Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P24
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41543-2|AAO21426.1|  359|Caenorhabditis elegans Hypothetical pr...   132   1e-31
U41543-1|AAB37022.2|  396|Caenorhabditis elegans Hypothetical pr...   132   1e-31
AF043703-6|AAK21503.1|  399|Caenorhabditis elegans Hypothetical ...   132   1e-31
AF003148-10|AAB54206.2|  427|Caenorhabditis elegans Hypothetical...   131   3e-31
Z83109-2|CAB05517.1|  372|Caenorhabditis elegans Hypothetical pr...   129   2e-30
Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical pr...   126   1e-29
U80451-10|AAB37844.1|  106|Caenorhabditis elegans Hypothetical p...    77   1e-14
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82072-2|CAB04921.1|  329|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81029-8|CAB02702.1|  329|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z67738-4|CAJ43444.1|  279|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z67738-3|CAA91544.2|  332|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U41534-11|AAM22028.1|  686|Caenorhabditis elegans Hypothetical p...    27   8.2  
U41534-10|AAK68177.1|  687|Caenorhabditis elegans Hypothetical p...    27   8.2  

>U41543-2|AAO21426.1|  359|Caenorhabditis elegans Hypothetical
           protein F46H5.3b protein.
          Length = 359

 Score =  132 bits (320), Expect = 1e-31
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = -1

Query: 560 EKRIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEIASKYHLQVRGTRG 381
           EK+ PFS  DRLG+LTFCP+NLGTTVRASVHI            + I     LQ+RG  G
Sbjct: 258 EKQAPFSRDDRLGWLTFCPSNLGTTVRASVHIRLPKISAKPDF-KSICDGLKLQIRGIHG 316

Query: 380 EHTEAEGGVYDISNKRRMGLTEYEAVKEMYDGIAELIKIEKS 255
           EH+E+EGGVYDISNK R+GLTE+EAVK+MYDGIA LI +EK+
Sbjct: 317 EHSESEGGVYDISNKARLGLTEFEAVKQMYDGIAHLIALEKA 358


>U41543-1|AAB37022.2|  396|Caenorhabditis elegans Hypothetical
           protein F46H5.3a protein.
          Length = 396

 Score =  132 bits (320), Expect = 1e-31
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = -1

Query: 560 EKRIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEIASKYHLQVRGTRG 381
           EK+ PFS  DRLG+LTFCP+NLGTTVRASVHI            + I     LQ+RG  G
Sbjct: 295 EKQAPFSRDDRLGWLTFCPSNLGTTVRASVHIRLPKISAKPDF-KSICDGLKLQIRGIHG 353

Query: 380 EHTEAEGGVYDISNKRRMGLTEYEAVKEMYDGIAELIKIEKS 255
           EH+E+EGGVYDISNK R+GLTE+EAVK+MYDGIA LI +EK+
Sbjct: 354 EHSESEGGVYDISNKARLGLTEFEAVKQMYDGIAHLIALEKA 395


>AF043703-6|AAK21503.1|  399|Caenorhabditis elegans Hypothetical
           protein W10C8.5 protein.
          Length = 399

 Score =  132 bits (320), Expect = 1e-31
 Identities = 62/101 (61%), Positives = 79/101 (78%)
 Frame = -1

Query: 560 EKRIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEIASKYHLQVRGTRG 381
           EK++PFS  DRLG+LTFCPTNLG+TVRASVHI           +E I  K +LQVRG  G
Sbjct: 297 EKQVPFSRDDRLGWLTFCPTNLGSTVRASVHIALPKLAARKDFIE-ICEKLNLQVRGIHG 355

Query: 380 EHTEAEGGVYDISNKRRMGLTEYEAVKEMYDGIAELIKIEK 258
           EH+E+ GGVYDISNK R+GL+EY+AVK+MYDG+ +LI++E+
Sbjct: 356 EHSESVGGVYDISNKARLGLSEYQAVKQMYDGVKKLIEMEE 396


>AF003148-10|AAB54206.2|  427|Caenorhabditis elegans Hypothetical
           protein F32B5.1 protein.
          Length = 427

 Score =  131 bits (317), Expect = 3e-31
 Identities = 61/101 (60%), Positives = 79/101 (78%)
 Frame = -1

Query: 560 EKRIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEIASKYHLQVRGTRG 381
           EK++PFS  DRLG+LTFCPTNLG+TVRASVHI           +E I  K +LQVRG  G
Sbjct: 325 EKQVPFSRDDRLGWLTFCPTNLGSTVRASVHIALPKLAARKDFIE-ICEKLNLQVRGIHG 383

Query: 380 EHTEAEGGVYDISNKRRMGLTEYEAVKEMYDGIAELIKIEK 258
           EH+++ GGVYDISNK R+GL+EY+AVK+MYDG+ +LI++E+
Sbjct: 384 EHSDSVGGVYDISNKARLGLSEYQAVKQMYDGVKKLIEMEE 424


>Z83109-2|CAB05517.1|  372|Caenorhabditis elegans Hypothetical
           protein F44G3.2 protein.
          Length = 372

 Score =  129 bits (311), Expect = 2e-30
 Identities = 60/101 (59%), Positives = 77/101 (76%)
 Frame = -1

Query: 560 EKRIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEIASKYHLQVRGTRG 381
           EK++ FS  DRLG+LTFCPTNLG+TVRASVHI            ++I  K  LQ+RG  G
Sbjct: 270 EKQVQFSRDDRLGWLTFCPTNLGSTVRASVHIALPKLSAREDF-KQICDKLDLQLRGIHG 328

Query: 380 EHTEAEGGVYDISNKRRMGLTEYEAVKEMYDGIAELIKIEK 258
           EH+E+EGGVYDISN+ R+GL+EYEAVK+MYDG+  LI++E+
Sbjct: 329 EHSESEGGVYDISNRARLGLSEYEAVKKMYDGVKNLIEMEE 369


>Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical
           protein ZC434.8 protein.
          Length = 360

 Score =  126 bits (304), Expect = 1e-29
 Identities = 57/100 (57%), Positives = 77/100 (77%)
 Frame = -1

Query: 554 RIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEIASKYHLQVRGTRGEH 375
           + PF+ H RLG+LTFCPTNLGTTVRASVHI            ++I S   LQ+RG  GEH
Sbjct: 260 KAPFARHPRLGWLTFCPTNLGTTVRASVHIKLPKISAKDDF-KKICSDMKLQIRGIHGEH 318

Query: 374 TEAEGGVYDISNKRRMGLTEYEAVKEMYDGIAELIKIEKS 255
           +E++ G+YDISNK+R+GLTEY+AV++MYDG+ +LI++EK+
Sbjct: 319 SESKEGIYDISNKQRLGLTEYQAVRQMYDGLKKLIELEKA 358


>U80451-10|AAB37844.1|  106|Caenorhabditis elegans Hypothetical
           protein F11G11.13 protein.
          Length = 106

 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 34/76 (44%), Positives = 56/76 (73%)
 Frame = -1

Query: 491 TTVRASVHIXXXXXXXXXXXLEEIASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEY 312
           T++++SVHI            ++I S+  LQ+RG  GE+++ + G+YDISNK+R+GLTEY
Sbjct: 24  TSLKSSVHIKLPKISAKDDF-KKICSEMKLQIRGIHGEYSDLKEGIYDISNKQRLGLTEY 82

Query: 311 EAVKEMYDGIAELIKI 264
           +AV++MYDG+ +LI++
Sbjct: 83  QAVRQMYDGLKKLIEL 98


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical protein
            C27B7.7 protein.
          Length = 1471

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = -3

Query: 180  LDVRIVGPGGPGADALVTALRHTLERPARGLAHRPMYTVFPKHIFYKEMENKD 22
            +++R++GPG P  + ++TA R+ +    +  +  P   +    ++Y E EN D
Sbjct: 960  VEIRVLGPGNPPENIILTAYRNQINVTWQE-STLPNGDIMKYIVYYSENENDD 1011


>Z82072-2|CAB04921.1|  329|Caenorhabditis elegans Hypothetical
           protein W05H12.2 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 548 PFSHHDRLGFLTFCPTNLGTTVRASVH 468
           P  H DRL  LTFC  +  T V   +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220


>Z81029-8|CAB02702.1|  329|Caenorhabditis elegans Hypothetical
           protein W05H12.2 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 548 PFSHHDRLGFLTFCPTNLGTTVRASVH 468
           P  H DRL  LTFC  +  T V   +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220


>Z67738-4|CAJ43444.1|  279|Caenorhabditis elegans Hypothetical
           protein W03G11.1b protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 95  RAGRSSVCRSAVTSASAPGPPG 160
           RA   + C   V SA  PGPPG
Sbjct: 77  RAAEGTCCSCGVGSAGPPGPPG 98


>Z67738-3|CAA91544.2|  332|Caenorhabditis elegans Hypothetical
           protein W03G11.1a protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 95  RAGRSSVCRSAVTSASAPGPPG 160
           RA   + C   V SA  PGPPG
Sbjct: 130 RAAEGTCCSCGVGSAGPPGPPG 151


>U41534-11|AAM22028.1|  686|Caenorhabditis elegans Hypothetical
           protein C16A3.1b protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 122 SAVTSASAPGPPGPTI---LTSNRYSYEKTINNTKK 220
           ++ +SA+ P PP P I    + NR   + T+NN+ K
Sbjct: 37  ASTSSAAPPAPPKPVIPVMFSQNRQPMKPTMNNSTK 72


>U41534-10|AAK68177.1|  687|Caenorhabditis elegans Hypothetical
           protein C16A3.1a protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 122 SAVTSASAPGPPGPTI---LTSNRYSYEKTINNTKK 220
           ++ +SA+ P PP P I    + NR   + T+NN+ K
Sbjct: 38  ASTSSAAPPAPPKPVIPVMFSQNRQPMKPTMNNSTK 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,253,258
Number of Sequences: 27780
Number of extensions: 221834
Number of successful extensions: 854
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)