Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P16
         (524 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0E558 Cluster: Chromosome undetermined scaffold_79, wh...    36   0.75 
UniRef50_Q7UHG7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_A0E558 Cluster: Chromosome undetermined scaffold_79, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_79,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 786

 Score = 35.5 bits (78), Expect = 0.75
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = -2

Query: 355 TRALKEPLKSRRWIQHSLLHFLNFPLHVT*FELSIDKQ*SY--KTIVQSFYLRKGAFLNA 182
           T AL + L+S R++  +L HF   PLH     L  DK+  Y  K  V S +  + ++   
Sbjct: 42  TDALIQKLESHRFL--NLDHFYKIPLHQFSDILKYDKELEYKLKEFVASTFDTQFSWFIQ 99

Query: 181 NHYLI*HLDKCGRFYTYFRKVLVISQSS 98
           N Y++ HLD C      F   L  SQ++
Sbjct: 100 NEYIVTHLD-CSYQVDQFLNKLFYSQTN 126


>UniRef50_Q7UHG7 Cluster: Putative uncharacterized protein; n=1;
           Pirellula sp.|Rep: Putative uncharacterized protein -
           Rhodopirellula baltica
          Length = 367

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = -2

Query: 457 HRSLNKLDFTQANITNCEYSI*TARLLEGARIGCTRALKEPLKSRRWIQHSLLHFLNF 284
           HR L    FT +     E  +   R+  G  +  T  +   L  R W+   LLHFLNF
Sbjct: 60  HRRLFHFPFTPSREAMLEIVVWQTRIAMGLLLVWTAGVAWSLAQRCWLCVRLLHFLNF 117


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,879,003
Number of Sequences: 1657284
Number of extensions: 7547195
Number of successful extensions: 13274
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13271
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)