Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P19
(359 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 24 0.63
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 24 0.63
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 24 0.63
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 1.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 1.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 1.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 1.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 1.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 1.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 1.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 1.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 1.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 1.9
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 1.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 1.9
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 2.5
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 2.5
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 3.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 5.9
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 5.9
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.8 bits (49), Expect = 0.63
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 47 NNLVYPPLLSHVL 9
NNL Y PLLSH L
Sbjct: 266 NNLYYSPLLSHGL 278
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.8 bits (49), Expect = 0.63
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 19 DSNGGYTKLFRKSHKCFYTYKKTDYGSRFH 108
D N G K+ R S CF+T + F+
Sbjct: 549 DLNSGLNKITRNSLDCFFTMNDLEPSEIFY 578
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.8 bits (49), Expect = 0.63
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 19 DSNGGYTKLFRKSHKCFYTYKKTDYGSRFH 108
D N G K+ R S CF+T + F+
Sbjct: 549 DLNSGLNKITRNSLDCFFTMNDLEPSEIFY 578
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 SRFH*REYQNRNRIYKEYNDESRR 168
SR REY+ +NR Y++ ++E +
Sbjct: 5 SRDRNREYREKNRRYEKLHNEKEK 28
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 SRFH*REYQNRNRIYKEYNDESRR 168
SR REY+ +NR Y++ ++E +
Sbjct: 5 SRDRNREYREKNRRYEKLHNEKEK 28
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 SRFH*REYQNRNRIYKEYNDESRR 168
SR REY+ +NR Y++ ++E +
Sbjct: 5 SRDRNREYREKNRRYEKLHNEKEK 28
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 SRFH*REYQNRNRIYKEYNDESRR 168
SR REY+ +NR Y++ ++E +
Sbjct: 5 SRDRNREYREKNRRYEKLHNEKEK 28
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 SRFH*REYQNRNRIYKEYNDESRR 168
SR REY+ +NR Y++ ++E +
Sbjct: 5 SRDRNREYREKNRRYEKLHNEKEK 28
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 SRFH*REYQNRNRIYKEYNDESRR 168
SR REY+ +NR Y++ ++E +
Sbjct: 5 SRDRNREYREKNRRYEKLHNEKEK 28
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 SRFH*REYQNRNRIYKEYNDESRR 168
SR REY+ +NR Y++ ++E +
Sbjct: 5 SRDRNREYREKNRRYEKLHNEKEK 28
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 1.9
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 113 ESIKIGTEYIKNI 151
E++ +G+E+IKNI
Sbjct: 81 ETLSVGSEFIKNI 93
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 1.9
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 113 ESIKIGTEYIKNI 151
E++ +G+E+IKNI
Sbjct: 81 ETLSVGSEFIKNI 93
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 1.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 49 RKSHKCFYTYKKTDYGSRFH*REYQNRNRIYKEYNDESRRRE 174
R SHK + ++ + S + REY+ KE + R RE
Sbjct: 266 RTSHKRYSRSREREQKSYKNEREYRKYRETSKERFRDRRERE 307
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.2 bits (45), Expect = 1.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 47 NNLVYPPLLSHVL 9
NNL Y PL SH L
Sbjct: 264 NNLYYSPLTSHSL 276
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.2 bits (45), Expect = 1.9
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 113 ESIKIGTEYIKNI 151
E++ +G+E+IKNI
Sbjct: 20 ETLSVGSEFIKNI 32
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 2.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 53 NPINAFTLIKRLTMDLDFIEESIKIGTEYIKNITMNHEDVKY 178
N N R+TM ++ E I G + + I HE+VKY
Sbjct: 26 NAANFSNFEDRVTM---YVYEEIINGKKLTEIINETHENVKY 64
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 248 IRDLSEGMLNGVAYSTPMTASD 313
I +L + MLNG P TA +
Sbjct: 285 ISELEKEMLNGQKLQGPFTAEE 306
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 2.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 47 NNLVYPPLLSHVL 9
NNL Y PL SH L
Sbjct: 261 NNLYYSPLASHGL 273
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 3.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 241 VIGLL*PGQCLCRAREVFQSGVFHVFVIHRYILYIFCSY 125
+I +L GQ +C + S ++R LY+FC Y
Sbjct: 14 IINVLLHGQVICFVCKDITS----TSALYRLKLYLFCDY 48
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 20.6 bits (41), Expect = 5.9
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +1
Query: 76 YKKTDYGSRFH*REYQNRNRIYKEYNDESRRRE 174
Y+ DYG++ + + + + +E NDE ++
Sbjct: 116 YEDNDYGNQDNRNDRRKKTFAAREDNDEEEAQK 148
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 231 RPITWTYVISPREC*TVLPTV 293
RP+++ ++SPR ++ TV
Sbjct: 169 RPVSYPQIMSPRRARLLVATV 189
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,832
Number of Sequences: 438
Number of extensions: 2161
Number of successful extensions: 24
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8432340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -