Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P15
(552 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 292 5e-79
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 292 5e-79
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 292 5e-79
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 292 5e-79
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 292 5e-79
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 292 5e-79
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 292 5e-79
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 290 2e-78
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 287 2e-77
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 287 2e-77
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 287 2e-77
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 287 2e-77
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 287 2e-77
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 285 7e-77
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 279 6e-75
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 255 7e-68
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 252 5e-67
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 5e-25
AL109964-5|CAI42207.1| 132|Homo sapiens chromosome 20 open read... 32 1.2
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.5
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.5
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 3.6
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 3.6
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.6
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 3.6
U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosyl... 30 4.7
AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA glycos... 30 4.7
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 6.2
X55415-2|CAA39074.1| 385|Homo sapiens protein ( Human mRNA for ... 29 8.2
X55415-1|CAA39073.1| 398|Homo sapiens protein ( Human mRNA for ... 29 8.2
X14085-1|CAA32247.1| 400|Homo sapiens beta-1,4-galactosyltransf... 29 8.2
X13223-1|CAA31611.1| 398|Homo sapiens lactose synthase protein. 29 8.2
U10474-1|AAA68220.1| 340|Homo sapiens beta-1,4-galactosyltransf... 29 8.2
U10473-1|AAA68219.1| 308|Homo sapiens beta-1,4-galactosyltransf... 29 8.2
M70432-1|AAB00776.1| 400|Homo sapiens beta-1,4-galactosyltransf... 29 8.2
M22921-2|AAA35937.1| 385|Homo sapiens protein ( Human beta 1,4-... 29 8.2
M22921-1|AAA35936.1| 397|Homo sapiens protein ( Human beta 1,4-... 29 8.2
M13701-1|AAA35935.1| 261|Homo sapiens protein ( Human galactosy... 29 8.2
D29805-1|BAA06188.1| 398|Homo sapiens beta-1,4-galactosyltransf... 29 8.2
BC045773-1|AAH45773.1| 225|Homo sapiens B4GALT1 protein protein. 29 8.2
AL161445-4|CAD13306.1| 398|Homo sapiens UDP-Gal:betaGlcNAc beta... 29 8.2
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 292 bits (717), Expect = 5e-79
Identities = 130/168 (77%), Positives = 148/168 (88%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 292 bits (717), Expect = 5e-79
Identities = 130/168 (77%), Positives = 148/168 (88%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 292 bits (717), Expect = 5e-79
Identities = 130/168 (77%), Positives = 148/168 (88%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 292 bits (717), Expect = 5e-79
Identities = 130/168 (77%), Positives = 148/168 (88%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 292 bits (717), Expect = 5e-79
Identities = 130/168 (77%), Positives = 148/168 (88%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 292 bits (717), Expect = 5e-79
Identities = 130/168 (77%), Positives = 148/168 (88%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 292 bits (717), Expect = 5e-79
Identities = 130/168 (77%), Positives = 148/168 (88%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 290 bits (712), Expect = 2e-78
Identities = 129/168 (76%), Positives = 147/168 (87%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 287 bits (704), Expect = 2e-77
Identities = 127/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 287 bits (704), Expect = 2e-77
Identities = 127/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 287 bits (704), Expect = 2e-77
Identities = 127/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 287 bits (704), Expect = 2e-77
Identities = 127/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 287 bits (704), Expect = 2e-77
Identities = 127/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ +
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 168
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 285 bits (699), Expect = 7e-77
Identities = 126/167 (75%), Positives = 145/167 (86%)
Frame = +3
Query: 24 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 203
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 204 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 383
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 384 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ +
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGK 167
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 279 bits (683), Expect = 6e-75
Identities = 123/168 (73%), Positives = 144/168 (85%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 200
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 201 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 380
V KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 381 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ +
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGK 168
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 255 bits (625), Expect = 7e-68
Identities = 113/148 (76%), Positives = 130/148 (87%)
Frame = +3
Query: 81 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 260
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 261 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLV 440
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 441 THDGRTLRYPDPLIKVNDSVQLDISXNQ 524
THD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGK 148
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 252 bits (618), Expect = 5e-67
Identities = 114/150 (76%), Positives = 131/150 (87%)
Frame = +3
Query: 75 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 254
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 255 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPY 434
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 435 LVTHDGRTLRYPDPLIKVNDSVQLDISXNQ 524
LVTHD RT+RYPDPLIKVND++Q+D+ +
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGK 149
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 5e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 188
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AL109964-5|CAI42207.1| 132|Homo sapiens chromosome 20 open reading
frame 102 protein.
Length = 132
Score = 32.3 bits (70), Expect = 1.2
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Frame = +2
Query: 392 QGAARRDRPQERAVPGDAR-RAHAPVP--------GPAHQGERL--GAARHLXQPRSWTS 538
QG ++ PQ VPG+A R H VP GPA QG+ L GAAR +P S S
Sbjct: 43 QGGGQQHLPQAAPVPGEAHGRRHLRVPRHRLQRRQGPAPQGQGLPAGAARGELRPASARS 102
Query: 539 SS 544
S
Sbjct: 103 PS 104
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 31.9 bits (69), Expect = 1.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 261 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 407
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 1.5
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 407 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 508
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 371 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG 487
R ++ G ARR R +VPG ARR PGPA +G
Sbjct: 257 RLSPESAPGPARRGRA---SVPGPARRGCDSAPGPARRG 292
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +3
Query: 102 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 269
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 270 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 362
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 261 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 407
+YPA + D I + E+FRL+ + + +I + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +3
Query: 102 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 269
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 270 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 362
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosylase
protein.
Length = 351
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 148 GKHSRSLWGPVEGRGAYTPPSL 83
G RSLWGP G TPPSL
Sbjct: 300 GNFFRSLWGPYAGWAQATPPSL 321
>AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA
glycosylase protein.
Length = 341
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 148 GKHSRSLWGPVEGRGAYTPPSL 83
G RSLWGP G TPPSL
Sbjct: 290 GNFFRSLWGPYAGWAQATPPSL 311
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 252 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATG 416
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>X55415-2|CAA39074.1| 385|Homo sapiens protein ( Human mRNA for
UDP_galactose:N-acetylglucosaminide-(beta 1->4)
galactosyltransferase. ).
Length = 385
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 149 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 182
>X55415-1|CAA39073.1| 398|Homo sapiens protein ( Human mRNA for
UDP_galactose:N-acetylglucosaminide-(beta 1->4)
galactosyltransferase. ).
Length = 398
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>X14085-1|CAA32247.1| 400|Homo sapiens
beta-1,4-galactosyltransferase (AA -77 to 323) protein.
Length = 400
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>X13223-1|CAA31611.1| 398|Homo sapiens lactose synthase protein.
Length = 398
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>U10474-1|AAA68220.1| 340|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 340
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>U10473-1|AAA68219.1| 308|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 308
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 72 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 105
>M70432-1|AAB00776.1| 400|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 400
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>M22921-2|AAA35937.1| 385|Homo sapiens protein ( Human beta
1,4-galactosyl-transferase mRNA, complete cds. ).
Length = 385
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 149 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 182
>M22921-1|AAA35936.1| 397|Homo sapiens protein ( Human beta
1,4-galactosyl-transferase mRNA, complete cds. ).
Length = 397
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>M13701-1|AAA35935.1| 261|Homo sapiens protein ( Human
galactosyltransferase mRNA, 3' end. ).
Length = 261
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 25 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 58
>D29805-1|BAA06188.1| 398|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 398
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>BC045773-1|AAH45773.1| 225|Homo sapiens B4GALT1 protein protein.
Length = 225
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>AL161445-4|CAD13306.1| 398|Homo sapiens UDP-Gal:betaGlcNAc beta
1,4-galactosyltransferase, polypeptide 1 protein.
Length = 398
Score = 29.5 bits (63), Expect = 8.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 84 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 188
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,395,984
Number of Sequences: 237096
Number of extensions: 1929554
Number of successful extensions: 13974
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 13801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13973
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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