Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_A18
         (495 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12779-1|CAA73317.1|  483|Homo sapiens enamelysin protein.             29   8.9  
AY673603-1|AAT70722.1|  483|Homo sapiens matrix metalloproteinas...    29   8.9  

>Y12779-1|CAA73317.1|  483|Homo sapiens enamelysin protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -3

Query: 382 RSLFFVNDKLRFTYAILSASSDKSYVFNLARTYHGLL*HLRITYYIDSIIFFFILKKSHR 203
           ++LFFV D+  ++Y       +K Y  N    + G+   +     ++  I+FF   K+++
Sbjct: 405 KTLFFVGDEY-YSYDERKRKMEKDYPKNTEEEFSGVNGQIDAAVELNGYIYFFSGPKTYK 463

Query: 202 Y*T 194
           Y T
Sbjct: 464 YDT 466


>AY673603-1|AAT70722.1|  483|Homo sapiens matrix metalloproteinase
           20 (enamelysin) protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -3

Query: 382 RSLFFVNDKLRFTYAILSASSDKSYVFNLARTYHGLL*HLRITYYIDSIIFFFILKKSHR 203
           ++LFFV D+  ++Y       +K Y  N    + G+   +     ++  I+FF   K+++
Sbjct: 405 KTLFFVGDEY-YSYDERKRKMEKDYPKNTEEEFSGVNGQIDAAVELNGYIYFFSGPKTYK 463

Query: 202 Y*T 194
           Y T
Sbjct: 464 YDT 466


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,388,893
Number of Sequences: 237096
Number of extensions: 1160451
Number of successful extensions: 1462
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)