Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_A04
(465 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 203 4e-53
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical ... 29 1.6
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 2.9
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 27 5.0
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 27 5.0
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 5.0
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 203 bits (496), Expect = 4e-53
Identities = 93/133 (69%), Positives = 106/133 (79%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDNDKYNTPKYRLIVRLSNKDV 239
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQD +KYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 419
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY TG DS Y
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 420 GATEVTGDEYNVE 458
G E+TG++YNVE
Sbjct: 121 GHEELTGEDYNVE 133
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 268 RVITLSVL----PTLMNSHAMVSRWV*LTMLLPTALVCC 372
RV+ ++L P+L N+ A VSRW + LP + CC
Sbjct: 77 RVVVQNILHGLSPSLSNALASVSRWKLVRAALPHVIQCC 115
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 268 RVITLSVL----PTLMNSHAMVSRWV*LTMLLPTALVCC 372
RV+ ++L P+L N+ A VSRW + LP + CC
Sbjct: 77 RVVVQNILHGLSPSLSNALASVSRWKLVRAALPHVIQCC 115
>AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical
protein Y67H2A.2a protein.
Length = 553
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 39 ISGIF*KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 152
I IF K+G V+ K +Q +R+Q+KF RE +T Y+
Sbjct: 405 IYSIFYKLGKVEE-KERQIIERFQIKF-HEREDRTRYF 440
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 189 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 308
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -1
Query: 306 VHESRQHRQCDHPQCVSMQLDR*HLYWITVQSVGTLECCICHYPGQRGV-CEHSSQF 139
VH S +H QC HP LD + +++S E C+ G V C+H F
Sbjct: 1084 VHSSIEHLQCPHPYL--NPLDHPQMCITSLKSCSDSETCLKTTSGGNFVCCQHPPSF 1138
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 126 RREGKTDYYA-RKRLVVQDNDKYNTPKYRLIVRLSNKDVT 242
R G D+YA R L+V D D + + ++I+++ D+T
Sbjct: 276 RHAGMLDWYAGRYNLIVYDRDVHPQDRSKIILQIKPPDLT 315
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 126 RREGKTDYYA-RKRLVVQDNDKYNTPKYRLIVRLSNKDVT 242
R G D+YA R L+V D D + + ++I+++ D+T
Sbjct: 360 RHAGMLDWYAGRYNLIVYDRDVHPQDRSKIILQIKPPDLT 399
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 99 KRYQVKFKRRREGKTDYYARKRLVVQDNDKYNTPKYRLIVRLS 227
+ Y +F R + Y + L+ QDN ++P+YR + R S
Sbjct: 1603 QNYSHRFGYSRNRGSRYDETEHLLAQDNRSPSSPRYRSMARAS 1645
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,957,640
Number of Sequences: 27780
Number of extensions: 222696
Number of successful extensions: 554
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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