Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P13
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr...    27   6.3  

>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
           protein ZK757.3b protein.
          Length = 1037

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -1

Query: 420 LTLPVSGAKSSEIRSRPASGTPLPPCNTWILSP 322
           LT   SG+ S  I SRPASG   P  +   LSP
Sbjct: 15  LTSSGSGSMSPPITSRPASGQASPLTSNGSLSP 47


>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
           protein ZK757.3b protein.
          Length = 1037

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -1

Query: 420 LTLPVSGAKSSEIRSRPASGTPLPPCNTWILSP 322
           LT   SG+ S  I SRPASG   P  +   LSP
Sbjct: 15  LTSSGSGSMSPPITSRPASGQASPLTSNGSLSP 47


>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical
           protein T22B3.2a protein.
          Length = 1032

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -1

Query: 420 LTLPVSGAKSSEIRSRPASGTPLPPCNTWILSP 322
           LT   SG+ S  I SRPASG   P  +   LSP
Sbjct: 15  LTSSGSGSLSPPITSRPASGQASPLSSNGSLSP 47


>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical
           protein T22B3.2a protein.
          Length = 1032

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -1

Query: 420 LTLPVSGAKSSEIRSRPASGTPLPPCNTWILSP 322
           LT   SG+ S  I SRPASG   P  +   LSP
Sbjct: 15  LTSSGSGSLSPPITSRPASGQASPLSSNGSLSP 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,767,434
Number of Sequences: 27780
Number of extensions: 170618
Number of successful extensions: 487
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)