Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_A14
         (415 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-658|AAF45971.2|  714|Drosophila melanogaster CG15473-PA...    29   3.2  
AY089261-1|AAL89999.1|  518|Drosophila melanogaster AT04747p pro...    27   7.4  
AE014298-1938|AAF48300.2|  518|Drosophila melanogaster CG15760-P...    27   7.4  

>AE014298-658|AAF45971.2|  714|Drosophila melanogaster CG15473-PA
           protein.
          Length = 714

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 2   QRSWRRTLLSTTYVFLVLSECIGVSDTQTAQIYLFIKFQDT 124
           +R W RTL   TYV L     +G +    +Q++ +  F  T
Sbjct: 62  ERPWERTLKHVTYVTLFTDAAMGAAAGNLSQLHEYHDFLQT 102


>AY089261-1|AAL89999.1|  518|Drosophila melanogaster AT04747p
           protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 410 SNSHCLNNGFRRHWYKRAVVLLILL 336
           S+SH LN  F  HW+   VV+ I+L
Sbjct: 63  SDSHVLNLFFATHWFFWCVVVAIIL 87


>AE014298-1938|AAF48300.2|  518|Drosophila melanogaster CG15760-PA
           protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 410 SNSHCLNNGFRRHWYKRAVVLLILL 336
           S+SH LN  F  HW+   VV+ I+L
Sbjct: 63  SDSHVLNLFFATHWFFWCVVVAIIL 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,754,748
Number of Sequences: 53049
Number of extensions: 282562
Number of successful extensions: 477
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)