Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_A11
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 87 7e-18
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 31 0.28
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 3.5
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 28 3.5
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 3.5
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 28 3.5
Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical pr... 27 4.6
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 27 4.6
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 27 4.6
U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical pr... 27 4.6
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 27 4.6
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 27 4.6
U41007-4|AAA82266.1| 659|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z46828-3|CAA86858.2| 363|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 27 6.1
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 27 6.1
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 27 6.1
U00049-2|AAC47052.2| 327|Caenorhabditis elegans Serpentine rece... 27 6.1
AF024495-1|AAB70338.3| 399|Caenorhabditis elegans Nuclear hormo... 27 6.1
AC024757-1|AAF59450.3| 490|Caenorhabditis elegans Hypothetical ... 27 6.1
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/97 (39%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +2
Query: 155 ASHEIPEKLRDIPTSANPKFFHMVEYFFHRACQVIEDKLVEDLKSR-MPVEEKKKKVAGI 331
A ++ ++ + + NP F+ MV+++F++ +VI KL E+LKS + ++KK V+GI
Sbjct: 24 AHSQVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNLVSGI 83
Query: 332 LKLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTH 442
L ++P + +L I FP+RRD+G++E+I +RAQHS H
Sbjct: 84 LGAIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEH 120
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 31.5 bits (68), Expect = 0.28
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +2
Query: 149 TYASHEIPEKLRDIPTSANPKFFHMVEYFFHRACQVIEDKLVEDLKSRM--PVEEKKKKV 322
T++ + + AN FF + E F+R V DLKSR V++ +++
Sbjct: 465 TFSCEDKSRPITSEEKKANQMFFLLDETAFNR--NATRYMSVGDLKSRYGDKVDDVAEEI 522
Query: 323 AGILKLMEPCDHILEIQFPLRRDSGDY 403
A IL++ME H+ +R +GD+
Sbjct: 523 AVILRIMEKLWHVFMPDSYIRTMTGDF 549
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 293 MPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 415
+P+E +++ + K E CDH+++ Q L R S E I+
Sbjct: 443 LPIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 293 MPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 415
+P+E +++ + K E CDH+++ Q L R S E I+
Sbjct: 443 LPIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 293 MPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 415
+P+E +++ + K E CDH+++ Q L R S E I+
Sbjct: 443 LPIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 164 EIPEKLRDIPTSANPKFFHM--VEYFFHRACQVIEDKLVEDLKSRMPVEEKKKKVAGILK 337
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1010 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1069
Query: 338 LME 346
+ +
Sbjct: 1070 IAQ 1072
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 164 EIPEKLRDIPTSANPKFFHM--VEYFFHRACQVIEDKLVEDLKSRMPVEEKKKKVAGILK 337
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1010 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1069
Query: 338 LME 346
+ +
Sbjct: 1070 IAQ 1072
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 251 QVIEDKLVEDLKSRMPVEEKKKKVAGILKLMEPCDHIL 364
+VI DK+++ RM ++ K ++ I +LM+ +H++
Sbjct: 426 EVISDKMLKACAERMKDKKPKVRIQAIKRLMDLYNHVM 463
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 164 EIPEKLRDIPTSANPKFFHM--VEYFFHRACQVIEDKLVEDLKSRMPVEEKKKKVAGILK 337
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1013 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1072
Query: 338 LME 346
+ +
Sbjct: 1073 IAQ 1075
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 251 QVIEDKLVEDLKSRMPVEEKKKKVAGILKLMEPCDHIL 364
+VI DK+++ RM ++ K ++ I +LM+ +H++
Sbjct: 426 EVISDKMLKACAERMKDKKPKVRIQAIKRLMDLYNHVM 463
>Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical
protein F46C5.7 protein.
Length = 199
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 344 PSVLEYQLLSSFFLQQAFWISNLLPIY 264
P++L LS+ F+ W+S L+PI+
Sbjct: 86 PALLHLHTLSAAFMSMVCWLSVLIPIF 112
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 VIEDKLVEDLKSRMPVE-EKKKKVAGILKLMEPCDHILEIQF 376
++ DK++ K+ V+ +KK KV + +E DHIL +++
Sbjct: 897 ILHDKMILVTKNNHIVQTDKKLKVVNVATELERVDHILPLRY 938
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 VIEDKLVEDLKSRMPVE-EKKKKVAGILKLMEPCDHILEIQF 376
++ DK++ K+ V+ +KK KV + +E DHIL +++
Sbjct: 897 ILHDKMILVTKNNHIVQTDKKLKVVNVATELERVDHILPLRY 938
>U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical
protein F20A1.4 protein.
Length = 580
Score = 27.5 bits (58), Expect = 4.6
Identities = 20/79 (25%), Positives = 30/79 (37%)
Frame = +2
Query: 50 AKTVVPPLKNCVQNEALNTVLRMTPAGLNICCRTYASHEIPEKLRDIPTSANPKFFHMVE 229
AKT++P + CV N N + M + + TY + IP +
Sbjct: 180 AKTIIPSVTLCVLNLLQNICIMMVALSILLIRNTY-NWCIPTVRLSFLRGIQAFVEEKLV 238
Query: 230 YFFHRACQVIEDKLVEDLK 286
YF H CQ+ + L K
Sbjct: 239 YFAHLMCQIGQRLLASPAK 257
>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical protein
R08E3.1b protein.
Length = 1465
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/63 (20%), Positives = 24/63 (38%)
Frame = -3
Query: 304 FNRHSGFQIFYQFIFDYLTCSMEKILNHVEKFRVCTGRYVSKLFRDLMACISTATNIQPS 125
F R SG FY CS + + + T +++ + ++ C T+ +
Sbjct: 924 FTRKSGASCFYSHFTVLDVCSQSTTIGYQAQLTTRTSTLTNRIQQFVLTCFKTSYANNDT 983
Query: 124 RCH 116
CH
Sbjct: 984 SCH 986
>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical protein
R08E3.1a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/63 (20%), Positives = 24/63 (38%)
Frame = -3
Query: 304 FNRHSGFQIFYQFIFDYLTCSMEKILNHVEKFRVCTGRYVSKLFRDLMACISTATNIQPS 125
F R SG FY CS + + + T +++ + ++ C T+ +
Sbjct: 924 FTRKSGASCFYSHFTVLDVCSQSTTIGYQAQLTTRTSTLTNRIQQFVLTCFKTSYANNDT 983
Query: 124 RCH 116
CH
Sbjct: 984 SCH 986
>U41007-4|AAA82266.1| 659|Caenorhabditis elegans Hypothetical
protein C33H5.9 protein.
Length = 659
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 158 SHEIPEKLRDIPTSANPKFFHMVEYFFHRACQVIEDKLVEDLKSRMPVEEKKKKVAGIL 334
S ++ KL I N F V+ + +V+ED L+E+ E+K +VA IL
Sbjct: 117 SADLVHKLYSISQELNKDKFANVQARIGQRYKVVEDLLIEEFVRSQRDEKKMAEVAKIL 175
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 65 PPLKNCVQNEALNTVLRMTPAGLNICCRTYASHEIPEKLRDIPTSANPK 211
PP K V+ A+ +T A ++ RT S E L + PTSA+P+
Sbjct: 622 PPTKTNVEKPAVRLGRMLTTAFGSMSYRTRKSVENKTDLLNQPTSASPR 670
>Z46828-3|CAA86858.2| 363|Caenorhabditis elegans Hypothetical
protein R03D7.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 316 LLFFFNRHSGFQIFYQFIFDYLTCSMEKILNHVEKFRVCTGR-YVSKLF 173
LL+F++R++ ++ + DYL + ++ + KF V + Y +LF
Sbjct: 83 LLYFYSRNANDKVINCLVLDYLPQDLARLRDQGVKFDVLDAKLYTFQLF 131
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 65 PPLKNCVQNEALNTVLRMTPAGLNICCRTYASHEIPEKLRDIPTSANPK 211
PP K V+ A+ +T A ++ RT S E L + PTSA+P+
Sbjct: 622 PPTKTNVEKPAVRLGRMLTTAFGSMSYRTRKSVENKTDLLNQPTSASPR 670
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 65 PPLKNCVQNEALNTVLRMTPAGLNICCRTYASHEIPEKLRDIPTSANPK 211
PP K V+ A+ +T A ++ RT S E L + PTSA+P+
Sbjct: 622 PPTKTNVEKPAVRLGRMLTTAFGSMSYRTRKSVENKTDLLNQPTSASPR 670
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 65 PPLKNCVQNEALNTVLRMTPAGLNICCRTYASHEIPEKLRDIPTSANPK 211
PP K V+ A+ +T A ++ RT S E L + PTSA+P+
Sbjct: 622 PPTKTNVEKPAVRLGRMLTTAFGSMSYRTRKSVENKTDLLNQPTSASPR 670
>U00049-2|AAC47052.2| 327|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 2 protein.
Length = 327
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = -3
Query: 361 YVITWFHQ--F*NTSYFLLFFFNRHSGF-----QIFYQFIFDYLTCSMEKILNHVEKFRV 203
Y++ W H+ + S+++LF + + F IF+ +F Y+T E + VE + +
Sbjct: 53 YILLWKHRNLYLKQSFYILFIMSCIACFTLVVQDIFFARVFQYMTQFCEPMSEFVENYPI 112
Query: 202 CTGRY 188
Y
Sbjct: 113 FPAIY 117
>AF024495-1|AAB70338.3| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 125 protein.
Length = 399
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 186 TYLPVQTLNF-STWLSIFSIEHVR 254
T + ++ + F STWLS + +EHVR
Sbjct: 247 TLVDIENVEFDSTWLSDYPVEHVR 270
>AC024757-1|AAF59450.3| 490|Caenorhabditis elegans Hypothetical
protein Y37E11AL.5 protein.
Length = 490
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 358 VITWFHQF*NTSYFLLFFFNRHSGFQIFYQFIFDY 254
V + F F S LLFFF HS IF+ +F +
Sbjct: 342 VSSLFMVFCFCSALLLFFFREHSPMAIFFFCLFQF 376
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 263 DKLVEDLKSRMPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 415
+KL E L K +++ + L +P D I FP R S YEM++
Sbjct: 137 EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 187
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 263 DKLVEDLKSRMPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 415
+KL E L K +++ + L +P D I FP R S YEM++
Sbjct: 137 EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 187
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 263 DKLVEDLKSRMPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 415
+KL E L K +++ + L +P D I FP R S YEM++
Sbjct: 68 EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,867,653
Number of Sequences: 27780
Number of extensions: 239709
Number of successful extensions: 631
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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