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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P18
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19154-3|CAA79555.1|  291|Caenorhabditis elegans Hypothetical pr...    88   5e-18
Z68749-3|CAA92958.1|  288|Caenorhabditis elegans Hypothetical pr...    80   1e-15
AF244356-1|AAF70462.1|  288|Caenorhabditis elegans long chain po...    80   1e-15
U61954-12|AAK29807.1|  274|Caenorhabditis elegans Fatty acid elo...    77   9e-15
U41011-5|AAA82288.2|  320|Caenorhabditis elegans Fatty acid elon...    74   9e-14
Z68749-1|CAA92960.2|  309|Caenorhabditis elegans Hypothetical pr...    72   3e-13
AL132949-2|CAB61069.1|  286|Caenorhabditis elegans Hypothetical ...    71   8e-13
Z81058-5|CAB02921.1|  274|Caenorhabditis elegans Hypothetical pr...    64   7e-11
U61954-9|AAK29808.1|  286|Caenorhabditis elegans Fatty acid elon...    49   3e-06
U43282-6|AAA83617.1|  249|Caenorhabditis elegans Hypothetical pr...    31   0.61 
U10438-16|AAO61447.1|  977|Caenorhabditis elegans Glutamate rece...    29   2.4  
U10438-15|AAA19090.3|  908|Caenorhabditis elegans Glutamate rece...    29   2.4  
AF318606-1|AAK01094.2|  977|Caenorhabditis elegans non-NMDA iono...    29   2.4  
Z73896-3|CAA98060.1|  208|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z70307-2|CAA94335.1|  208|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z22178-6|CAA80158.2|  265|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AF016424-5|AAB65326.1|  282|Caenorhabditis elegans Hypothetical ...    27   7.5  
U97189-2|AAC48165.2|  336|Caenorhabditis elegans Serpentine rece...    27   9.9  
U39851-2|AAF99874.1|  540|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF047658-4|AAC04417.1|  392|Caenorhabditis elegans Hypothetical ...    27   9.9  
AF022985-3|AAB69970.1|  355|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z19154-3|CAA79555.1|  291|Caenorhabditis elegans Hypothetical
           protein C40H1.4 protein.
          Length = 291

 Score = 87.8 bits (208), Expect = 5e-18
 Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
 Frame = +2

Query: 17  YVIIVKVIGPKFMENRKPFELKKVLIWYN----LFQVI----FSIWLFYESIASGWFTTY 172
           Y I++KVI  KFMENRKPF LK  LI +N     F +I    FSI       A G++ T 
Sbjct: 62  YFILIKVI-QKFMENRKPFTLKYPLILWNGALAAFSIIATLRFSIDPLRSLYAEGFYKTL 120

Query: 173 SFRCQPVDYSRSPEVMRTVSGCWWYYF--SKFTEFFDTIFFVMRKKFDQVSKLHVIHH-G 343
            + C P D          V+  W + F  SK  E  DT+F ++RK+   +  LH  HH  
Sbjct: 121 CYSCNPTD----------VAAFWSFAFALSKIVELGDTMFIILRKR--PLIFLHYYHHAA 168

Query: 344 IMPMSVWFGVKFTPGGHSTFFGMLNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQM 523
           ++  +V  G + T  G   F+ ++N F H +MY+YY ++A+G  + K  W    +T +Q 
Sbjct: 169 VLIYTVHSGAEHTAAGR--FYILMNYFAHSLMYTYYTVSAMGYRLPK--WVSMTVTTVQT 224

Query: 524 VQFI 535
            Q +
Sbjct: 225 TQML 228


>Z68749-3|CAA92958.1|  288|Caenorhabditis elegans Hypothetical
           protein F56H11.4 protein.
          Length = 288

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
 Frame = +2

Query: 26  IVKVIGPK-FMENRKPFELKKVLIWYNLFQVIFSIWLFYESIASGWFTTYSFRCQPVDYS 202
           +V V G K FM NR+PF+L   L  +N     FSI      +   +F T + +     Y 
Sbjct: 55  MVVVFGTKWFMRNRQPFQLTIPLNIWNFILAAFSI-AGAVKMTPEFFGTIANKGIVASYC 113

Query: 203 RSPEVMRTVSGCWWYYF--SKFTEFFDTIFFVMRKKFDQVSKLHVIHHGIMPMSVWFGVK 376
           +  +  +  +G W + F  SK  E  DTIF V+RK+   +  LH  HH +  +  W+   
Sbjct: 114 KVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRKR--PLMFLHWYHHILTMIYAWYSHP 171

Query: 377 FTPGGHSTFFGMLNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQMVQFIL 538
            TP G + +   LN  VH  MYSYY L ++   V  ++   + +T+LQ+VQFI+
Sbjct: 172 LTP-GFNRYGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFII 222


>AF244356-1|AAF70462.1|  288|Caenorhabditis elegans long chain
           polyunsaturated fattyacid elongation enzyme protein.
          Length = 288

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
 Frame = +2

Query: 26  IVKVIGPK-FMENRKPFELKKVLIWYNLFQVIFSIWLFYESIASGWFTTYSFRCQPVDYS 202
           +V V G K FM NR+PF+L   L  +N     FSI      +   +F T + +     Y 
Sbjct: 55  MVVVFGTKWFMRNRQPFQLTIPLNIWNFILAAFSI-AGAVKMTPEFFGTIANKGIVASYC 113

Query: 203 RSPEVMRTVSGCWWYYF--SKFTEFFDTIFFVMRKKFDQVSKLHVIHHGIMPMSVWFGVK 376
           +  +  +  +G W + F  SK  E  DTIF V+RK+   +  LH  HH +  +  W+   
Sbjct: 114 KVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRKR--PLMFLHWYHHILTMIYAWYSHP 171

Query: 377 FTPGGHSTFFGMLNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQMVQFIL 538
            TP G + +   LN  VH  MYSYY L ++   V  ++   + +T+LQ+VQFI+
Sbjct: 172 LTP-GFNRYGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFII 222


>U61954-12|AAK29807.1|  274|Caenorhabditis elegans Fatty acid
           elongation protein 6 protein.
          Length = 274

 Score = 77.0 bits (181), Expect = 9e-15
 Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
 Frame = +2

Query: 11  LTYVIIVKVIGPK-FMENRKPFELKKVLIWYNLFQVIFSIWLFYESIASGWFTTYSFRCQ 187
           + YV+++   G K  M NRKPF+L   L  +N    IFS      S+A+ +   + F  +
Sbjct: 38  MAYVVVI--FGLKAVMTNRKPFDLTGPLNLWNAGLAIFST---LGSLATTFGLLHEFFSR 92

Query: 188 PV--DYSRSPEVMRTVSGC--WWYYFSKFTEFFDTIFFVMRKKFDQVSKLHVIHHGIMPM 355
                Y    +    +SG   W +  SK  EF DT+F ++RKK   +  LH  HH ++ M
Sbjct: 93  GFFESYIHIGDFYNGLSGMFTWLFVLSKVAEFGDTLFIILRKK--PLMFLHWYHH-VLTM 149

Query: 356 SVWFGVKFTPGGHSTFFGMLNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQMVQFI 535
           +  F       G +T+   +N  VH IMY YY+L + G  V    W  K +T +Q++QF+
Sbjct: 150 NYAFMSFEANLGFNTWITWMNFSVHSIMYGYYMLRSFGVKVP--AWIAKNITTMQILQFV 207

Query: 536 LVFIHAFQLLFI 571
           +     F + ++
Sbjct: 208 ITHFILFHVGYL 219


>U41011-5|AAA82288.2|  320|Caenorhabditis elegans Fatty acid
           elongation protein 3 protein.
          Length = 320

 Score = 73.7 bits (173), Expect = 9e-14
 Identities = 61/179 (34%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
 Frame = +2

Query: 20  VIIVKVI--GPKFMENRKPFELKKVLIWYNLFQVIFSIWLFYESIASGWFTTYSFRCQPV 193
           V+ V VI  G K ME  KPF+L   L  +N F  IFSI L +  +   +  ++S      
Sbjct: 46  VVYVAVIFTGKKIMEKYKPFQLDTPLFVWNSFLAIFSI-LGFLRMTPEFVWSWSAEGNSF 104

Query: 194 DYS-RSPEVMRTVSGCWWYYF--SKFTEFFDTIFFVMRKKFDQVSKLHVIHHGIMPMSVW 364
            YS       + V+G W   F  SK  E  DTIF V+RK+   +  LH  HH  + +  W
Sbjct: 105 KYSICHSSYAQGVTGFWTEQFAMSKLFELIDTIFIVLRKR--PLIFLHWYHHVTVMIYTW 162

Query: 365 FGVK-FTPGGHSTFFGMLNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQMVQFIL 538
              K  T  G   +F  +N  VH +MYSYY L +L   + K +     +T LQ+ Q ++
Sbjct: 163 HAYKDHTASGR--WFIWMNYGVHALMYSYYALRSLKFRLPKQM--AMVVTTLQLAQMVM 217


>Z68749-1|CAA92960.2|  309|Caenorhabditis elegans Hypothetical
           protein F56H11.3 protein.
          Length = 309

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
 Frame = +2

Query: 11  LTYVIIVKVIGPKFMENRKPFELKKVLIWYNLFQVIFSIWLFYESIASGWFTTYSFRCQP 190
           + YVI+V  I  +FM +R+PF+L   L  +N F  +FSI+        G +T + F  Q 
Sbjct: 74  IAYVILVFSI-KRFMRDREPFQLTTALRLWNFFLSVFSIY--------GSWTMFPFMVQQ 124

Query: 191 VD----YSRSPEVMRTV--SGCWWYY---FSKFTEFFDTIFFVMRKKFDQVSKLHVIHHG 343
           +     Y    E +  +     +W +    SK  EF DT F V+RKK   +  LH  HH 
Sbjct: 125 IRLYGLYGCGCEALSNLPSQAEYWLFLTILSKAVEFVDTFFLVLRKK--PLIFLHWYHH- 181

Query: 344 IMPMSVWFGVKF-TPGGHSTFFGMLNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQ 520
            M   V+F   + TP   S    ++N FVH  MY YY   ++   V   +     +T LQ
Sbjct: 182 -MATFVFFCSNYPTPSSQSRVGVIVNLFVHAFMYPYYFTRSMNIKVPAKI--SMAVTVLQ 238

Query: 521 MVQFILVFIHAFQLLF 568
           + QF + FI+   L++
Sbjct: 239 LTQF-MCFIYGCTLMY 253


>AL132949-2|CAB61069.1|  286|Caenorhabditis elegans Hypothetical
           protein Y53F4B.2 protein.
          Length = 286

 Score = 70.5 bits (165), Expect = 8e-13
 Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 9/183 (4%)
 Frame = +2

Query: 17  YVIIVKVIGPKFMENRKPFELKKVLIWYNLFQVIFSI---WL----FYESI-ASGWFTTY 172
           Y+I   ++  ++ME+RKP  ++ +L+ +N F  +FSI   W     FY+++   G+  + 
Sbjct: 59  YIIATNLL-QRYMESRKPKSMRPLLLAWNGFLAVFSIMGTWRFGIEFYDAVFRRGFIDSI 117

Query: 173 SFRCQPVDYSRSPEVMRTVSGCWWYYFSKFTEFFDTIFFVMRKKFDQVSKLHVIHHGIMP 352
                P    RSP        C  +  SK  EF DT+F V+RK+   V  LH  HH ++ 
Sbjct: 118 CLAVNP----RSPSAF---WAC-MFALSKIAEFGDTMFLVLRKR--PVIFLHWYHHAVVL 167

Query: 353 MSVWF-GVKFTPGGHSTFFGMLNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQMVQ 529
           +  W   ++ T  G   +F  +N  VH IMY+YY + ++G  + K +     +T LQ +Q
Sbjct: 168 ILSWHAAIELTAPGR--WFIFMNYLVHSIMYTYYAITSIGYRLPKIV--SMTVTFLQTLQ 223

Query: 530 FIL 538
            ++
Sbjct: 224 MLI 226


>Z81058-5|CAB02921.1|  274|Caenorhabditis elegans Hypothetical
           protein F11E6.5 protein.
          Length = 274

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
 Frame = +2

Query: 23  IIVKVIGPKFMENRKPFELKKVLIWYNLFQVIFSIWLFYESIAS--GWFTTYSF---RCQ 187
           ++    G K M +RKPF+L+  L  +N    +FS    Y+ I    G F    F    CQ
Sbjct: 44  LVTIYFGQKLMAHRKPFDLQNTLALWNFGFSLFSGIAAYKLIPELFGVFMKDGFVASYCQ 103

Query: 188 PVDYSRSPEVMRTVSGCWWYYFSKFTEFFDTIFFVMRKKFDQVSKLHVIHHGIMPMSVWF 367
             +Y        T    W +  SK  E  DT+F V+RKK   V  +H  HH +    V+ 
Sbjct: 104 NENYYTDAS---TGFWGWAFVMSKAPELGDTMFLVLRKK--PVIFMHWYHHAL--TFVYA 156

Query: 368 GVKFTPGGHSTFFGM-LNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQMVQFILVF 544
            V ++       + + LN  VH +MY Y+ + AL  N+Q      K++T +Q+VQF++  
Sbjct: 157 VVTYSEHQAWARWSLALNLAVHTVMYFYFAVRAL--NIQTPRPVAKFITTIQIVQFVISC 214

Query: 545 IHAFQLLFI 571
                L+FI
Sbjct: 215 YIFGHLVFI 223


>U61954-9|AAK29808.1|  286|Caenorhabditis elegans Fatty acid
           elongation protein 5 protein.
          Length = 286

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
 Frame = +2

Query: 26  IVKVIGPKF-MENRKPFELKKVLIWYNLFQVIFSIWLFYESIASGWFTTYSFRCQPVDYS 202
           I  + G K+ M++RK F+L   L  +N     FS+  F  +  +   +          YS
Sbjct: 46  IATIFGLKYYMKDRKAFDLSTPLNIWNGILSTFSLLGFLFTFPT-LLSVIRKDGFSHTYS 104

Query: 203 RSPEVMR-TVSGCWWYYF--SKFTEFFDTIFFVMRKKFDQVSKLHVIHHGIMPMSVWFGV 373
              E+   + SG W + +  SK  E  DT+F V+RK+   +  +H  HH +         
Sbjct: 105 HVSELYTDSTSGYWIFLWVISKIPELLDTVFIVLRKR--PLIFMHWYHHALTGYYALV-C 161

Query: 374 KFTPGGHSTFFGMLNTFVHIIMYSYYLLAALGTNVQKYLWWKKYLTALQMVQF 532
                 H  +   +N  +H  MY YYLL +L   +   +   + +T  QMVQF
Sbjct: 162 YHEDAVHMVWVVWMNYIIHAFMYGYYLLKSLKVPIPPSV--AQAITTSQMVQF 212


>U43282-6|AAA83617.1|  249|Caenorhabditis elegans Hypothetical
           protein T22E5.6 protein.
          Length = 249

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 14/77 (18%), Positives = 34/77 (44%)
 Frame = +2

Query: 80  KKVLIWYNLFQVIFSIWLFYESIASGWFTTYSFRCQPVDYSRSPEVMRTVSGCWWYYFSK 259
           K+ L +++   V   +W+    +    + TY+    P+   +     +  SG W+++   
Sbjct: 136 KRKLAFFHAMLVPVGLWIILLLLVL--YETYTDNLLPLSLRKEDYKYKIGSGFWFFFLGG 193

Query: 260 FTEFFDTIFFVMRKKFD 310
              F   ++F+ R++ D
Sbjct: 194 LLPFIGALYFLFREQMD 210


>U10438-16|AAO61447.1|  977|Caenorhabditis elegans Glutamate
           receptor family (ampa)protein 2, isoform b protein.
          Length = 977

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 158 WFTTYSFRCQPVDYSRSPEVMRTVSGCWWYY 250
           WFT  +F  Q  D        R  S CWW++
Sbjct: 670 WFTLAAFMQQGTDILPRAVSGRIASSCWWFF 700


>U10438-15|AAA19090.3|  908|Caenorhabditis elegans Glutamate
           receptor family (ampa)protein 2, isoform a protein.
          Length = 908

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 158 WFTTYSFRCQPVDYSRSPEVMRTVSGCWWYY 250
           WFT  +F  Q  D        R  S CWW++
Sbjct: 601 WFTLAAFMQQGTDILPRAVSGRIASSCWWFF 631


>AF318606-1|AAK01094.2|  977|Caenorhabditis elegans non-NMDA
           ionotropic glutamate receptorsubunit GLR-2 protein.
          Length = 977

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 158 WFTTYSFRCQPVDYSRSPEVMRTVSGCWWYY 250
           WFT  +F  Q  D        R  S CWW++
Sbjct: 670 WFTLAAFMQQGTDILPRAVSGRIASSCWWFF 700


>Z73896-3|CAA98060.1|  208|Caenorhabditis elegans Hypothetical
           protein F09E8.5 protein.
          Length = 208

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 66  NHLNSRKYLSGTTCSK 113
           N+LN   Y SGTTCSK
Sbjct: 178 NYLNQNIYTSGTTCSK 193


>Z70307-2|CAA94335.1|  208|Caenorhabditis elegans Hypothetical
           protein C39E9.2 protein.
          Length = 208

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 66  NHLNSRKYLSGTTCSK 113
           N+LN   Y SGTTCSK
Sbjct: 178 NYLNQNIYTSGTTCSK 193


>Z22178-6|CAA80158.2|  265|Caenorhabditis elegans Hypothetical
           protein F54C8.6 protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +2

Query: 134 FYESIASGWFTT-YSFRCQPVDYSRSPEVMRTVSGCWWYYFSKFTEFFDTIFFVMRKKFD 310
           F+    SG F+  +   C+P  Y  S E+ + +SG     F   +EFF TI     K F 
Sbjct: 131 FFCRYFSGPFSPLFDALCEPDPYVLSEELPKVMSGLLDEMFITISEFFQTI----SKGFT 186

Query: 311 QVSKLH-VIHHGIMPMSVWFG 370
               L   I HG+   +V+FG
Sbjct: 187 VFGTLFTAIWHGLSE-NVFFG 206


>AF016424-5|AAB65326.1|  282|Caenorhabditis elegans Hypothetical
           protein F39G3.4 protein.
          Length = 282

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 131 LFYESIASGWFTTYSFRCQPVDY-SRSPEVMRTV 229
           L Y    S  F TY F+C P DY SR   V R V
Sbjct: 176 LVYSGQLSFGFCTYLFKCTPKDYQSRLMPVHRAV 209


>U97189-2|AAC48165.2|  336|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 15 protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 392 HSTFFGMLNTFVHIIMYSYYLLAAL 466
           HST F +   F H+I++ +Y++  +
Sbjct: 231 HSTKFAVFVVFCHVILFGFYVIGIM 255


>U39851-2|AAF99874.1|  540|Caenorhabditis elegans Hypothetical
           protein C23G10.6 protein.
          Length = 540

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 374 KFTPGGHSTFFGMLNTF-VHI-IMYSYYLLAALGTNVQKYL 490
           K  P G S  F   N F +H  ++++Y++LA    N+ K+L
Sbjct: 484 KMDPYGRSLNFFTRNLFDIHAAVVFTYFILATASFNILKFL 524


>AF047658-4|AAC04417.1|  392|Caenorhabditis elegans Hypothetical
           protein K03H6.1 protein.
          Length = 392

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
 Frame = -1

Query: 403 ERRMTTRCEFNSKPY*HRHNTMM---NYVKFRHLIKFFAHHEEYCV-EELCEF*EVIPPT 236
           ER +  R  F +K Y  R   ++   +      L+  + H E  CV EE C   +++   
Sbjct: 136 ERYLIVRSPFRAKLYWQRGKMVVVLSSIFVTTGLLTVYHHFEWDCVIEEFCNGTQLLDFC 195

Query: 235 AANGPHYFRTSRIVDWLASKTVR 167
             +G  + +T R  DW+    V+
Sbjct: 196 YYSGMRHQKTYRNKDWVTPSNVK 218


>AF022985-3|AAB69970.1|  355|Caenorhabditis elegans Hypothetical
           protein T15B7.11 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 397 YVLWHAQHLRPYHYVFLLSVGCF 465
           ++++  +H RPYHY  L S+  F
Sbjct: 30  FIIFAVEHYRPYHYYLLSSLIVF 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,378,012
Number of Sequences: 27780
Number of extensions: 321785
Number of successful extensions: 935
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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