Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_A23
(552 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0459 + 24533233-24533278,24533881-24534167,24534287-245345... 33 0.11
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 31 0.61
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 30 1.1
03_05_0473 - 24670411-24671259 30 1.1
02_05_0998 + 33391021-33391266,33391354-33391502,33391600-333916... 30 1.1
11_04_0442 - 17790811-17790889,17791047-17791114,17791144-177911... 28 4.3
11_04_0255 - 15422536-15422640,15422734-15422790,15422917-154230... 28 4.3
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 28 4.3
05_07_0175 - 28164252-28164529,28165381-28166560 28 4.3
01_01_0056 + 422141-422379,422524-422620,422697-422774,422871-42... 28 4.3
03_02_0312 - 7326092-7326148,7326415-7326540,7327744-7327821,732... 28 5.7
11_01_0357 + 2715271-2715509,2716200-2716281,2717117-2717251,271... 27 7.5
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 27 7.5
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 27 7.5
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 27 7.5
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 27 7.5
03_06_0573 - 34815576-34815785,34816117-34816327,34816448-348166... 27 7.5
08_02_1240 + 25504789-25504794,25505421-25505555,25505854-255059... 27 10.0
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203... 27 10.0
04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680 27 10.0
>03_05_0459 +
24533233-24533278,24533881-24534167,24534287-24534568,
24534628-24534682,24534895-24534935,24537484-24537549
Length = 258
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +3
Query: 225 LREESDFDHPRNQKWHPG-DRRSPIKPKDNL-----HTEGELDSWSSTKNMPEGARTQMK 386
LRE + D P +K P +S IK KD + H E + D + K + + K
Sbjct: 101 LRETAPIDLPSAEKGTPTISGKSKIKSKDKVKKHKRHKEKDKDKYKDQKKHKHRHKDRSK 160
Query: 387 PDSSKRTPEKSGPIHPKHNLQTNVDLIKHDESKHHENEIIKKTIDSK 527
++ EK K + + D KHHE ++ +D+K
Sbjct: 161 DKEKEKEKEKEK--EKKKDKSAHHDSGADRSKKHHEKVVLSTLLDAK 205
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 31.1 bits (67), Expect = 0.61
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +3
Query: 213 PKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPD 392
PKD R+ S R DRRSP + K + H +GE S +K ++ PD
Sbjct: 421 PKD--RKSSSEHKDRRSSSEQKDRRSPSERKGSNHGKGE----SKSKKRSSTSKDASSPD 474
Query: 393 SSKRTPEKSGPIHPKH 440
S P + ++ KH
Sbjct: 475 RSSAEPSEK-QLYDKH 489
>08_02_0550 +
18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/104 (22%), Positives = 39/104 (37%)
Frame = +3
Query: 105 DRPEQIKPKDNLHTDGDFYDRPKTQRQHGEIPNQIRPKDNLREESDFDHPRNQKWHPGDR 284
D PE P+ H D+P+ Q E+ Q + +E + HP ++ P
Sbjct: 499 DPPEDASPR---HQPEKQVDQPEKQADEPELAKQSNQPEKHADEPELAHPMPEQPEP--- 552
Query: 285 RSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEK 416
P+ K L E E+ + + E ++ K P+K
Sbjct: 553 EQPMLDKAELEREEEVVQEREKEVVQEREEEAVEEHKEKSAPKK 596
>03_05_0473 - 24670411-24671259
Length = 282
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +3
Query: 12 PGEIPTQVRPKDNLKPEGDFDRPQKSQWTSSDRPEQIKPKDNLHTDGDFYD-RPKTQRQH 188
P E P VR D + S SSD P D++ T+G+ D +P+
Sbjct: 104 PAEAPVAVRNDDEINEPPSAPAVTSSATPSSDNPPAFIASDDVATEGERPDQQPQEAATD 163
Query: 189 GEIPNQIRPKDNLREESDFD 248
GE + D+ +E+ D
Sbjct: 164 GETHGEAVKGDDDEDETASD 183
>02_05_0998 +
33391021-33391266,33391354-33391502,33391600-33391681,
33391808-33392223,33393659-33393854,33393932-33394074,
33394153-33394327,33394450-33394503,33394701-33394877,
33395832-33395944,33396083-33396265,33396570-33396632,
33396742-33396894,33396922-33396994,33397076-33397206,
33397285-33397420,33397504-33397581,33398146-33398262,
33398473-33398535,33398619-33398720
Length = 949
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 201 NQIRPKDNLREES---DFDHPRNQKWHPGDRRSPIKPKDNLHTEGELD 335
+Q K NL +E D+ H Q W+P +P K +D L + EL+
Sbjct: 446 SQYEEKGNLIKEVSWLDYGHKGMQVWYPSHGENPFKQEDFLQLDPELE 493
>11_04_0442 -
17790811-17790889,17791047-17791114,17791144-17791166,
17791210-17795913,17797414-17797624,17798478-17798666
Length = 1757
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 282 RRSPIKPKDNLHTEGELDSWSSTKNMPEGAR 374
++ P+KP++ + E+D W T P G R
Sbjct: 292 QKFPVKPENRVDKRAEIDEWVITLAFPYGQR 322
>11_04_0255 -
15422536-15422640,15422734-15422790,15422917-15423013,
15423155-15423222,15423299-15423344,15423467-15423621,
15423767-15423995,15424124-15424200,15425804-15425856,
15426082-15426139
Length = 314
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 278 SRVPLLVTWMIKVTLLSQVIFRTN-LIWYLTMLPLCFWSVVKIAVGMKVIFW 126
S P +T + K T + +I N L W L +LPL + + +G+ +FW
Sbjct: 16 SAFPASITLVRKSTFIIIIIIHVNNLQWILALLPL----IKALQMGLSCLFW 63
>10_08_0429 + 17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 266 LLVTWMIKVTLLSQVIFRTNLIWYLTMLPLCFWSVVKIAVGMKVIFW 126
LL+ WM + S +FR + YLT PL F + ++ + ++ W
Sbjct: 1412 LLLLWMGRQQQTSIALFRQSPCTYLTQQPLHFKCLERLKIRLRESTW 1458
>05_07_0175 - 28164252-28164529,28165381-28166560
Length = 485
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 179 LCFWSVVKIAVGMKVIFWLNLFWSIG*C 96
LCF + + VG K+ N+FW +G C
Sbjct: 158 LCFGAAIVSDVGQKLAQRCNVFWELGDC 185
>01_01_0056 +
422141-422379,422524-422620,422697-422774,422871-422930,
423019-423123,423743-423856,424145-424186,424380-424496,
424568-424755,425502-425785,425869-425990,426118-426160,
426265-426356,427331-427379,427623-427693,427793-427912,
428586-428674,429266-429311,429926-429973
Length = 667
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 166 DQKHKGNMVRYQIKFVRKITCERRVTLIIHVT 261
D+K KG +VR+ RKITC+ +I T
Sbjct: 523 DRKRKGEIVRFYANDQRKITCDPETKELIKRT 554
>03_02_0312 -
7326092-7326148,7326415-7326540,7327744-7327821,
7327916-7328178,7328699-7328741,7329581-7329632,
7329705-7329871,7330135-7330194,7330291-7330374,
7330654-7330758,7330840-7330899,7330976-7331032
Length = 383
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 279 DRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHPKHNLQTN 455
++++P KP + EG S S + + EG+ T K S RT K G H + N +N
Sbjct: 159 NKKAPAKPSASSSNEGSSHSESGSGSSSEGSSTNSK--SGSRT--KDGSEHGQGNDASN 213
>11_01_0357 +
2715271-2715509,2716200-2716281,2717117-2717251,
2717428-2717457,2717486-2717661,2717743-2717894,
2718395-2719083
Length = 500
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 201 NQIRPKDNLRE-ESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKN-MPEGAR 374
N + P+ + +DHP +K + R +D E + SST + M + +
Sbjct: 324 NHLAPRQSSTPGHQGYDHPHPEKQNSSQRVPQNDARDGTANSNEGPNMSSTMDAMKKIDK 383
Query: 375 TQMKPDSSKRTPEKSGPIHPKHNLQTNVDLIKHD 476
++K KR K G + K ++ + DLI+ +
Sbjct: 384 DKVKAALEKRRKSK-GDVAKKVDIMDDDDLIERE 416
>08_02_0678 - 19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 97 HHPIDQNRLSQKITFIPTAIFTTDQKHKGNMVRYQIKF 210
H P D +KI + PT IFT +QK + +R + +F
Sbjct: 1080 HDPKDDE--DRKIQWCPTGIFTKNQKRRVQRLRSRKRF 1115
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 201 NQIRPKDNLREESD-FDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGART 377
+++R DN+ + ++ RNQ++ +S K + H + +L S ++ R
Sbjct: 465 SRVRWHDNVDKRAEQTSEERNQRYSSSVVQS-FDEKKHDHDDAQLISVRDSRIGTRDVRV 523
Query: 378 QMKPDSSKRTPEKSGPIHPKHNLQTNVDLIKHDESKHHENEIIKKTIDSKVFSSHD 545
+ D++ + K+ I HN + D+S++ +I++ + + HD
Sbjct: 524 ITEDDANLASSSKNTMISKHHNTVDQKSTTRKDDSRNRSQKIMELSEVRGTNTEHD 579
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 18 EIPTQVRPKDNLKPEGDFDRPQKSQWTSSDRPEQIKPKDNLHTDGDFYDRPKTQRQ 185
E+ T P N KP+ RP+K + + K NL TD + YD P +RQ
Sbjct: 454 EVVTNEEPPANDKPKRGRGRPRKQKPQDGLELTEKKSTSNLSTD-NAYDHP-AERQ 507
>04_04_1079 -
30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +3
Query: 225 LREESDFDHPRNQKWHPGDRRS---PIKPKDNLHTEGELD 335
LREE KW PGDR +KP D +H +LD
Sbjct: 451 LREEGIILKDLESKWEPGDRSGKWLKLKP-DYIHAGADLD 489
>03_06_0573 -
34815576-34815785,34816117-34816327,34816448-34816623,
34816701-34816882,34817431-34817580,34817654-34817894
Length = 389
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +1
Query: 64 AILTGLKNLNGHHPIDQNRLSQKITFIPTAIFTTDQKHKGNMV 192
++L L ++ HH +D N + F+P A T ++K ++
Sbjct: 49 SLLHLLHKISDHHSLDLNETGKDARFLPRAYLWTKLRYKPGVI 91
>08_02_1240 +
25504789-25504794,25505421-25505555,25505854-25505964,
25506091-25506183,25506264-25506884,25506970-25507143,
25507239-25507464,25507560-25507651,25507744-25507842,
25507936-25507984,25508071-25508124,25508312-25508484,
25508561-25508632,25508713-25508808,25509032-25509048,
25509704-25509875,25509973-25510071,25510381-25510484,
25510940-25511126,25511212-25511220
Length = 862
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +3
Query: 273 PGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHPKHNL-- 446
P + +P+ L++ E+ + + M + +T P + EK+ + ++N
Sbjct: 501 PNEEFNPVNKSTILNSSEEIKHINIDEIMTKLNKTGHVPINPPDETEKNSALTARNNQVF 560
Query: 447 --QTNVDLIKHDESKHHENEIIKKTI 518
Q + + D+ HHEN+ KK I
Sbjct: 561 HDQPSFKIWDSDDDLHHENDDFKKEI 586
>07_01_0276 +
2028983-2029070,2030084-2030151,2030317-2031246,
2031334-2031415,2031544-2031609,2032606-2033304,
2033422-2035424,2035599-2036173,2037060-2037223,
2037306-2037365,2037475-2037839
Length = 1699
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/82 (23%), Positives = 33/82 (40%)
Frame = +3
Query: 15 GEIPTQVRPKDNLKPEGDFDRPQKSQWTSSDRPEQIKPKDNLHTDGDFYDRPKTQRQHGE 194
G P Q R D+ EG++D+ + ++W++ P + ++ GD R+ G
Sbjct: 141 GRRPPQERWSDSGNKEGNYDQRRDNKWSARRGPNDKESENWRDRWGDSGKDGDAAREKGF 200
Query: 195 IPNQIRPKDNLREESDFDHPRN 260
KD E D + N
Sbjct: 201 SHYIAHGKDGNSHEKDAERDDN 222
>04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680
Length = 936
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 372 SHLPAYFLLKTMNLIHLLCANYPSV*LGCDDLQGATFGYVD 250
SHL + LK +NLI + C + S+ LG + GY+D
Sbjct: 863 SHLGSSMTLKGLNLILIRCPDLISI-LGAISVSEIESGYID 902
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,290,903
Number of Sequences: 37544
Number of extensions: 309332
Number of successful extensions: 917
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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