Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P17
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   0.71 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   2.9  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   6.6  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   6.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   6.6  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   6.6  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   6.6  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   6.6  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   6.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   6.6  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 174 PATRAPPYAPENDTHGSHTLH 112
           P  RAP +  EN+T    TLH
Sbjct: 112 PRMRAPSFICENETRQGLTLH 132


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 185 YELCLQPAPLLTPPKTTHMVPILCTD 108
           Y + ++  P+LTPP +  + P+   D
Sbjct: 425 YGIRVERDPILTPPSSNPVSPVPSPD 450


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 62  NNIE*QSRCGHWRLQNQCKVW 124
           N I+ +SR    RLQ++ +VW
Sbjct: 23  NKIDLRSRTKEERLQHRREVW 43


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 62  NNIE*QSRCGHWRLQNQCKVW 124
           N I+ +SR    RLQ++ +VW
Sbjct: 23  NKIDLRSRTKEERLQHRREVW 43


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 62  NNIE*QSRCGHWRLQNQCKVW 124
           N I+ +SR    RLQ++ +VW
Sbjct: 23  NKIDLRSRTKEERLQHRREVW 43


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 62  NNIE*QSRCGHWRLQNQCKVW 124
           N I+ +SR    RLQ++ +VW
Sbjct: 23  NKIDLRSRTKEERLQHRREVW 43


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 62  NNIE*QSRCGHWRLQNQCKVW 124
           N I+ +SR    RLQ++ +VW
Sbjct: 23  NKIDLRSRTKEERLQHRREVW 43


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 62  NNIE*QSRCGHWRLQNQCKVW 124
           N I+ +SR    RLQ++ +VW
Sbjct: 23  NKIDLRSRTKEERLQHRREVW 43


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 62  NNIE*QSRCGHWRLQNQCKVW 124
           N I+ +SR    RLQ++ +VW
Sbjct: 23  NKIDLRSRTKEERLQHRREVW 43


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 78  KVVAVTGDCKISAKYGNHVCRFRG 149
           K + V+ + K+   YG+ VC++ G
Sbjct: 264 KPLDVSSNDKVHPLYGHGVCKWPG 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,280
Number of Sequences: 438
Number of extensions: 2121
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)