Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_A23
(552 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 42 0.002
BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 42 0.002
AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens ... 40 0.004
BC065279-1|AAH65279.1| 375|Homo sapiens IWS1 protein protein. 40 0.008
AJ242976-1|CAB45133.1| 380|Homo sapiens p241 protein protein. 35 0.17
U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated pr... 33 0.67
U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated pr... 33 0.67
U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated pr... 33 0.67
BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein. 33 0.67
AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related p... 33 0.67
U33822-1|AAC52059.1| 803|Homo sapiens TXBP181 protein. 32 1.5
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 1.5
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 32 1.5
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 1.5
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 32 1.5
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 1.5
BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein pr... 31 2.0
BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein pr... 31 2.0
BC146821-1|AAI46822.1| 1176|Homo sapiens Unknown (protein for IM... 31 2.0
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 2.0
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 2.0
AK126804-1|BAC86701.1| 969|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens ... 31 2.0
AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein. 31 2.0
AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein. 31 2.0
AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein. 31 2.0
AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein. 31 2.0
BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein. 31 3.6
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 31 3.6
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 31 3.6
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 31 3.6
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 31 3.6
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 31 3.6
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 31 3.6
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 31 3.6
AK124773-1|BAC85942.1| 841|Homo sapiens protein ( Homo sapiens ... 29 8.2
>BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 41.5 bits (93), Expect = 0.002
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 5/167 (2%)
Frame = +3
Query: 39 PKDNLKPEGDFDRPQKSQWTSSDRPEQIKPKDNLHTDGDFYDRPKTQRQHGEIPNQIRPK 218
PK + + + + P + Q + S+ E KP+ + D + D P+ Q E N+ PK
Sbjct: 217 PKPQVS-DSESEEPPRHQASDSENEELPKPRIS---DSESEDPPRHQASDSE--NEELPK 270
Query: 219 DNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSS 398
+ + D PRNQ + P + +EG +S + +R + KP+S
Sbjct: 271 PRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPESD 330
Query: 399 KRTP-EKSGPIHPKHN----LQTNVDLIKHDESKHHENEIIKKTIDS 524
+ E G N +++D K S E E K+ +DS
Sbjct: 331 DDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDS 377
>BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 41.5 bits (93), Expect = 0.002
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 5/167 (2%)
Frame = +3
Query: 39 PKDNLKPEGDFDRPQKSQWTSSDRPEQIKPKDNLHTDGDFYDRPKTQRQHGEIPNQIRPK 218
PK + + + + P + Q + S+ E KP+ + D + D P+ Q E N+ PK
Sbjct: 217 PKPQVS-DSESEEPPRHQASDSENEELPKPRIS---DSESEDPPRHQASDSE--NEELPK 270
Query: 219 DNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSS 398
+ + D PRNQ + P + +EG +S + +R + KP+S
Sbjct: 271 PRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPESD 330
Query: 399 KRTP-EKSGPIHPKHN----LQTNVDLIKHDESKHHENEIIKKTIDS 524
+ E G N +++D K S E E K+ +DS
Sbjct: 331 DDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDS 377
>AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens
cDNA FLJ14655 fis, clone NT2RP2002292. ).
Length = 819
Score = 40.3 bits (90), Expect = 0.004
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 5/167 (2%)
Frame = +3
Query: 39 PKDNLKPEGDFDRPQKSQWTSSDRPEQIKPKDNLHTDGDFYDRPKTQRQHGEIPNQIRPK 218
PK + + + + P + Q + S+ E +P+ + D + D P+ Q E N+ PK
Sbjct: 217 PKPQVS-DSESEEPPRHQASDSENEELPRPRIS---DSESEDPPRHQASDSE--NEELPK 270
Query: 219 DNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSS 398
+ + D PRNQ + P + +EG +S + +R + KP+S
Sbjct: 271 PRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPESD 330
Query: 399 KRTP-EKSGPIHPKHN----LQTNVDLIKHDESKHHENEIIKKTIDS 524
+ E G N +++D K S E E K+ +DS
Sbjct: 331 DDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDS 377
>BC065279-1|AAH65279.1| 375|Homo sapiens IWS1 protein protein.
Length = 375
Score = 39.5 bits (88), Expect = 0.008
Identities = 29/119 (24%), Positives = 51/119 (42%)
Frame = +3
Query: 39 PKDNLKPEGDFDRPQKSQWTSSDRPEQIKPKDNLHTDGDFYDRPKTQRQHGEIPNQIRPK 218
PK + + + + P + Q + S+ E KP+ + D + D P+ Q E N+ PK
Sbjct: 217 PKPQVS-DSESEEPPRHQASDSENEELPKPRIS---DSESEDPPRHQASDSE--NEELPK 270
Query: 219 DNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDS 395
+ + D PRNQ + P + +EG +S + +R + KP+S
Sbjct: 271 PRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPES 329
>AJ242976-1|CAB45133.1| 380|Homo sapiens p241 protein protein.
Length = 380
Score = 35.1 bits (77), Expect = 0.17
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Frame = +3
Query: 129 KDNLHTDGDFYDRPKTQRQHGEIPNQIRPKDNLREESDFDHPRNQKWHPG---DRRSPIK 299
+D+ H G+ + R +R+ G P+ R + + R SD+D R H RSP +
Sbjct: 69 RDHSHGRGERH-RSLDRRERGRSPD--RRRQDSRYRSDYDRGRTPSRHRSYERSSRSPSR 125
Query: 300 PKDNLHTEGELDSWSSTKNMPEGAR-TQMKPDSSKRT-PEKS 419
K E E D WS ++ + T +K + T P+K+
Sbjct: 126 EKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKN 167
>U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated protein
1A protein.
Length = 1604
Score = 33.1 bits (72), Expect = 0.67
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +3
Query: 270 HPGDRRSPIKPKDNLHTEGELDSWSSTKNMP-----EGARTQMKPDSSKRTPEKSGPIHP 434
H +SP++ K E DSW TK P + A +KP + T EK + P
Sbjct: 930 HTPFHQSPVEEKSEPQDFQEADSWGDTKRTPGVGKEDAAEETVKPGPEEGTLEKEEKVPP 989
Query: 435 KHNLQTNVDLIKHDE 479
+ Q + DE
Sbjct: 990 PRSPQAQEAPVNIDE 1004
>U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 33.1 bits (72), Expect = 0.67
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +3
Query: 270 HPGDRRSPIKPKDNLHTEGELDSWSSTKNMP-----EGARTQMKPDSSKRTPEKSGPIHP 434
H +SP++ K E DSW TK P + A +KP + T EK + P
Sbjct: 1007 HTPFHQSPVEEKSEPQDFKEADSWGDTKRTPGVGKEDAAEETVKPGPEEGTLEKEEKVPP 1066
Query: 435 KHNLQTNVDLIKHDE 479
+ Q + DE
Sbjct: 1067 PRSPQAQEAPVNIDE 1081
>U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 33.1 bits (72), Expect = 0.67
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +3
Query: 270 HPGDRRSPIKPKDNLHTEGELDSWSSTKNMP-----EGARTQMKPDSSKRTPEKSGPIHP 434
H +SP++ K E DSW TK P + A +KP + T EK + P
Sbjct: 1007 HTPFHQSPVEEKSEPQDFKEADSWGDTKRTPGVGKEDAAEETVKPGPEEGTLEKEEKVPP 1066
Query: 435 KHNLQTNVDLIKHDE 479
+ Q + DE
Sbjct: 1067 PRSPQAQEAPVNIDE 1081
>BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein.
Length = 765
Score = 33.1 bits (72), Expect = 0.67
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 33 VRPKDNLK-PEGDFDRPQK---SQWTSSDRPEQIKPKDNLHTDGDFYDRPKTQ--RQHGE 194
+R DN K P+ DF +P + + S + P+D H+ DF RP+ + R+ E
Sbjct: 534 LRQLDNFKHPQRDFRQPDRHPPEDFRHSSEDFRFPPEDFRHSPEDFR-RPREEDFRRPSE 592
Query: 195 IPNQIRPKDNLR--EESDFDHPRNQKW 269
+ +++ R E DF HPR + W
Sbjct: 593 EDFRRPWEEDFRCPPEDDFRHPREEDW 619
>AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related
protein P80 protein.
Length = 1825
Score = 33.1 bits (72), Expect = 0.67
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +3
Query: 270 HPGDRRSPIKPKDNLHTEGELDSWSSTKNMP-----EGARTQMKPDSSKRTPEKSGPIHP 434
H +SP++ K E DSW TK P + A +KP + T EK + P
Sbjct: 1007 HTPFHQSPVEEKSEPQDFQEADSWGDTKRTPGVGKEDAAEETVKPGPEEGTLEKEEKVPP 1066
Query: 435 KHNLQTNVDLIKHDE 479
+ Q + DE
Sbjct: 1067 PRSPQAQEAPVNIDE 1081
>U33822-1|AAC52059.1| 803|Homo sapiens TXBP181 protein.
Length = 803
Score = 31.9 bits (69), Expect = 1.5
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = +3
Query: 270 HPGDRRS-----PIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHP 434
HPGD S P P+ + + W+S+ GART P SS R+P S P
Sbjct: 657 HPGDCSSSRPPAPRVPRCSYWRQSSHTPWASSSRCTCGARTASLP-SSARSPSSSSAARP 715
Query: 435 KHNLQ 449
+LQ
Sbjct: 716 WRSLQ 720
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.9 bits (69), Expect = 1.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 213 PKDNLREESDFDH-PRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKP 389
P+ + ES +H P+++ G R SP +PK T S S+ + AR +
Sbjct: 1649 PEGSSSTESSPEHPPKSRTARRGSRSSP-EPKTKSRTPPRRRSSRSSPELTRKARLSRRS 1707
Query: 390 DSSKRTPEKSGPIHPKHNLQTNV 458
S+ +PE P+H +V
Sbjct: 1708 RSASSSPETRSRTPPRHRRSPSV 1730
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.9 bits (69), Expect = 1.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 213 PKDNLREESDFDH-PRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKP 389
P+ + ES +H P+++ G R SP +PK T S S+ + AR +
Sbjct: 681 PEGSSSTESSPEHPPKSRTARRGSRSSP-EPKTKSRTPPRRRSSRSSPELTRKARLSRRS 739
Query: 390 DSSKRTPEKSGPIHPKHNLQTNV 458
S+ +PE P+H +V
Sbjct: 740 RSASSSPETRSRTPPRHRRSPSV 762
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.9 bits (69), Expect = 1.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 213 PKDNLREESDFDH-PRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKP 389
P+ + ES +H P+++ G R SP +PK T S S+ + AR +
Sbjct: 1649 PEGSSSTESSPEHPPKSRTARRGSRSSP-EPKTKSRTPPRRRSSRSSPELTRKARLSRRS 1707
Query: 390 DSSKRTPEKSGPIHPKHNLQTNV 458
S+ +PE P+H +V
Sbjct: 1708 RSASSSPETRSRTPPRHRRSPSV 1730
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.9 bits (69), Expect = 1.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 213 PKDNLREESDFDH-PRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKP 389
P+ + ES +H P+++ G R SP +PK T S S+ + AR +
Sbjct: 172 PEGSSSTESSPEHPPKSRTARRGSRSSP-EPKTKSRTPPRRRSSRSSPELTRKARLSRRS 230
Query: 390 DSSKRTPEKSGPIHPKHNLQTNV 458
S+ +PE P+H +V
Sbjct: 231 RSASSSPETRSRTPPRHRRSPSV 253
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.9 bits (69), Expect = 1.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 213 PKDNLREESDFDH-PRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKP 389
P+ + ES +H P+++ G R SP +PK T S S+ + AR +
Sbjct: 1697 PEGSSSTESSPEHPPKSRTARRGSRSSP-EPKTKSRTPPRRRSSRSSPELTRKARLSRRS 1755
Query: 390 DSSKRTPEKSGPIHPKHNLQTNV 458
S+ +PE P+H +V
Sbjct: 1756 RSASSSPETRSRTPPRHRRSPSV 1778
>BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein
protein.
Length = 1175
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +3
Query: 27 TQVRPKDNLKPEGDFD----RPQKSQWTSSDRPEQIKPKDNLHTD-----GDFYDRPKTQ 179
+ +P DN + G + RP+ + RPE K K + H + GD RP+T
Sbjct: 679 SDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGD--GRPETP 736
Query: 180 RQHGEI-PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTE 323
+Q GE P + K+ R E+ H + + G + KP+ + H +
Sbjct: 737 KQKGESRPETPKQKNEGRPETP-KHRHDNRRDSGKPSTEKKPEVSKHKQ 784
>BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein
protein.
Length = 1175
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +3
Query: 27 TQVRPKDNLKPEGDFD----RPQKSQWTSSDRPEQIKPKDNLHTD-----GDFYDRPKTQ 179
+ +P DN + G + RP+ + RPE K K + H + GD RP+T
Sbjct: 679 SDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGD--GRPETP 736
Query: 180 RQHGEI-PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTE 323
+Q GE P + K+ R E+ H + + G + KP+ + H +
Sbjct: 737 KQKGESRPETPKQKNEGRPETP-KHRHDNRRDSGKPSTEKKPEVSKHKQ 784
>BC146821-1|AAI46822.1| 1176|Homo sapiens Unknown (protein for
IMAGE:8860431) protein.
Length = 1176
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +3
Query: 27 TQVRPKDNLKPEGDFD----RPQKSQWTSSDRPEQIKPKDNLHTD-----GDFYDRPKTQ 179
+ +P DN + G + RP+ + RPE K K + H + GD RP+T
Sbjct: 679 SDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGD--GRPETP 736
Query: 180 RQHGEI-PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTE 323
+Q GE P + K+ R E+ H + + G + KP+ + H +
Sbjct: 737 KQKGESRPETPKQKNEGRPETP-KHRHDNRRDSGKPSTEKKPEVSKHKQ 784
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 2.0
Identities = 19/81 (23%), Positives = 34/81 (41%)
Frame = +3
Query: 198 PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGART 377
P + P+ N ++E + + R + RS + + HT S ++ P R
Sbjct: 256 PKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRRRPSPRR- 314
Query: 378 QMKPDSSKRTPEKSGPIHPKH 440
+P +RTP + P P+H
Sbjct: 315 --RPSPRRRTPPRRMPPPPRH 333
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 2.0
Identities = 19/81 (23%), Positives = 34/81 (41%)
Frame = +3
Query: 198 PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGART 377
P + P+ N ++E + + R + RS + + HT S ++ P R
Sbjct: 256 PKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRRRPSPRR- 314
Query: 378 QMKPDSSKRTPEKSGPIHPKH 440
+P +RTP + P P+H
Sbjct: 315 --RPSPRRRTPPRRMPPPPRH 333
>AK126804-1|BAC86701.1| 969|Homo sapiens protein ( Homo sapiens
cDNA FLJ44854 fis, clone BRACE3052410, highly similar
to Homo sapiens IDN3 protein (IDN3). ).
Length = 969
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +3
Query: 27 TQVRPKDNLKPEGDFD----RPQKSQWTSSDRPEQIKPKDNLHTD-----GDFYDRPKTQ 179
+ +P DN + G + RP+ + RPE K K + H + GD RP+T
Sbjct: 547 SDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGD--GRPETP 604
Query: 180 RQHGEI-PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTE 323
+Q GE P + K+ R E+ H + + G + KP+ + H +
Sbjct: 605 KQKGESRPETPKQKNEGRPETP-KHRHDNRRDSGKPSTEKKPEVSKHKQ 652
>AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ10006 fis, clone HEMBA1000168, weakly similar to
CYLICIN I. ).
Length = 489
Score = 31.5 bits (68), Expect = 2.0
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
Frame = +3
Query: 174 TQRQHGEIPNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTK 353
++ + + N+ PK + + D PRNQ + P + +EG +S
Sbjct: 49 SENETSDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDS 108
Query: 354 NMPEGARTQMKPDSSKRTP-EKSGPIHPKHN----LQTNVDLIKHDESKHHENEIIKKTI 518
+ +R + KP+S + E G N +++D K S E E K+ +
Sbjct: 109 ETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKM 168
Query: 519 DS 524
DS
Sbjct: 169 DS 170
>AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.
Length = 2697
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +3
Query: 27 TQVRPKDNLKPEGDFD----RPQKSQWTSSDRPEQIKPKDNLHTD-----GDFYDRPKTQ 179
+ +P DN + G + RP+ + RPE K K + H + GD RP+T
Sbjct: 679 SDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGD--GRPETP 736
Query: 180 RQHGEI-PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTE 323
+Q GE P + K+ R E+ H + + G + KP+ + H +
Sbjct: 737 KQKGESRPETPKQKNEGRPETP-KHRHDNRRDSGKPSTEKKPEVSKHKQ 784
>AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.
Length = 2804
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +3
Query: 27 TQVRPKDNLKPEGDFD----RPQKSQWTSSDRPEQIKPKDNLHTD-----GDFYDRPKTQ 179
+ +P DN + G + RP+ + RPE K K + H + GD RP+T
Sbjct: 679 SDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGD--GRPETP 736
Query: 180 RQHGEI-PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTE 323
+Q GE P + K+ R E+ H + + G + KP+ + H +
Sbjct: 737 KQKGESRPETPKQKNEGRPETP-KHRHDNRRDSGKPSTEKKPEVSKHKQ 784
>AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.
Length = 2158
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +3
Query: 27 TQVRPKDNLKPEGDFD----RPQKSQWTSSDRPEQIKPKDNLHTD-----GDFYDRPKTQ 179
+ +P DN + G + RP+ + RPE K K + H + GD RP+T
Sbjct: 140 SDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGD--GRPETP 197
Query: 180 RQHGEI-PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTE 323
+Q GE P + K+ R E+ H + + G + KP+ + H +
Sbjct: 198 KQKGESRPETPKQKNEGRPETP-KHRHDNRRDSGKPSTEKKPEVSKHKQ 245
>AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.
Length = 2265
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +3
Query: 27 TQVRPKDNLKPEGDFD----RPQKSQWTSSDRPEQIKPKDNLHTD-----GDFYDRPKTQ 179
+ +P DN + G + RP+ + RPE K K + H + GD RP+T
Sbjct: 140 SDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGD--GRPETP 197
Query: 180 RQHGEI-PNQIRPKDNLREESDFDHPRNQKWHPGDRRSPIKPKDNLHTE 323
+Q GE P + K+ R E+ H + + G + KP+ + H +
Sbjct: 198 KQKGESRPETPKQKNEGRPETP-KHRHDNRRDSGKPSTEKKPEVSKHKQ 245
>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
Length = 1192
Score = 30.7 bits (66), Expect = 3.6
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Frame = +3
Query: 99 SSDRPEQIKPKDNLHTDGDF---YDRPKTQRQHGEIPN-------QIRPKDNLREESDFD 248
S DR E+ + D D + YDR +T +H + R +DN R S +
Sbjct: 246 SLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPS-LE 304
Query: 249 HPRNQKWHPGDRRSPIKPKDNLHTEGELDSWSSTKNMPEGAR-TQMKPDSSKRT-PEKS 419
+++ RSP + K E E D WS ++ + T +K + T P+K+
Sbjct: 305 RSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKN 363
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2480
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 282 RRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHP 434
RRS + L + + SW K P ++ P S+ R PE+ GP +P
Sbjct: 234 RRSEAETLSGLTSRNKNGSWGP-KTKPSVIHSRSPPGSTPRLPERPGPSNP 283
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2464
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 282 RRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHP 434
RRS + L + + SW K P ++ P S+ R PE+ GP +P
Sbjct: 234 RRSEAETLSGLTSRNKNGSWGP-KTKPSVIHSRSPPGSTPRLPERPGPSNP 283
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2448
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 282 RRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHP 434
RRS + L + + SW K P ++ P S+ R PE+ GP +P
Sbjct: 234 RRSEAETLSGLTSRNKNGSWGP-KTKPSVIHSRSPPGSTPRLPERPGPSNP 283
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2432
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 282 RRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHP 434
RRS + L + + SW K P ++ P S+ R PE+ GP +P
Sbjct: 234 RRSEAETLSGLTSRNKNGSWGP-KTKPSVIHSRSPPGSTPRLPERPGPSNP 283
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2416
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 282 RRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHP 434
RRS + L + + SW K P ++ P S+ R PE+ GP +P
Sbjct: 234 RRSEAETLSGLTSRNKNGSWGP-KTKPSVIHSRSPPGSTPRLPERPGPSNP 283
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2400
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 282 RRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHP 434
RRS + L + + SW K P ++ P S+ R PE+ GP +P
Sbjct: 234 RRSEAETLSGLTSRNKNGSWGP-KTKPSVIHSRSPPGSTPRLPERPGPSNP 283
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa
1-like protein 1 protein.
Length = 2464
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 282 RRSPIKPKDNLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPIHP 434
RRS + L + + SW K P ++ P S+ R PE+ GP +P
Sbjct: 234 RRSEAETLSGLTSRNKNGSWGP-KTKPSVIHSRSPPGSTPRLPERPGPSNP 283
>AK124773-1|BAC85942.1| 841|Homo sapiens protein ( Homo sapiens
cDNA FLJ42783 fis, clone BRAWH3005981. ).
Length = 841
Score = 29.5 bits (63), Expect = 8.2
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 252 PRNQKWHPGDRRSPIKPKD-NLHTEGELDSWSSTKNMPEGARTQMKPDSSKRTPEKSGPI 428
P +Q+ P RS + P+ + H+ G +DS P GA + DSS R P
Sbjct: 64 PASQEHTPHPCRSAMAPRSLSCHSVGSMDSVGGG---PGGASGGLTEDSSTRRPPAKPRR 120
Query: 429 HPKHNL 446
HP L
Sbjct: 121 HPSTKL 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,743,125
Number of Sequences: 237096
Number of extensions: 1811084
Number of successful extensions: 5225
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5214
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -