Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_A08
         (406 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    83   1e-16
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    83   1e-16
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...    46   1e-05
AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-P...    33   0.14 
AE014298-2531|ABI30988.1| 1520|Drosophila melanogaster CG5055-PB...    27   7.2  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 40/95 (42%), Positives = 57/95 (60%)
 Frame = +2

Query: 95  NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEQNGGTRTVLLK 274
           N  L  G+LR+SK++MY ++A+Y+                  VK+IGG +NGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 275 SRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPG 379
             K+ YPT+  +++R    +FS+H R TR NLTPG
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPG 117


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 40/95 (42%), Positives = 57/95 (60%)
 Frame = +2

Query: 95  NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEQNGGTRTVLLK 274
           N  L  G+LR+SK++MY ++A+Y+                  VK+IGG +NGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 275 SRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPG 379
             K+ YPT+  +++R    +FS+H R TR NLTPG
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPG 117


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 31/95 (32%), Positives = 50/95 (52%)
 Frame = +2

Query: 95  NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEQNGGTRTVLLK 274
           N  L  G+LR+SK++MY ++A+Y+               + VV++           V +K
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIK 63

Query: 275 SRKSFYPTQDKIRRRSHGKSFSKHVRRTRPNLTPG 379
             K+ YPT+  +++R    +FS+H R TR NLTPG
Sbjct: 64  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPG 98


>AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-PB,
            isoform B protein.
          Length = 1346

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 63   VSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYI-SLSVRRTRKLKSPRNQPSWLSK*AV 239
            +S S   AN+ I  S T  S SP+AG     L I SL +R+     + +  P  +SK  V
Sbjct: 1104 ISESPNAANKVIEASPTAASPSPRAGHEASHLRIRSLRIRKVASTSTSQTTPKPVSKRKV 1163

Query: 240  NRMEALVQSC*KAGNHSTPLRTRS 311
              +E  +++  K     +P  + S
Sbjct: 1164 VHLETPLRNGRKRVLRRSPSNSNS 1187


>AE014298-2531|ABI30988.1| 1520|Drosophila melanogaster CG5055-PB,
           isoform B protein.
          Length = 1520

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +1

Query: 247 WRHSYSPAEKQEIILPHSGQDQASFS 324
           WRH+Y  A KQE I PH GQ   S+S
Sbjct: 21  WRHTYKVAAKQEGI-PH-GQLHKSYS 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,543,696
Number of Sequences: 53049
Number of extensions: 353379
Number of successful extensions: 719
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)