Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_A15
(313 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10386-1|AAA61155.1| 693|Homo sapiens transglutaminase E3 protein. 29 3.8
EF102483-1|ABK41960.1| 693|Homo sapiens transglutaminase 3 (E p... 29 3.8
BC109076-1|AAI09077.1| 693|Homo sapiens transglutaminase 3 (E p... 29 3.8
BC109075-1|AAI09076.1| 693|Homo sapiens transglutaminase 3 (E p... 29 3.8
AL031678-3|CAB37633.1| 693|Homo sapiens transglutaminase 3 (E p... 29 3.8
AF089726-1|AAG16773.1| 1090|Homo sapiens sodium bicarbonate cotr... 27 8.8
AF053755-1|AAF21720.1| 1000|Homo sapiens bicarbonate transporter... 27 8.8
AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate cotr... 27 8.8
AB012130-1|BAA25898.1| 1018|Homo sapiens sodium bicarbonate cotr... 27 8.8
>L10386-1|AAA61155.1| 693|Homo sapiens transglutaminase E3 protein.
Length = 693
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +1
Query: 112 TRGRRMKMKGNWSYSLVLVIEKDASGEN-KLNV--KFEPGELTEPDR-TFEEARGKIKKY 279
T G++ K N S+++ I A G N +++V K++ E ++ +R F++A GK+K
Sbjct: 405 TTGKQWKNSVN-SHTIGRYISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPN 463
Query: 280 TPFLA 294
TPF A
Sbjct: 464 TPFAA 468
>EF102483-1|ABK41960.1| 693|Homo sapiens transglutaminase 3 (E
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 693
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +1
Query: 112 TRGRRMKMKGNWSYSLVLVIEKDASGEN-KLNV--KFEPGELTEPDR-TFEEARGKIKKY 279
T G++ K N S+++ I A G N +++V K++ E ++ +R F++A GK+K
Sbjct: 405 TTGKQWKNSVN-SHTIGRYISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPN 463
Query: 280 TPFLA 294
TPF A
Sbjct: 464 TPFAA 468
>BC109076-1|AAI09077.1| 693|Homo sapiens transglutaminase 3 (E
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 693
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +1
Query: 112 TRGRRMKMKGNWSYSLVLVIEKDASGEN-KLNV--KFEPGELTEPDR-TFEEARGKIKKY 279
T G++ K N S+++ I A G N +++V K++ E ++ +R F++A GK+K
Sbjct: 405 TTGKQWKNSVN-SHTIGRYISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPN 463
Query: 280 TPFLA 294
TPF A
Sbjct: 464 TPFAA 468
>BC109075-1|AAI09076.1| 693|Homo sapiens transglutaminase 3 (E
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 693
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +1
Query: 112 TRGRRMKMKGNWSYSLVLVIEKDASGEN-KLNV--KFEPGELTEPDR-TFEEARGKIKKY 279
T G++ K N S+++ I A G N +++V K++ E ++ +R F++A GK+K
Sbjct: 405 TTGKQWKNSVN-SHTIGRYISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPN 463
Query: 280 TPFLA 294
TPF A
Sbjct: 464 TPFAA 468
>AL031678-3|CAB37633.1| 693|Homo sapiens transglutaminase 3 (E
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 693
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +1
Query: 112 TRGRRMKMKGNWSYSLVLVIEKDASGEN-KLNV--KFEPGELTEPDR-TFEEARGKIKKY 279
T G++ K N S+++ I A G N +++V K++ E ++ +R F++A GK+K
Sbjct: 405 TTGKQWKNSVN-SHTIGRYISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPN 463
Query: 280 TPFLA 294
TPF A
Sbjct: 464 TPFAA 468
>AF089726-1|AAG16773.1| 1090|Homo sapiens sodium bicarbonate
cotransporter 2b protein.
Length = 1090
Score = 27.5 bits (58), Expect = 8.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 285 WCILLYFTTSFFESSIR 235
WC++L+FTT F S ++
Sbjct: 703 WCVILFFTTFFLSSFLK 719
>AF053755-1|AAF21720.1| 1000|Homo sapiens bicarbonate transporter
protein.
Length = 1000
Score = 27.5 bits (58), Expect = 8.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 285 WCILLYFTTSFFESSIR 235
WC++L+FTT F S ++
Sbjct: 613 WCVILFFTTFFLSSFLK 629
>AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate
cotransporter 3 protein.
Length = 1214
Score = 27.5 bits (58), Expect = 8.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 285 WCILLYFTTSFFESSIR 235
WC++L+FTT F S ++
Sbjct: 827 WCVILFFTTFFLSSFLK 843
>AB012130-1|BAA25898.1| 1018|Homo sapiens sodium bicarbonate
cotransporter2 protein.
Length = 1018
Score = 27.5 bits (58), Expect = 8.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 285 WCILLYFTTSFFESSIR 235
WC++L+FTT F S ++
Sbjct: 613 WCVILFFTTFFLSSFLK 629
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,319,866
Number of Sequences: 237096
Number of extensions: 904434
Number of successful extensions: 5286
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5286
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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