Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_B03
         (549 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical...   230   6e-61
AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotei...   230   6e-61
U00051-6|AAK70644.1|  259|Caenorhabditis elegans Hypothetical pr...   114   3e-26
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr...    31   0.41 
Z81497-3|CAB04081.2|  593|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AC084154-6|AAO91684.1|  319|Caenorhabditis elegans Serpentine re...    27   6.7  

>AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical
           protein Y111B2A.15 protein.
          Length = 380

 Score =  230 bits (562), Expect = 6e-61
 Identities = 105/176 (59%), Positives = 135/176 (76%)
 Frame = +2

Query: 5   EALVLKMGTYVLELFPNAKFVFMVRDGRATVHSIITRKVTITGFDLSSYRQCLSKWNHAV 184
           +   +K   Y+ ELFPNAK++ M+RDGRATV+SII+RKVTITGFDL+ +RQC++KWN A+
Sbjct: 160 DPFTMKSAVYLKELFPNAKYLLMIRDGRATVNSIISRKVTITGFDLNDFRQCMTKWNAAI 219

Query: 185 ELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLGLRWDEAVLHHERYINQPNGVA 364
           ++M  QC+S+G   CL V YE+LVL P   +R +++FL + WD+ VLHHE+ I +   ++
Sbjct: 220 QIMVDQCESVGEKNCLKVYYEQLVLHPEAQMRRITEFLDIPWDDKVLHHEQLIGK--DIS 277

Query: 365 LSNVERSSDQVVRPVNLDALDKWVGQIPSDVRADMADLAPMLSVLGYDPWANPXRY 532
           LSNVERSSDQVV+PVNLDAL KWVG IP DV ADM  +APML  LGYDP ANP  Y
Sbjct: 278 LSNVERSSDQVVKPVNLDALIKWVGTIPEDVVADMDSVAPMLRRLGYDPNANPPNY 333


>AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotein
           sulfotransferase-A protein.
          Length = 380

 Score =  230 bits (562), Expect = 6e-61
 Identities = 105/176 (59%), Positives = 135/176 (76%)
 Frame = +2

Query: 5   EALVLKMGTYVLELFPNAKFVFMVRDGRATVHSIITRKVTITGFDLSSYRQCLSKWNHAV 184
           +   +K   Y+ ELFPNAK++ M+RDGRATV+SII+RKVTITGFDL+ +RQC++KWN A+
Sbjct: 160 DPFTMKSAVYLKELFPNAKYLLMIRDGRATVNSIISRKVTITGFDLNDFRQCMTKWNAAI 219

Query: 185 ELMYQQCKSLGPARCLTVRYEELVLRPRDTLRGVSQFLGLRWDEAVLHHERYINQPNGVA 364
           ++M  QC+S+G   CL V YE+LVL P   +R +++FL + WD+ VLHHE+ I +   ++
Sbjct: 220 QIMVDQCESVGEKNCLKVYYEQLVLHPEAQMRRITEFLDIPWDDKVLHHEQLIGK--DIS 277

Query: 365 LSNVERSSDQVVRPVNLDALDKWVGQIPSDVRADMADLAPMLSVLGYDPWANPXRY 532
           LSNVERSSDQVV+PVNLDAL KWVG IP DV ADM  +APML  LGYDP ANP  Y
Sbjct: 278 LSNVERSSDQVVKPVNLDALIKWVGTIPEDVVADMDSVAPMLRRLGYDPNANPPNY 333


>U00051-6|AAK70644.1|  259|Caenorhabditis elegans Hypothetical
           protein F42G9.8 protein.
          Length = 259

 Score =  114 bits (275), Expect = 3e-26
 Identities = 56/158 (35%), Positives = 88/158 (55%)
 Frame = +2

Query: 35  VLELFPNAKFVFMVRDGRATVHSIITRKVTITGFDLSSYRQCLSKWNHAVELMYQQCKSL 214
           +  L+PNAKF+ M+RD RA VHS+I RKV + G++ S       +WN  +  M  QC + 
Sbjct: 81  IRRLYPNAKFILMIRDARAVVHSMIERKVPVAGYNTSDEISMFVQWNQELRKMTFQCNN- 139

Query: 215 GPARCLTVRYEELVLRPRDTLRGVSQFLGLRWDEAVLHHERYINQPNGVALSNVERSSDQ 394
            P +C+ V YE L+ +P + +  ++ FL L + + +L H+  I   + V L++ E S+ Q
Sbjct: 140 APGQCIKVYYERLIQKPAEEILRITNFLDLPFSQQMLRHQDLIG--DEVDLNDQEFSASQ 197

Query: 395 VVRPVNLDALDKWVGQIPSDVRADMADLAPMLSVLGYD 508
           V   +N  AL  W      +    + D+AP L +LGYD
Sbjct: 198 VKNSINTKALTSWFDCFSEETLRKLDDVAPFLGILGYD 235


>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical protein
            F16B12.6 protein.
          Length = 1392

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -3

Query: 139  VEPGYSHLTGDDGVHGGASVAHHEHELRIREQLEH--VRAHLQHE 11
            VE G  ++  +  VH G  +  HE   R  E +EH  V+ HL+HE
Sbjct: 1338 VEEGVEYMQEELVVHPGNHLVGHEELGRHEEHIEHPEVQGHLEHE 1382


>Z81497-3|CAB04081.2|  593|Caenorhabditis elegans Hypothetical
           protein F10C2.6 protein.
          Length = 593

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -1

Query: 468 MSARTSLGICPTHLSSASRFTGRTTWSEERSTL---ESATPLGWL 343
           +SAR    IC   + S S +T RT   +E ST    E  + +GWL
Sbjct: 2   ISARNVTAICCRRILSTSSYTVRTHICDELSTSNKNEKVSVMGWL 46


>AC084154-6|AAO91684.1|  319|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 64 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +2

Query: 83  GRATVHSIITRKVTITGFD--LSSYRQCLSKWNHAVELMYQQCKSLGPARCLTVRYEELV 256
           G   +H++  R + +  FD  +   R  L  W++ V L+Y   K +     L V  E   
Sbjct: 104 GLINLHTLYYRTICLKSFDPKMIKRRNLLFFWHYLVPLVYLAIKFIPSPDHLAVHNETRT 163

Query: 257 LRP 265
           L P
Sbjct: 164 LHP 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,960,502
Number of Sequences: 27780
Number of extensions: 175737
Number of successful extensions: 677
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)