Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P16
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           24   3.6  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           24   3.6  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           24   3.6  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           24   3.6  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   6.3  

>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 442 KLDFTQANITNCEYSI*TARLLEGARIGCTRALKE 338
           KLD+ Q  +T  +YS+   R++   R+    A+ E
Sbjct: 22  KLDYLQHKLTVMDYSLKEDRVIIDRRLAYQEAISE 56


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 442 KLDFTQANITNCEYSI*TARLLEGARIGCTRALKE 338
           KLD+ Q  +T  +YS+   R++   R+    A+ E
Sbjct: 22  KLDYLQHKLTVIDYSLKEDRVIIDRRLAYQEAISE 56


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 442 KLDFTQANITNCEYSI*TARLLEGARIGCTRALKE 338
           KLD+ Q  +T  +YS+   R++   R+    A+ E
Sbjct: 22  KLDYLQHKLTVMDYSLKEDRVIIDRRLAYQEAISE 56


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 442 KLDFTQANITNCEYSI*TARLLEGARIGCTRALKE 338
           KLD+ Q  +T  +YS+   R++   R+    A+ E
Sbjct: 22  KLDYLQHKLTVMDYSLKEDRVIIDRRLAYQEAISE 56


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 279 RGKLRKCNKLCCIQRRLFSGSFSARVQPILAPS 377
           RG+L+       +QRRL S    ARV P+  P+
Sbjct: 2   RGRLKLAVTPRTVQRRLVSAGLLARV-PVKVPN 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,997
Number of Sequences: 2352
Number of extensions: 9181
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)