Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B02
(321 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 83 1e-15
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 79 1e-14
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 68 5e-11
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 66 1e-10
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 66 2e-10
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 60 9e-09
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 59 2e-08
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 59 2e-08
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 56 1e-07
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 52 2e-06
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 50 1e-05
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 49 2e-05
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 48 4e-05
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 46 2e-04
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 45 3e-04
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 39 0.025
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 36 0.17
UniRef50_Q55MY6 Cluster: Putative uncharacterized protein; n=2; ... 36 0.23
UniRef50_Q4DA27 Cluster: Peroxisome assembly protein, putative; ... 35 0.30
UniRef50_Q9SA70 Cluster: F10O3.18 protein; n=2; Arabidopsis thal... 35 0.40
UniRef50_A5AJU5 Cluster: Putative uncharacterized protein; n=1; ... 34 0.53
UniRef50_Q57U74 Cluster: Peroxisome assembly protein, putative; ... 34 0.53
UniRef50_A7PTW8 Cluster: Chromosome chr7 scaffold_31, whole geno... 34 0.70
UniRef50_Q17E23 Cluster: Short-chain dehydrogenase; n=4; Culicid... 34 0.70
UniRef50_Q17NT9 Cluster: Peroxisome assembly factor-2; n=2; Culi... 33 1.2
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 33 1.2
UniRef50_Q803I9 Cluster: Nuclear VCP-like; n=4; Deuterostomia|Re... 32 2.1
UniRef50_Q01WP8 Cluster: Putative uncharacterized protein precur... 31 3.7
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 31 3.7
UniRef50_P33760 Cluster: Peroxisomal biogenesis factor 6; n=8; S... 31 3.7
UniRef50_UPI00015B5BA5 Cluster: PREDICTED: similar to serine pro... 31 4.9
UniRef50_UPI00015553F0 Cluster: PREDICTED: hypothetical protein,... 31 4.9
UniRef50_UPI000049831E Cluster: AAA family ATPase; n=1; Entamoeb... 31 4.9
UniRef50_Q7ME21 Cluster: Putative uncharacterized protein VVA086... 31 4.9
UniRef50_Q04UV0 Cluster: Serine phosphatase RsbU, regulator of s... 31 4.9
UniRef50_A0FSA2 Cluster: Cyclic nucleotide-binding; n=1; Burkhol... 31 4.9
UniRef50_Q54GX5 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_P36966 Cluster: Peroxisomal biogenesis factor 6; n=1; Y... 31 4.9
UniRef50_UPI0000E4996F Cluster: PREDICTED: similar to peroxisoma... 31 6.5
UniRef50_Q4TBC8 Cluster: Chromosome undetermined SCAF7151, whole... 31 6.5
UniRef50_A7JRX8 Cluster: Possible outer membrane protein; n=2; P... 31 6.5
UniRef50_Q93X55 Cluster: Peroxin 6; n=1; Helianthus annuus|Rep: ... 31 6.5
UniRef50_Q4QFL5 Cluster: Putative uncharacterized protein; n=3; ... 31 6.5
UniRef50_UPI00015B634C Cluster: PREDICTED: similar to peroxisome... 30 8.6
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 30 8.6
UniRef50_UPI0000D55A9A Cluster: PREDICTED: similar to Nuclear va... 30 8.6
UniRef50_UPI0000660A42 Cluster: Leucine-rich repeat-containing p... 30 8.6
UniRef50_Q4QF14 Cluster: Peroxisome assembly protein, putative; ... 30 8.6
UniRef50_Q9C1E9 Cluster: Peroxisomal biogenesis factor 6; n=4; P... 30 8.6
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 83.0 bits (196), Expect = 1e-15
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSI++YNGGAV+AMKG++CVAIA + + + ++ F K LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGI-QAQMVTTDFQKIFPMGDRLYIGLAGLATD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
QTV QRLK R+NLYELK
Sbjct: 60 VQTVAQRLKFRLNLYELK 77
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 79.4 bits (187), Expect = 1e-14
Identities = 42/78 (53%), Positives = 50/78 (64%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSILA+NG AV+ M G+DC AIA V+ +S F K P LYVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTD-FTKVYSLGPRLYVGFPGLATD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
QTV QRL+ R N+YEL+
Sbjct: 60 NQTVFQRLQFRKNMYELR 77
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 67.7 bits (158), Expect = 5e-11
Identities = 37/78 (47%), Positives = 52/78 (66%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSI++YNGGA++AMKG++ VAIA + + + ++ F + LY+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGI-QAQMVTTDFQEIFPMGGWLYIGLAGLATD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
Q V Q LK ++NLYELK
Sbjct: 60 VQRVAQCLKFQLNLYELK 77
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 66.1 bits (154), Expect = 1e-10
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSI YNG AVVAM G++C AIA + L V ++ F + + LY+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATD-FQRVFKIHDKLYIGLSGLATD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
QT+ QRL R LY+L+
Sbjct: 60 AQTLYQRLVFRHKLYQLR 77
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +1
Query: 91 SILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDT 270
SI YNGG V+ M G CVAIA L + F K + + +YVGL GLATD
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 271 QTVLQRLKRRMNLYELK 321
QT+ + L+ R+NLYE++
Sbjct: 63 QTLYELLRYRVNLYEIR 79
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 60.1 bits (139), Expect = 9e-09
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = +1
Query: 91 SILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDT 270
SI++YNGGAV+AMKG++CVAIA + + + ++ F K LY+GL GLATD
Sbjct: 26 SIMSYNGGAVMAMKGKNCVAIAADRRFGI-QAQMVTTDFQKIFPMGDRLYIGLAGLATDV 84
Query: 271 QTVLQR 288
QTV R
Sbjct: 85 QTVPPR 90
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +1
Query: 91 SILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDT 270
SI+ YNGGA++AMKG++CVA A L + + F K R +G GLATD
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDI 60
Query: 271 QTVLQRLKRRMNLYELK 321
T+ +K + NLY L+
Sbjct: 61 HTLTNLIKFKTNLYHLR 77
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSI++Y GG VVAM G +CV IA + ++ K + +YVGL G +D
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQ-KKVHKVTDKVYVGLAGFQSD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
+TVL+++ R NLYEL+
Sbjct: 60 ARTVLEKIMFRKNLYELR 77
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 94 ILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQ 273
I +YNGGA+VAM G+ CVAIA + L +++ F K + + + GLATD Q
Sbjct: 18 ITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQ 77
Query: 274 TVLQRLKRRMNLYELK 321
T+ + ++N+Y+L+
Sbjct: 78 TLKDEIMFKVNMYKLR 93
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 52.4 bits (120), Expect = 2e-06
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 91 SILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDT 270
+I YNG A++ +KG DCVA+A + L S L+ + R + +GL GL TD
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 271 QTVLQRLKRRMNLYELK 321
T ++++ + NLY L+
Sbjct: 63 LTTYRQIRMKSNLYHLQ 79
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 50.0 bits (114), Expect = 1e-05
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = +1
Query: 94 ILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQ 273
++ YNG A+VAM G CV IA V + + K + +VG+ GLATD Q
Sbjct: 4 LMDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQ 63
Query: 274 TVLQRLKRRMNLYELK 321
T+ Q L R+ L+ L+
Sbjct: 64 TMAQLLDFRIKLFSLR 79
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 49.2 bits (112), Expect = 2e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +1
Query: 103 YNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVL 282
+ GG+++AM VAI + L +S +S F + R P LYVGLP DTQ +L
Sbjct: 7 FYGGSILAMASSKGVAIMCDKRLGMSSITVSKD-FTRIHRIGPRLYVGLPAFVPDTQVLL 65
Query: 283 QRLKRRMNLYELK 321
+++++ NL+ L+
Sbjct: 66 RKIRKNYNLFRLE 78
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 48.0 bits (109), Expect = 4e-05
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +1
Query: 121 VAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRR 300
VAM G+DCVAIA L +++ + + + K + L++GL GL D T+ Q+L+ +
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 301 MNLYELK 321
++YEL+
Sbjct: 70 HDMYELR 76
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 46.0 bits (104), Expect = 2e-04
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSIL Y+GG+ +AM G++C + L +S K + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEV-PKLHVINDGIVMGLTGLRTD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
QT Q++ R +Y+L+
Sbjct: 60 QQTFAQKVNFRTEMYKLR 77
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 45.2 bits (102), Expect = 3e-04
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 103 YNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVL 282
Y+GGAVV M G+ CVAIA + + + + F K + + G GL +D QT+
Sbjct: 8 YSGGAVVGMAGKGCVAIAADNRYGL-KYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMA 66
Query: 283 QRLKRRMNLYELK 321
+++K NLY L+
Sbjct: 67 EKVKYHANLYRLR 79
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = +1
Query: 79 DYKMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGL 258
++K S A+NGG V+A+ G+D +A T + + KC + T +G G
Sbjct: 24 EHKFSPYAFNGGTVLAVAGEDFALVA-SDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGF 82
Query: 259 ATDTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 83 HGDCLTLTKIIEARLKMYK 101
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 35.9 bits (79), Expect = 0.17
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +1
Query: 106 NGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQ 285
NGG++VA+ G D IA T + S + T K + P +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIA-ADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTG 86
Query: 286 RLKRRMNLYE 315
+K RM YE
Sbjct: 87 SIKVRMQSYE 96
>UniRef50_Q55MY6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1210
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNLY 312
+RP L P L+ R+D LY+ +P T ++L L R+ NL+
Sbjct: 1013 NRPDLLDPALLRPGRFDKMLYLSIPTTHTAQASILTALTRKFNLH 1057
>UniRef50_Q4DA27 Cluster: Peroxisome assembly protein, putative;
n=2; Trypanosoma cruzi|Rep: Peroxisome assembly protein,
putative - Trypanosoma cruzi
Length = 955
Score = 35.1 bits (77), Expect = 0.30
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNL 309
+RP L P+ L+ R+D Y+GLP + L+ L R+ NL
Sbjct: 814 NRPDLLDPSLLRPGRFDRLCYLGLPATREEQLVALRALTRKFNL 857
>UniRef50_Q9SA70 Cluster: F10O3.18 protein; n=2; Arabidopsis
thaliana|Rep: F10O3.18 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 983
Score = 34.7 bits (76), Expect = 0.40
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNLYE 315
+RP L P L+ R+D LYVG+ A+ + VL+ L R+ L E
Sbjct: 846 NRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSE 891
>UniRef50_A5AJU5 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1241
Score = 34.3 bits (75), Expect = 0.53
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNLYE 315
+RP L P L+ R+D LYVG+ + + VL+ L R+ L+E
Sbjct: 1105 NRPDLIDPALLRPGRFDKLLYVGVNSDTSYRERVLKALTRKFXLHE 1150
>UniRef50_Q57U74 Cluster: Peroxisome assembly protein, putative;
n=2; Trypanosoma brucei|Rep: Peroxisome assembly
protein, putative - Trypanosoma brucei
Length = 982
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNLYE 315
+RP L P L+ R+D Y+G+P ++ L+ L R+ +L E
Sbjct: 837 NRPDLLDPALLRPGRFDKLCYLGIPSTRSEQLVALRALTRKFHLAE 882
>UniRef50_A7PTW8 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 921
Score = 33.9 bits (74), Expect = 0.70
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNLYE 315
+RP L P L+ R+D LYVG+ + + VL+ L R+ L+E
Sbjct: 785 NRPDLIDPALLRPGRFDKLLYVGVNSDTSYRERVLKALTRKFMLHE 830
>UniRef50_Q17E23 Cluster: Short-chain dehydrogenase; n=4;
Culicidae|Rep: Short-chain dehydrogenase - Aedes aegypti
(Yellowfever mosquito)
Length = 326
Score = 33.9 bits (74), Expect = 0.70
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = -2
Query: 281 STVCVSVARPGSPTYNVGSHLEH--FRKVGGDSLGLDTTSVCP*AIATQSWPFIATTAP 111
S++ VA P S TY H H F + +S G+D T CP AT T P
Sbjct: 188 SSITGLVAFPNSATYTAAKHALHGYFETLQNESFGIDVTIFCPGPTATNFLQECFTNTP 246
>UniRef50_Q17NT9 Cluster: Peroxisome assembly factor-2; n=2;
Culicidae|Rep: Peroxisome assembly factor-2 - Aedes
aegypti (Yellowfever mosquito)
Length = 830
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNL 309
+RP L P L+ R+D LYVG D ++VLQ + + +L
Sbjct: 697 NRPDLIDPALLRPGRFDKLLYVGPSTSVDDKESVLQAITSKFHL 740
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 106 NGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQ 285
NGG V+ + G+D V +A L +S + K S+ +G G+ +D +T+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSY-SIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHS 95
Query: 286 RLKRRMNLYELK 321
LK+++ L+ L+
Sbjct: 96 LLKKKIELFVLE 107
>UniRef50_Q803I9 Cluster: Nuclear VCP-like; n=4; Deuterostomia|Rep:
Nuclear VCP-like - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 796
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKR 297
+RP + P L+ R D TLYVGLP A D +L + +
Sbjct: 664 NRPDIIDPAVLRPGRLDKTLYVGLPP-AADRHAILNTITK 702
>UniRef50_Q01WP8 Cluster: Putative uncharacterized protein
precursor; n=1; Solibacter usitatus Ellin6076|Rep:
Putative uncharacterized protein precursor - Solibacter
usitatus (strain Ellin6076)
Length = 612
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 199 VETVWAWIPQAFVRER*PHSLGPSSQQLHLHCTLVSTFYSL 77
V +AW Q RER P +L P S+Q+H+ TL T +L
Sbjct: 468 VNLAYAWSAQGTYRERAPLNL-PGSRQVHVEPTLAVTLQTL 507
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC + +G G
Sbjct: 29 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHG 87
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 88 DCLTLTKIIEARLKMYK 104
>UniRef50_P33760 Cluster: Peroxisomal biogenesis factor 6; n=8;
Saccharomycetaceae|Rep: Peroxisomal biogenesis factor 6 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1030
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNL 309
+RP L L+ R+D LY+G+P T +L+ L R+ L
Sbjct: 878 NRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVL 921
>UniRef50_UPI00015B5BA5 Cluster: PREDICTED: similar to serine
protease; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to serine protease - Nasonia vitripennis
Length = 2197
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 225 PSGTL*ESWWRQFGPGYHKRLSV-SDSHTVLALHRNNCTS 109
P GTL S WR GPG+ R S+ H V++ N T+
Sbjct: 781 PGGTLQPSTWRGMGPGFENRPSIPGRGHPVISEGANVLTT 820
>UniRef50_UPI00015553F0 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 905
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 151 IAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVL 282
+ +G L + P PP CS W ++ P LATDTQTVL
Sbjct: 575 VQYGAPLPAAPP---PPPESVCSHWTSRVHYSAP-LATDTQTVL 614
>UniRef50_UPI000049831E Cluster: AAA family ATPase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: AAA family ATPase - Entamoeba
histolytica HM-1:IMSS
Length = 624
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTV 279
+RP L L+ R+D LYVGLP L T Q V
Sbjct: 511 NRPDLLDEALLRPGRFDRILYVGLPDLDTRKQIV 544
>UniRef50_Q7ME21 Cluster: Putative uncharacterized protein VVA0863;
n=1; Vibrio vulnificus YJ016|Rep: Putative
uncharacterized protein VVA0863 - Vibrio vulnificus
(strain YJ016)
Length = 347
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 187 KLSPPTFLKCSRWDPTLYVGLPGLAT--DTQTVLQRLKRRMN 306
K+ P T+LK RW+ L+ LP + + + RLK R+N
Sbjct: 250 KIHPKTYLKGRRWEDQLFAALPEQSNQPSKSSQIDRLKGRIN 291
>UniRef50_Q04UV0 Cluster: Serine phosphatase RsbU, regulator of
sigma subunit; n=3; Leptospira|Rep: Serine phosphatase
RsbU, regulator of sigma subunit - Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
Length = 598
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 254 PGSPTYNVGSHLEHFRKVGGDSLGL 180
P SP Y + SH + + KVGGD L +
Sbjct: 382 PASPDYKIHSHFQPYVKVGGDILNV 406
>UniRef50_A0FSA2 Cluster: Cyclic nucleotide-binding; n=1;
Burkholderia phymatum STM815|Rep: Cyclic
nucleotide-binding - Burkholderia phymatum STM815
Length = 749
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -3
Query: 250 GAQHIMLG--PIWNTLGKLVETVW-AWIPQAFV 161
GA ++ G P W+TLG L + W AW+P F+
Sbjct: 176 GAFRVLTGESPRWHTLGLLTQLHWLAWVPALFI 208
>UniRef50_Q54GX5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1227
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNL 309
SRP L P L+ R D +LY +P + +L LK +MNL
Sbjct: 1010 SRPDLIDPALLRPGRLDKSLYCNIPEF-NERLDILTCLKSKMNL 1052
>UniRef50_P36966 Cluster: Peroxisomal biogenesis factor 6; n=1;
Yarrowia lipolytica|Rep: Peroxisomal biogenesis factor 6
- Yarrowia lipolytica (Candida lipolytica)
Length = 1024
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNL 309
+RP L L+ R+D LY+G+ QT+++ L R+ L
Sbjct: 866 NRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRL 909
>UniRef50_UPI0000E4996F Cluster: PREDICTED: similar to peroxisomal
biogenesis factor 6-like protein; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
peroxisomal biogenesis factor 6-like protein -
Strongylocentrotus purpuratus
Length = 956
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNL 309
+RP L P L+ R+D LY+G+ + +L L R+ N+
Sbjct: 824 NRPDLLDPALLRPGRFDKLLYLGVSKDRSSQSRILHALTRKFNV 867
>UniRef50_Q4TBC8 Cluster: Chromosome undetermined SCAF7151, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7151,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 795
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVL 282
+RP + P L+ R D LYVGLP A D ++L
Sbjct: 668 NRPDIIDPAILRPGRLDKILYVGLPS-AADRHSIL 701
>UniRef50_A7JRX8 Cluster: Possible outer membrane protein; n=2;
Pasteurellaceae|Rep: Possible outer membrane protein -
Mannheimia haemolytica PHL213
Length = 470
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 94 ILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLS 195
+L Y G + +KG AI H QT++ +PKL+
Sbjct: 93 LLRYAQGKIALLKGDYAQAIQHFQTILAKQPKLN 126
>UniRef50_Q93X55 Cluster: Peroxin 6; n=1; Helianthus annuus|Rep:
Peroxin 6 - Helianthus annuus (Common sunflower)
Length = 908
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNLYE 315
+RP L L+ R+D LYVG+ + + VL+ L R+ L+E
Sbjct: 771 NRPDLIDAALLRPGRFDKLLYVGVTTDPSYRERVLKALTRKFKLHE 816
>UniRef50_Q4QFL5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 560
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 109 GGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKC 216
GGA + M + CV + G T V++RP+ + P +C
Sbjct: 282 GGAAL-MSAEACVTVGAGLTRVLTRPEYAAPLLTRC 316
>UniRef50_UPI00015B634C Cluster: PREDICTED: similar to peroxisome
assembly factor-2 (peroxisomal-type atpase 1); n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to
peroxisome assembly factor-2 (peroxisomal-type atpase 1)
- Nasonia vitripennis
Length = 546
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNL 309
+RP L P L+ R+D LYVG+ VL+ L R L
Sbjct: 411 NRPDLIDPALLRPGRFDKMLYVGIYSDTESQMGVLKALTRHFRL 454
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 235 LYVGLPGLATDTQTVLQRLKRRMNLYEL 318
L + L GLAT+ QT Q LK ++NL EL
Sbjct: 16 LDISLTGLATNFQTTAQHLKFQLNLCEL 43
>UniRef50_UPI0000D55A9A Cluster: PREDICTED: similar to Nuclear
valosin-containing protein-like (Nuclear VCP-like
protein) (NVLp); n=2; Endopterygota|Rep: PREDICTED:
similar to Nuclear valosin-containing protein-like
(Nuclear VCP-like protein) (NVLp) - Tribolium castaneum
Length = 822
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKR 297
+RP + P L+ R+D L+VGLP A+D +L+ + R
Sbjct: 682 NRPDIVDPAVLRPGRFDKILFVGLP-TASDRIEILRAITR 720
>UniRef50_UPI0000660A42 Cluster: Leucine-rich repeat-containing
protein 31.; n=1; Takifugu rubripes|Rep: Leucine-rich
repeat-containing protein 31. - Takifugu rubripes
Length = 364
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 97 LAYNGGAVVAMKGQDCVAIAHGQTLVVSRP-KLSPPTFLKCSRWDPTLYVGLPGLATDTQ 273
++YNG V +G + A G L+ L P T CS W PTL LP L T+
Sbjct: 290 VSYNGS--VGHEGWSALFGAGGLGLLEDLDLSLRPSTSAPCSSWLPTLLRALPCLPALTR 347
Query: 274 TVLQR 288
QR
Sbjct: 348 LAAQR 352
>UniRef50_Q4QF14 Cluster: Peroxisome assembly protein, putative;
n=3; Leishmania|Rep: Peroxisome assembly protein,
putative - Leishmania major
Length = 959
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNL 309
+RP L P L+ R+D Y+G+P + L+ L R+ ++
Sbjct: 800 NRPDLLDPALLRPGRFDRLCYLGIPSTREEQLFALKALTRKFDM 843
>UniRef50_Q9C1E9 Cluster: Peroxisomal biogenesis factor 6; n=4;
Pezizomycotina|Rep: Peroxisomal biogenesis factor 6 -
Glomerella lagenarium (Anthracnose fungus)
(Colletotrichumlagenarium)
Length = 1388
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKRRMNLY 312
+RP L P L+ R+D LY+G+ +L+ L R+ L+
Sbjct: 1143 NRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLH 1187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,264,422
Number of Sequences: 1657284
Number of extensions: 6851792
Number of successful extensions: 16884
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 16494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16865
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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