Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P19
(359 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69637-4|CAA93469.1| 539|Caenorhabditis elegans Hypothetical pr... 95 1e-20
Z81134-9|CAB03452.1| 559|Caenorhabditis elegans Hypothetical pr... 87 5e-18
U12762-1|AAA62207.1| 558|Caenorhabditis elegans prolyl 4-hydrox... 87 5e-18
AL031635-12|CAA21045.1| 559|Caenorhabditis elegans Hypothetical... 87 5e-18
AJ277376-1|CAB88202.1| 268|Caenorhabditis elegans prolyl 4-hydr... 87 5e-18
AJ270999-1|CAB71298.1| 559|Caenorhabditis elegans prolyl 4-hydr... 87 5e-18
AJ271000-1|CAB71299.1| 91|Caenorhabditis elegans prolyl 4-hydr... 31 0.24
AJ271001-1|CAB71300.1| 58|Caenorhabditis elegans prolyl 4-hydr... 30 0.56
Z14092-8|CAA78471.1| 208|Caenorhabditis elegans Hypothetical pr... 28 1.7
X13689-1|CAA31979.1| 208|Caenorhabditis elegans protein ( Caeno... 28 1.7
AC024753-7|AAF60459.1| 196|Caenorhabditis elegans Hypothetical ... 27 3.0
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 27 3.9
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 27 3.9
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 27 5.2
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z82070-5|CAB04915.2| 235|Caenorhabditis elegans Hypothetical pr... 26 9.1
>Z69637-4|CAA93469.1| 539|Caenorhabditis elegans Hypothetical
protein F35G2.4 protein.
Length = 539
Score = 95.5 bits (227), Expect = 1e-20
Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Frame = +2
Query: 38 PNYLGNPINAFTLIKRLTMDLDFIEESI--KIGTEYIKNITMNH--EDVKYPALEDLTGA 205
P ++ NPINA+ LIKRLT + +E + + ++KNIT N +VK+P EDL+GA
Sbjct: 72 PEFVTNPINAYLLIKRLTTEWKKVENIMLNNKASTFLKNITDNRVRSEVKFPGEEDLSGA 131
Query: 206 AQALTRLQETYHLDIRDLSEGMLNGVAYSTPMTASDCYQLGRTLYTHKDF 355
A AL RLQ+TY LD DLS G++ G S ++ D +++GR+ Y KD+
Sbjct: 132 ATALLRLQDTYSLDTLDLSNGIIGGEKVSNKLSGHDTFEVGRSAYNQKDY 181
>Z81134-9|CAB03452.1| 559|Caenorhabditis elegans Hypothetical
protein Y47D3B.10 protein.
Length = 559
Score = 86.6 bits (205), Expect = 5e-18
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Frame = +2
Query: 8 KEHEIAMEDIPNYLGNPINAFTLIKRLTMDLDFIEESIKIGT--EYIKNITMNHEDVKYP 181
K++EI++E+ + NPINAF LIKR D IE + + +IT + V+YP
Sbjct: 62 KKNEISIENGLKDITNPINAFLLIKRKIFDWKEIESKMNANKAGNVVSSITDDSYGVRYP 121
Query: 182 ALEDLTGAAQALTRLQETYHLDIRDLSEGMLNGVAYSTPMTASDCYQLGRTLYTHKDF 355
+DL+GAA L RLQ+TY LD +DL++G + + +A DC+++ R Y DF
Sbjct: 122 TADDLSGAAIGLLRLQDTYRLDTKDLADGKIYADQGNYTFSAKDCFEIARAAYNEHDF 179
>U12762-1|AAA62207.1| 558|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit protein.
Length = 558
Score = 86.6 bits (205), Expect = 5e-18
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Frame = +2
Query: 8 KEHEIAMEDIPNYLGNPINAFTLIKRLTMDLDFIEESIKIGT--EYIKNITMNHEDVKYP 181
K++EI++E+ + NPINAF LIKR D IE + + +IT + V+YP
Sbjct: 62 KKNEISIENGLKDITNPINAFLLIKRKIFDWKEIESKMNANKAGNVVSSITDDSYGVRYP 121
Query: 182 ALEDLTGAAQALTRLQETYHLDIRDLSEGMLNGVAYSTPMTASDCYQLGRTLYTHKDF 355
+DL+GAA L RLQ+TY LD +DL++G + + +A DC+++ R Y DF
Sbjct: 122 TADDLSGAAIGLLRLQDTYRLDTKDLADGKIYADQGNYTFSAKDCFEIARAAYNEHDF 179
>AL031635-12|CAA21045.1| 559|Caenorhabditis elegans Hypothetical
protein Y47D3B.10 protein.
Length = 559
Score = 86.6 bits (205), Expect = 5e-18
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Frame = +2
Query: 8 KEHEIAMEDIPNYLGNPINAFTLIKRLTMDLDFIEESIKIGT--EYIKNITMNHEDVKYP 181
K++EI++E+ + NPINAF LIKR D IE + + +IT + V+YP
Sbjct: 62 KKNEISIENGLKDITNPINAFLLIKRKIFDWKEIESKMNANKAGNVVSSITDDSYGVRYP 121
Query: 182 ALEDLTGAAQALTRLQETYHLDIRDLSEGMLNGVAYSTPMTASDCYQLGRTLYTHKDF 355
+DL+GAA L RLQ+TY LD +DL++G + + +A DC+++ R Y DF
Sbjct: 122 TADDLSGAAIGLLRLQDTYRLDTKDLADGKIYADQGNYTFSAKDCFEIARAAYNEHDF 179
>AJ277376-1|CAB88202.1| 268|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit1 protein.
Length = 268
Score = 86.6 bits (205), Expect = 5e-18
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Frame = +2
Query: 8 KEHEIAMEDIPNYLGNPINAFTLIKRLTMDLDFIEESIKIGT--EYIKNITMNHEDVKYP 181
K++EI++E+ + NPINAF LIKR D IE + + +IT + V+YP
Sbjct: 62 KKNEISIENGLKDITNPINAFLLIKRKIFDWKEIESKMNANKAGNVVSSITDDSYGVRYP 121
Query: 182 ALEDLTGAAQALTRLQETYHLDIRDLSEGMLNGVAYSTPMTASDCYQLGRTLYTHKDF 355
+DL+GAA L RLQ+TY LD +DL++G + + +A DC+++ R Y DF
Sbjct: 122 TADDLSGAAIGLLRLQDTYRLDTKDLADGKIYADQGNYTFSAKDCFEIARAAYNEHDF 179
>AJ270999-1|CAB71298.1| 559|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit1 protein.
Length = 559
Score = 86.6 bits (205), Expect = 5e-18
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Frame = +2
Query: 8 KEHEIAMEDIPNYLGNPINAFTLIKRLTMDLDFIEESIKIGT--EYIKNITMNHEDVKYP 181
K++EI++E+ + NPINAF LIKR D IE + + +IT + V+YP
Sbjct: 62 KKNEISIENGLKDITNPINAFLLIKRKIFDWKEIESKMNANKAGNVVSSITDDSYGVRYP 121
Query: 182 ALEDLTGAAQALTRLQETYHLDIRDLSEGMLNGVAYSTPMTASDCYQLGRTLYTHKDF 355
+DL+GAA L RLQ+TY LD +DL++G + + +A DC+++ R Y DF
Sbjct: 122 TADDLSGAAIGLLRLQDTYRLDTKDLADGKIYADQGNYTFSAKDCFEIARAAYNEHDF 179
>AJ271000-1|CAB71299.1| 91|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit1 protein.
Length = 91
Score = 31.1 bits (67), Expect = 0.24
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 8 KEHEIAMEDIPNYLGNPINAFTLIKRLTMD 97
K++EI++E+ + NPINAF LIKR D
Sbjct: 62 KKNEISIENGLKDITNPINAFLLIKRKIFD 91
>AJ271001-1|CAB71300.1| 58|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit1 protein.
Length = 58
Score = 29.9 bits (64), Expect = 0.56
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 8 KEHEIAMEDIPNYLGNPINAFTLIKR 85
K++EI++E+ + NPINAF LIKR
Sbjct: 32 KKNEISIENGLKDITNPINAFLLIKR 57
>Z14092-8|CAA78471.1| 208|Caenorhabditis elegans Hypothetical
protein R107.7 protein.
Length = 208
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 89 TMDLDFIEESIK-IGTEYIKNITMNHEDVKYPALED-LTGAAQALTRLQETY 238
T +D E ++ + T+Y I N+ED K P ++D L G L +L TY
Sbjct: 84 TTFIDMFYEGLRDLHTKYTTMIYRNYEDGKAPYIKDVLPGELARLEKLFHTY 135
>X13689-1|CAA31979.1| 208|Caenorhabditis elegans protein (
Caenorhabditis elegansgst-1 mRNA for glutathione
S-transferase P subunit. ).
Length = 208
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 89 TMDLDFIEESIK-IGTEYIKNITMNHEDVKYPALED-LTGAAQALTRLQETY 238
T +D E ++ + T+Y I N+ED K P ++D L G L +L TY
Sbjct: 84 TTFIDMFYEGLRDLHTKYTTMIYRNYEDGKAPYIKDVLPGELARLEKLFHTY 135
>AC024753-7|AAF60459.1| 196|Caenorhabditis elegans Hypothetical
protein Y23H5B.3 protein.
Length = 196
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 112 REYQNRNRIYKEYNDESRRREIPRFGRPHGR 204
REY NRIYK N+ S +I G P+ +
Sbjct: 166 REYFGCNRIYKPSNNSSNSLKIKISGNPNSK 196
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 32 DIPNYLG-NPINAFTLIKRLTMDLDFIEESIKIGT 133
D NY+ N + F I RLT D+D I E++K T
Sbjct: 166 DSDNYVPINVLAGFPKIMRLTTDVDLIVEALKEST 200
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 32 DIPNYLG-NPINAFTLIKRLTMDLDFIEESIKIGT 133
D NY+ N + F I RLT D+D I E++K T
Sbjct: 68 DSDNYVPINVLAGFPKIMRLTTDVDLIVEALKEST 102
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 26.6 bits (56), Expect = 5.2
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 89 TMDLDFIEESIKIGTEY---IKNITMNHEDVKYPALEDLTGAAQALTRLQETYHLDIRDL 259
T+ L+ ES+K ++ +N+ + D+ L + GA A + TY L +
Sbjct: 427 TLKLNIPLESLKYLNDFHTLYQNVHIATADIASHNLGTMNGAVHAAGSVS-TYVLQMLSA 485
Query: 260 SEGMLNGVAYSTPMTASDCY 319
++ NGV TP+ ++ Y
Sbjct: 486 ADAQSNGVLRDTPVESTTPY 505
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
F54D1.6 protein.
Length = 1423
Score = 26.2 bits (55), Expect = 6.9
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +2
Query: 137 YIKNITMNHEDVKYPALEDLTGAAQALTRLQETYHLDIRDLSE-----GMLNGVAYSTP 298
Y+ N+ ++ Y LE+ AQ R++E+Y +DI LSE G+LN +A S P
Sbjct: 960 YVNNVERGQPEI-YVVLEE----AQIGIRVRESYAIDIDRLSEYQESMGILN-IAVSVP 1012
>Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical
protein T13F3.2 protein.
Length = 391
Score = 25.8 bits (54), Expect = 9.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 113 ESIKIGTEYIKNITMNHEDVKYPALEDLTGAAQALTRLQETYHLDIRD 256
+S+ YI +I+ N+ D L DL + +TR Q+ ++DI D
Sbjct: 133 KSLLAEVRYIFSISRNYSD---SPLTDLENGFKLITRHQKRRYIDIED 177
>Z82070-5|CAB04915.2| 235|Caenorhabditis elegans Hypothetical
protein W04E12.5 protein.
Length = 235
Score = 25.8 bits (54), Expect = 9.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 113 ESIKIGTEYIKNITMNHEDVKYPALEDLTGAAQALTRLQETY 238
E +K +Y + HE KYP E GAAQ T E +
Sbjct: 37 ELLKKAEKYETEAEIIHEMAKYPENEKNDGAAQEQTGPDEIF 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,903,283
Number of Sequences: 27780
Number of extensions: 151280
Number of successful extensions: 408
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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