Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P18
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.0  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.0  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 476 VQKYLWWKK 502
           VQK+LWW K
Sbjct: 78  VQKFLWWYK 86


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 476 VQKYLWWKK 502
           VQK+LWW K
Sbjct: 78  VQKFLWWYK 86


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 355 HRHNTMMNYVKFRHLIK 305
           HR   + N V+FR+L+K
Sbjct: 382 HRWRQIYNMVRFRNLVK 398


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 475 ISAQSSQQIVRIHNDMDEGVEHAKERRMTTRCEFNSK 365
           + AQ S+ + R+H  ++   +   E+    R EF+ K
Sbjct: 386 LEAQWSRVLGRVHATIERNEKRLAEQDRRERMEFDWK 422


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +2

Query: 305 FDQVSKLHVIHHGI 346
           +D + +L+++H+GI
Sbjct: 503 YDTICQLNIVHYGI 516


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,752
Number of Sequences: 438
Number of extensions: 3885
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)