Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P13
         (528 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U17473-1|AAA62158.1|  461|Homo sapiens calcitonin-like receptor ...    31   3.3  
L76380-1|AAC41994.1|  461|Homo sapiens CGRP type 1 receptor prot...    31   3.3  
AY389506-1|AAQ91332.1|  461|Homo sapiens calcitonin receptor-lik...    31   3.3  
AC007319-1|AAY14806.1|  390|Homo sapiens unknown protein.              31   3.3  

>U17473-1|AAA62158.1|  461|Homo sapiens calcitonin-like receptor
           protein.
          Length = 461

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 199 IFHFFS*LICCGELFHCLRLFTIFLCEKIVQISHV-LILNNNSLVPVN 59
           IF +F  L C     H   LF  F+C  +V I H+  + NN +LV  N
Sbjct: 162 IFFYFKSLSCQRITLH-KNLFFSFVCNSVVTIIHLTAVANNQALVATN 208


>L76380-1|AAC41994.1|  461|Homo sapiens CGRP type 1 receptor
           protein.
          Length = 461

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 199 IFHFFS*LICCGELFHCLRLFTIFLCEKIVQISHV-LILNNNSLVPVN 59
           IF +F  L C     H   LF  F+C  +V I H+  + NN +LV  N
Sbjct: 162 IFFYFKSLSCQRITLH-KNLFFSFVCNSVVTIIHLTAVANNQALVATN 208


>AY389506-1|AAQ91332.1|  461|Homo sapiens calcitonin receptor-like
           protein protein.
          Length = 461

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 199 IFHFFS*LICCGELFHCLRLFTIFLCEKIVQISHV-LILNNNSLVPVN 59
           IF +F  L C     H   LF  F+C  +V I H+  + NN +LV  N
Sbjct: 162 IFFYFKSLSCQRITLH-KNLFFSFVCNSVVTIIHLTAVANNQALVATN 208


>AC007319-1|AAY14806.1|  390|Homo sapiens unknown protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 199 IFHFFS*LICCGELFHCLRLFTIFLCEKIVQISHV-LILNNNSLVPVN 59
           IF +F  L C     H   LF  F+C  +V I H+  + NN +LV  N
Sbjct: 162 IFFYFKSLSCQRITLH-KNLFFSFVCNSVVTIIHLTAVANNQALVATN 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,652,972
Number of Sequences: 237096
Number of extensions: 1148975
Number of successful extensions: 2752
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2750
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)