Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_B02
(321 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-... 84 1e-16
BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome, ma... 83 2e-16
BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome, ma... 83 2e-16
DQ120692-1|ABB92464.1| 204|Homo sapiens rcPSMB3 protein. 68 7e-12
AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subun... 33 0.25
D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5 pro... 31 0.58
BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome, ma... 31 0.58
BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome, ma... 31 0.58
BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome, ma... 31 0.58
AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome, ma... 31 0.58
AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome, ma... 31 0.58
AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subun... 31 0.58
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 29 2.4
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 29 2.4
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 29 2.4
AK096949-1|BAC04909.1| 197|Homo sapiens protein ( Homo sapiens ... 28 7.2
BC035310-1|AAH35310.1| 323|Homo sapiens transmembrane protein 1... 27 9.5
BC018083-1|AAH18083.2| 324|Homo sapiens transmembrane protein 1... 27 9.5
BC014004-1|AAH14004.1| 400|Homo sapiens WD repeat and FYVE doma... 27 9.5
AL356275-1|CAI40193.1| 144|Homo sapiens chromosome 1 open readi... 27 9.5
AL139183-1|CAH73431.1| 400|Homo sapiens WD repeat and FYVE doma... 27 9.5
AL136525-1|CAH70585.1| 400|Homo sapiens WD repeat and FYVE doma... 27 9.5
AL035209-1|CAI18803.1| 144|Homo sapiens chromosome 1 open readi... 27 9.5
AK058149-1|BAB71687.1| 297|Homo sapiens protein ( Homo sapiens ... 27 9.5
AF411978-1|AAL04162.1| 400|Homo sapiens WD40- and FYVE-domain c... 27 9.5
AB083614-1|BAB89327.1| 302|Homo sapiens putative G-protein coup... 27 9.5
>D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-II
protein.
Length = 205
Score = 83.8 bits (198), Expect = 1e-16
Identities = 44/78 (56%), Positives = 55/78 (70%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSI++YNGGAV+AMKG++CVAIA + + + +L F K LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGI-QAQLVTTDFQKIFPMGDRLYIGLAGLATD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
QTV QRLK R+NLYELK
Sbjct: 60 VQTVAQRLKFRLNLYELK 77
>BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 83.0 bits (196), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSI++YNGGAV+AMKG++CVAIA + + + ++ F K LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGI-QAQMVTTDFQKIFPMGDRLYIGLAGLATD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
QTV QRLK R+NLYELK
Sbjct: 60 VQTVAQRLKFRLNLYELK 77
>BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 83.0 bits (196), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSI++YNGGAV+AMKG++CVAIA + + + ++ F K LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGI-QAQMVTTDFQKIFPMGDRLYIGLAGLATD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
QTV QRLK R+NLYELK
Sbjct: 60 VQTVAQRLKFRLNLYELK 77
>DQ120692-1|ABB92464.1| 204|Homo sapiens rcPSMB3 protein.
Length = 204
Score = 67.7 bits (158), Expect = 7e-12
Identities = 37/78 (47%), Positives = 52/78 (66%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLATD 267
MSI++YNGGA++AMKG++ VAIA + + + ++ F + LY+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGI-QAQMVTTDFQEIFPMGGWLYIGLAGLATD 59
Query: 268 TQTVLQRLKRRMNLYELK 321
Q V Q LK ++NLYELK
Sbjct: 60 VQRVAQCLKFQLNLYELK 77
>AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 241
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC R +G G
Sbjct: 29 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHG 87
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 88 DCLTLTKIIEARLKMYK 104
>D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5
protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC + +G G
Sbjct: 29 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHG 87
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 88 DCLTLTKIIEARLKMYK 104
>BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC + +G G
Sbjct: 29 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHG 87
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 88 DCLTLTKIIEARLKMYK 104
>BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC + +G G
Sbjct: 29 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHG 87
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 88 DCLTLTKIIEARLKMYK 104
>BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC + +G G
Sbjct: 29 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHG 87
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 88 DCLTLTKIIEARLKMYK 104
>AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC + +G G
Sbjct: 29 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHG 87
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 88 DCLTLTKIIEARLKMYK 104
>AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC + +G G
Sbjct: 29 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHG 87
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 88 DCLTLTKIIEARLKMYK 104
>AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 196
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIAHGQTLVVSRPKLSPPTFLKCSRWDPTLYVGLPGLAT 264
+ S +NGG ++A+ G+D AI T + + KC + +G G
Sbjct: 34 RFSPYVFNGGTILAIAGED-FAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHG 92
Query: 265 DTQTVLQRLKRRMNLYE 315
D T+ + ++ R+ +Y+
Sbjct: 93 DCLTLTKIIEARLKMYK 109
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKR 297
+RP + P L+ R D TL+VGLP A D +L+ + +
Sbjct: 619 NRPDIIDPAILRPGRLDKTLFVGLPPPA-DRLAILKTITK 657
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKR 297
+RP + P L+ R D TL+VGLP A D +L+ + +
Sbjct: 725 NRPDIIDPAILRPGRLDKTLFVGLPPPA-DRLAILKTITK 763
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 178 SRPKLSPPTFLKCSRWDPTLYVGLPGLATDTQTVLQRLKR 297
+RP + P L+ R D TL+VGLP A D +L+ + +
Sbjct: 528 NRPDIIDPAILRPGRLDKTLFVGLPPPA-DRLAILKTITK 566
>AK096949-1|BAC04909.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ39630 fis, clone SMINT2002202. ).
Length = 197
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 204 SWWRQFGPGYHKRLSVSDSHTVL 136
SWWR+ GPG +R+ +H ++
Sbjct: 105 SWWREHGPGCVRRVLPPSAHGMM 127
>BC035310-1|AAH35310.1| 323|Homo sapiens transmembrane protein 171
protein.
Length = 323
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 274 FVCQLQDQGAQHIMLGPIWNTLGKLVETVWAWIP 173
F+C Q AQ ++ G ++ T G L+ + W+P
Sbjct: 101 FICGESRQFAQCLIFGFLFLTSGMLISVLGIWVP 134
>BC018083-1|AAH18083.2| 324|Homo sapiens transmembrane protein 171
protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 274 FVCQLQDQGAQHIMLGPIWNTLGKLVETVWAWIP 173
F+C Q AQ ++ G ++ T G L+ + W+P
Sbjct: 101 FICGESRQFAQCLIFGFLFLTSGMLISVLGIWVP 134
>BC014004-1|AAH14004.1| 400|Homo sapiens WD repeat and FYVE domain
containing 2 protein.
Length = 400
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 93 DTSVQWRCSCCDEGPRLCGYRSRTNACGIQ 182
D W CS + G RL GYR+ A G+Q
Sbjct: 135 DKQFAWHCS--ESGQRLGGYRTSAVASGLQ 162
>AL356275-1|CAI40193.1| 144|Homo sapiens chromosome 1 open reading
frame 132 protein.
Length = 144
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +3
Query: 99 SVQWRCSCCDEGPRLCGYRSRTNACGIQAQTVSTNFP 209
S W C C P C Y T G + +S +P
Sbjct: 54 SQSWSCCCSTCSPNKCSYILMTQCIGSREMELSAEWP 90
>AL139183-1|CAH73431.1| 400|Homo sapiens WD repeat and FYVE domain
containing 2 protein.
Length = 400
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 93 DTSVQWRCSCCDEGPRLCGYRSRTNACGIQ 182
D W CS + G RL GYR+ A G+Q
Sbjct: 135 DKQFAWHCS--ESGQRLGGYRTSAVASGLQ 162
>AL136525-1|CAH70585.1| 400|Homo sapiens WD repeat and FYVE domain
containing 2 protein.
Length = 400
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 93 DTSVQWRCSCCDEGPRLCGYRSRTNACGIQ 182
D W CS + G RL GYR+ A G+Q
Sbjct: 135 DKQFAWHCS--ESGQRLGGYRTSAVASGLQ 162
>AL035209-1|CAI18803.1| 144|Homo sapiens chromosome 1 open reading
frame 132 protein.
Length = 144
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +3
Query: 99 SVQWRCSCCDEGPRLCGYRSRTNACGIQAQTVSTNFP 209
S W C C P C Y T G + +S +P
Sbjct: 54 SQSWSCCCSTCSPNKCSYILMTQCIGSREMELSAEWP 90
>AK058149-1|BAB71687.1| 297|Homo sapiens protein ( Homo sapiens
cDNA FLJ25420 fis, clone TST03665. ).
Length = 297
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 93 DTSVQWRCSCCDEGPRLCGYRSRTNACGIQ 182
D W CS + G RL GYR+ A G+Q
Sbjct: 32 DKQFAWHCS--ESGQRLGGYRTSAVASGLQ 59
>AF411978-1|AAL04162.1| 400|Homo sapiens WD40- and FYVE-domain
containing protein 2 protein.
Length = 400
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 93 DTSVQWRCSCCDEGPRLCGYRSRTNACGIQ 182
D W CS + G RL GYR+ A G+Q
Sbjct: 135 DKQFAWHCS--ESGQRLGGYRTSAVASGLQ 162
>AB083614-1|BAB89327.1| 302|Homo sapiens putative G-protein coupled
receptor protein.
Length = 302
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 274 FVCQLQDQGAQHIMLGPIWNTLGKLVETVWAWIP 173
F+C Q AQ ++ G ++ T G L+ + W+P
Sbjct: 101 FICGESRQFAQCLIFGFLFLTSGMLISVLGIWVP 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,865,908
Number of Sequences: 237096
Number of extensions: 1127998
Number of successful extensions: 2525
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2517
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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