLKYLSLRGSATILNLPSSFGNLLNLETLDIRGTWVTKLPATI 1169
>11_04_0414 + 17386806-17387936
Length = 376
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 167 KWNHAVELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFL 298
+W+H E Y + P + L +RYEE++ P + +++FL
Sbjct: 245 QWHHVRE--YWEESRRRPEKVLFLRYEEMLREPARNVERLAEFL 286
>11_04_0062 - 13044020-13044417,13044614-13044749
Length = 177
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 320 VLHHERYINQPNGVALSNVERSSDQVVRPVNL 415
VLH +R N NVE SSD+ V+P+++
Sbjct: 128 VLHQKRIFELENEPWKLNVEPSSDEEVKPIHV 159
>08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128
Length = 1226
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 323 LHHERYINQPNGVALSNVERSSDQVVRPVNLDALDKWVGQIPSDV 457
LHH +Y++ + N+ S ++ LD WV ++P+ +
Sbjct: 874 LHHLKYLSLRGSFGVFNLPNSFGNLLNLETLDIRGTWVTKLPATI 918
>04_04_0371 +
24771687-24772081,24772139-24772535,24773394-24773435,
24773571-24774305,24775357-24775480,24775613-24776580,
24776917-24776925
Length = 889
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 474 SAMSARTSLGICPTHLSSASRFTGRTTWSEER 379
S A SLG+CPT L R G + W +
Sbjct: 555 SLKDAAKSLGVCPTTLKRICRHHGISRWPSRK 586
>01_01_0732 - 5698863-5700413
Length = 516
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 447 GICPTHLSSASRFTGRTTWSEERSTLESATPLGW 346
G+ PTH +A R T ++ S +S L S GW
Sbjct: 263 GLNPTHFLTALRHTVKSIRSFSKSMLNSMQSAGW 296
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 145 RQVEPGYSHLTGDDGVHGGASVAHHEHELRIREQLEHVRAHLQ 17
R++ G L + V GGA+ E R+ LEH+ HLQ
Sbjct: 92 RRLAAGVWRLRPPEAVAGGAAAGSGERR-RVHVGLEHIPRHLQ 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,061,127
Number of Sequences: 37544
Number of extensions: 238430
Number of successful extensions: 967
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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