Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P20
(312 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 47 4e-06
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 43 4e-05
03_01_0249 - 1935355-1935827,1936129-1936330 43 6e-05
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 43 6e-05
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 42 1e-04
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 41 2e-04
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 40 4e-04
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 40 4e-04
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 40 5e-04
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 38 0.002
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 38 0.002
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 37 0.004
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 36 0.005
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 36 0.007
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 36 0.007
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 35 0.012
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 34 0.027
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 32 0.11
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 32 0.11
10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041 29 0.58
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 28 1.3
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 27 2.3
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 27 4.1
11_02_0022 + 7461902-7462951 26 7.2
10_07_0045 + 12328388-12328419,12328504-12328645,12328862-123290... 26 7.2
04_04_0368 + 24741755-24741970,24742415-24742811,24742892-247431... 26 7.2
03_05_0272 + 22604458-22604877 26 7.2
01_01_0370 + 2895685-2895717,2895892-2896944 26 7.2
11_03_0128 - 10437407-10438049,10438097-10438272 25 9.5
01_01_0379 - 2956396-2957409 25 9.5
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 46.8 bits (106), Expect = 4e-06
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 187 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
GEH PEF+K+NP VP LVD I +S AI YL +KY
Sbjct: 49 GEHSDPEFMKVNPMKFVPALVDGDAVIGDSYAIALYLEDKY 89
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 43.2 bits (97), Expect = 4e-05
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 187 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
G+H +PE L NP +P L D L++++SRAI Y+ KY
Sbjct: 39 GDHRRPEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 42.7 bits (96), Expect = 6e-05
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 187 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
GEH P FLKL P VP D +++ESRAI Y+ ++Y
Sbjct: 40 GEHKSPSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQY 80
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +1
Query: 187 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNK 306
GEH P+ L NP VP L D L +WESRAI Y+ K
Sbjct: 39 GEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK 78
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 187 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYG 312
GEH +P + NP VP D L+++ESRAI Y++ K+G
Sbjct: 39 GEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHG 80
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1
Query: 190 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
EH PE LK NP +P D L ++ESRAI Y++ KY
Sbjct: 40 EHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKY 79
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 190 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
EH PE LK NP +P D L ++ESRA+ Y++ KY
Sbjct: 40 EHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKY 79
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 187 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
GE PE ++ NP +P L D L ++ESRAI Y++ KY
Sbjct: 39 GEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKY 79
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 193 HLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
H +P FL LNP +P L D ++ESRAI Y+ KY
Sbjct: 45 HKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKY 83
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 202 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
P++ K+NP VP LVD +I +S AII YL +KY
Sbjct: 44 PDYGKINPIKYVPALVDGDFTISDSLAIILYLEDKY 79
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 181 HHGEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
+ G P++LKL P T DD L++ ESR I+ ++ +KY
Sbjct: 39 YRGTQRMPQYLKLQPLGEALTFEDDNLTLSESRGILRHIAHKY 81
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 190 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNK 306
EH PE NP VP L D L ++ESRAI Y++ K
Sbjct: 39 EHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK 77
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 190 EHLKPEFLKLNPQHTVPTLVD-DGLSIWESRAIITYLVNKY 309
E PEF KLNP VP LVD D + +S AI+ YL + Y
Sbjct: 62 EQSHPEFEKLNPMKYVPALVDGDDTVVVDSFAILLYLEDTY 102
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 35.9 bits (79), Expect = 0.007
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 202 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
P++ K+NP +P LVD L + +S AI YL +KY
Sbjct: 42 PDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY 77
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 35.9 bits (79), Expect = 0.007
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 184 HGEHLKPEFLKLNPQHTVPTLVDD--GLSIWESRAIITYLVNKYG 312
+G +P+ L++ + P +VD G++++ES AII YL +KYG
Sbjct: 178 NGPTFRPKVLEMGGKQQFPYMVDPNTGVAMYESDAIIKYLADKYG 222
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 35.1 bits (77), Expect = 0.012
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 190 EHLKPEFLKLNPQHTVPTLVDDGLSIWE 273
EHL PEF K+NP VP +VD ++E
Sbjct: 41 EHLSPEFKKINPMGQVPAIVDGRFRLFE 68
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 33.9 bits (74), Expect = 0.027
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 187 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
G P++LKL P T D +++ ESR II ++ +KY
Sbjct: 40 GSKRMPQYLKLQPHGEALTFEDGNVTLVESRKIIRHIADKY 80
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 202 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYL 297
PEFLK+NP +P L +++ES AI Y+
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARYV 98
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 202 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVN 303
PEFLK+NP +P L ++ES AI Y+++
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVFESNAIARYVLS 76
Score = 30.7 bits (66), Expect = 0.25
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 202 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVN 303
PE+LK+NP VP L ++ES AI Y+++
Sbjct: 604 PEYLKMNPIGKVPILETPDGPVFESNAIARYVLS 637
>10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041
Length = 279
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 211 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNK 306
L NP H VP L+ +G I ESR I+ Y++++
Sbjct: 67 LASNPVHKKVPVLIHNGKPICESRIILEYIIDE 99
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 187 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
GE+ L +P +P D ++++ESRAI Y++ Y
Sbjct: 38 GENRSRHHLARSPFGKIPAFEDGEVTLFESRAIQRYVLRNY 78
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 42 RVPVSYLKKPNNDD*FVLRSRVGALQSCSTHS*GAKPQSQ-LKVGRSPPRGAPET*ISEV 218
R+P S LKK N D + S GAL++ ST KP S ++ + PP + +V
Sbjct: 324 RLPASALKKDNAPDVAMKESSDGALETQST-----KPSSDGQQINKEPPSVVEDNKQEDV 378
Query: 219 E 221
E
Sbjct: 379 E 379
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 190 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 309
EH PEF+KL T ++ +SRAI YL ++
Sbjct: 41 EHKLPEFIKLRDPTGQVTFKHGDKTLVDSRAICRYLSTQF 80
>11_02_0022 + 7461902-7462951
Length = 349
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 147 KPQSQLKVGRSPPRGAP-ET*ISEVESSAHGPYASR 251
+P+ + VG +PP GAP E + EV+ Y R
Sbjct: 226 RPRRAVSVGVAPPAGAPWECALQEVQRQVKEEYERR 261
>10_07_0045 +
12328388-12328419,12328504-12328645,12328862-12329054,
12329224-12329320,12329404-12329528,12329616-12329734,
12331225-12331298,12331359-12331413,12331450-12331500,
12331611-12331857,12331940-12332036,12332170-12332244,
12334286-12334488,12334757-12334905,12334995-12335168,
12335276-12335401,12335493-12335623,12335743-12335818,
12335898-12336027,12336115-12336193,12336267-12336465,
12336591-12336698,12336769-12337025,12337267-12337282
Length = 984
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = -2
Query: 299 TR*VMMARDSQIERPSSTSVGTVC*GFNFRNSGFRCSPWWRSTNFKLRLRFSALAVSRTA 120
TR +A D Q +R + T + +NF N GF+ + N ++ +F + +TA
Sbjct: 298 TRMEALAYDQQADRFNGTIQSGLV--YNFTNVGFQPTDVPTYANLTMQAKFCMILTPKTA 355
Query: 119 LQ 114
L+
Sbjct: 356 LR 357
>04_04_0368 +
24741755-24741970,24742415-24742811,24742892-24743187,
24743860-24744096
Length = 381
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 215 FRNSGFRCSPWWRSTNFKLRLRFSALAVSRTALQGTDPGT 96
F +S FRC W+ +F LR + + + L D G+
Sbjct: 53 FNSSAFRCLTVWKQEDFVLRYKNTGESQWSFILSAPDKGS 92
>03_05_0272 + 22604458-22604877
Length = 139
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 165 KVGRSPPRGAPET*ISEVESSAHG 236
++G PPRG PE ++ AHG
Sbjct: 42 ELGEVPPRGHPEARGEQLHEQAHG 65
>01_01_0370 + 2895685-2895717,2895892-2896944
Length = 361
Score = 25.8 bits (54), Expect = 7.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 214 KLNPQHTVPTLVDDGLSIW 270
+L P+H +PT +DDG + +
Sbjct: 144 RLAPEHRLPTAIDDGAAFF 162
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 254 SSTSVGTVC*GFNFRNSGFRCSPWWRSTNFKLR 156
SS S+G+ G S CS WWR+T R
Sbjct: 238 SSESLGSWGSGCRSHLSSPTCSSWWRTTALACR 270
>01_01_0379 - 2956396-2957409
Length = 337
Score = 25.4 bits (53), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 214 KLNPQHTVPTLVDDGLSI 267
+L P+H +P +DDG ++
Sbjct: 122 RLGPEHRLPAAIDDGAAV 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,511,087
Number of Sequences: 37544
Number of extensions: 149504
Number of successful extensions: 307
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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