Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_A10
(546 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 141 5e-35
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 48 7e-07
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 39 4e-04
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 29 0.59
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 0.78
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 27 1.4
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 27 2.4
SPBC15D4.12c |mug98||sequence orphan|Schizosaccharomyces pombe|c... 26 3.2
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 26 4.2
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 4.2
SPBC23G7.10c |||NADH-dependent flavin oxidoreductase |Schizosacc... 25 7.3
SPBC887.18c |||transcription adaptor protein |Schizosaccharomyce... 25 7.3
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 25 7.3
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 25 9.6
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 25 9.6
SPAC2F3.13c |||queuine tRNA-ribosyltransferase |Schizosaccharomy... 25 9.6
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 141 bits (342), Expect = 5e-35
Identities = 74/101 (73%), Positives = 83/101 (82%), Gaps = 3/101 (2%)
Frame = +3
Query: 249 QFED--NLPPILNALEVQ-NRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSGS 419
QFED +LP ILNALEV+ + RLVLEVAQH+GENTVRTIAMDGTEGLVRG V D+GS
Sbjct: 68 QFEDADSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGS 127
Query: 420 PIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAP 542
PI IPVG TLGRI+NVIGEP+DERGPI K + IHA+AP
Sbjct: 128 PISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAP 168
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 48.4 bits (110), Expect = 7e-07
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 324 VAQHLGENTVRTIAMDGTEGLVR-GQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGP 500
+A +L +TV + G + LVR G+ V + + +PVG LGR+++ +G PID +GP
Sbjct: 90 MALNLEADTVGCVLF-GNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGP 148
Query: 501 IPTDKTAAIHAEAP 542
I T + + +AP
Sbjct: 149 IKTTERRRVQLKAP 162
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 39.1 bits (87), Expect = 4e-04
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 315 VLEVAQHLGENTVRTIAMDGTEGL-VRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDE 491
VLEVA H V +GT G+ VR + +G +RIPV + LGR+ N G PID
Sbjct: 63 VLEVAGHKAIVQV----FEGTSGVDVRKTTIDFTGHSMRIPVSEDMLGRVFNGSGLPID- 117
Query: 492 RGP 500
+GP
Sbjct: 118 KGP 120
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 28.7 bits (61), Expect = 0.59
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -2
Query: 215 LTLGFACSFCRIVPLVDGRHSCNLATFCKGFFRNCFSG*EAASNPTYCTQHFSIIS 48
L L C + + + L+ G H T GF+ C +A+ YC + F +S
Sbjct: 95 LLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWRYCCEIFDYLS 150
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 28.3 bits (60), Expect = 0.78
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 499 GPRSSIGSPMTLMIRPRVSA-PTGIRMGEPESCTGCPRTKPSVPSM 365
G R++ G+P + R+++ PT I PES K S PS+
Sbjct: 154 GKRTAPGNPWAIRSAERLASNPTSIGTSSPESIDNNSNNKKSAPSL 199
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 283 LSRYKIAPLVSYWRSRSTWVKIRSEPLPWTVP 378
L+RY I+P +S S ++I S +PW P
Sbjct: 219 LNRYDISPAAFILKSGSPSLQIHSVEIPWVEP 250
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 375 TEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDE 491
T GL G PV +G P+ + +G I + I P+ +
Sbjct: 77 TSGLTVGDPVQRTGKPLSVELGPGLAETIYDGIQRPLKQ 115
>SPBC15D4.12c |mug98||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 113
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 356 NHCHGR-YRGFSARTTRT*LWFTHPYPRRSRDSGPYHQCH 472
NH + YR F+ R LW+ +PY + +G YH +
Sbjct: 75 NHSYSAFYRPFTKRENG--LWYANPYYMQHGPNGNYHHVY 112
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 151 AILPHSVKVFSATVLAAKKPLPTRLTAPNIF 59
A++ K+FSA V++A +P L A N+F
Sbjct: 1070 ALISGFFKIFSAAVVSATLLIPFALWAKNVF 1100
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 505 GIGPRSSIGSPMTLMIRPRVSAPTGIRMGEPESCTGCPRTKPSVPSMA 362
G G ++S+GS I R+ PT MG S G T P+ A
Sbjct: 487 GHGSQTSLGSIKRKSIMERMGRPTSPFMGSSFSNMGSRSTSPTKEGFA 534
>SPBC23G7.10c |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 300 RSPRLVLEVAQHLGENTVRTIAMD 371
R+P LVL+ A LGEN + D
Sbjct: 362 RNPSLVLDSANQLGENVAWPVQYD 385
>SPBC887.18c |||transcription adaptor protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 339
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 78 LLHPTFFNNQLVLCAEYEEYKLSS 7
LLH ++ +++ +CAE Y L+S
Sbjct: 297 LLHDSYTEDEISICAESPSYMLAS 320
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 351 VRTIAMDGTEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPID 488
++ + DG G+ + + D+ P P E LGR+I V PID
Sbjct: 1 MKAVIADGQNGV---EVISDAPKPT--PEKGEFLGRVIRVAFNPID 41
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 284 SRGTKSLPSSRIGGRAALG*KYGPNHCHGRYRGFSAR 394
S+ SL +IG R LG Y G +RGF R
Sbjct: 271 SKSAASLVKPKIGIRHVLGGLYKSEGLLGLFRGFGPR 307
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -2
Query: 179 VPLVDGRHSCNLATFCKGFFRNCFSG*EAASNPTYCTQHFSIISWSYVRNTK 24
+ L+ G H T GF+ C + A+ YC Q F ++ + V + K
Sbjct: 105 ITLLRGNHESRQITQVYGFYDECQTKYGNANVWKYCCQVFDFLTLAAVIDNK 156
>SPAC2F3.13c |||queuine tRNA-ribosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 124 KPLQNVARLQLCLPSTRGTMRQKLQAKPKVRWLQLSV 234
+PLQ+ + C R +R LQA+ V W+ L +
Sbjct: 301 EPLQSGCVCKTCRRYKRAYVRHLLQARELVAWILLQL 337
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,395,114
Number of Sequences: 5004
Number of extensions: 50755
Number of successful extensions: 147
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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