Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P09
(301 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0196 - 5678744-5679222,5679304-5679937 28 1.2
11_04_0299 + 16127671-16128180,16128217-16128516 28 1.6
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 28 1.6
02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856 27 2.1
12_02_0541 + 20162313-20162374,20162670-20163419,20164627-201648... 27 2.7
11_03_0191 - 11366831-11367676 27 2.7
01_05_0322 + 20932151-20932470,20933076-20933146,20933259-20933266 27 2.7
01_05_0169 + 18874799-18875057,18875103-18875338 27 2.7
11_04_0300 - 16130589-16131158,16131594-16131680 26 4.7
10_08_0273 + 16395117-16395444,16397030-16397135,16397174-16397321 26 6.3
10_01_0013 + 154098-154101,154513-154673,154773-154847,155071-15... 26 6.3
09_02_0472 + 9657354-9658346 26 6.3
12_02_0292 + 16979550-16980662,16983249-16983731 25 8.3
12_02_0213 - 15745459-15745908,15745981-15746559 25 8.3
12_02_0062 - 13084207-13084800 25 8.3
11_04_0220 + 14991666-14992892 25 8.3
09_02_0125 + 4554786-4556012 25 8.3
07_03_0614 - 19974200-19975426 25 8.3
07_03_0416 - 17962740-17963009,17963076-17963732 25 8.3
07_03_0201 - 15036103-15037329 25 8.3
07_02_0011 + 11753791-11753923,11754178-11754269,11757396-117576... 25 8.3
07_01_0390 + 2931331-2932299 25 8.3
04_04_0874 - 28988687-28989736 25 8.3
04_04_0530 + 26024931-26025923 25 8.3
04_01_0472 - 6144655-6145182,6145204-6145881,6149337-6149765,614... 25 8.3
04_01_0230 - 2921845-2922690 25 8.3
03_05_0480 + 24740567-24741559 25 8.3
02_04_0176 + 20658610-20659836 25 8.3
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 25 8.3
01_03_0141 + 13015330-13016175 25 8.3
01_02_0066 + 10785843-10786835 25 8.3
>09_02_0196 - 5678744-5679222,5679304-5679937
Length = 370
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSEV 175
RD FF T+ Y FHA+L EV
Sbjct: 214 RDRYFFLTRPYPPAFHALLGEV 235
>11_04_0299 + 16127671-16128180,16128217-16128516
Length = 269
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSEV 175
RD FF T Y FHA+L EV
Sbjct: 125 RDRYFFLTPSYPPAFHALLGEV 146
>10_01_0307 +
3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 19 AELKGAWIVL*V*NLHLSYLVCFLIMRNPVSRCNFFFYKMLC 144
AEL +W+ + ++L + + FL + +SRCN + MLC
Sbjct: 216 AELTISWLEETLIEINLIFDILFLFFYDNLSRCNGGLWIMLC 257
>02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856
Length = 299
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y TFHA+L E
Sbjct: 62 RDRYFFLTPPYPPTFHALLGE 82
>12_02_0541 +
20162313-20162374,20162670-20163419,20164627-20164820,
20165001-20165074,20165094-20165114
Length = 366
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSEV 175
RD FF T Y FHA+L EV
Sbjct: 135 RDRYFFLTPPYPPAFHALLGEV 156
>11_03_0191 - 11366831-11367676
Length = 281
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSEV 175
RD FF T Y FHA+L EV
Sbjct: 125 RDRYFFLTPPYPPAFHALLGEV 146
>01_05_0322 + 20932151-20932470,20933076-20933146,20933259-20933266
Length = 132
Score = 27.1 bits (57), Expect = 2.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 163 NCMKCTYITFCKKKNC 116
+C C Y+ FCK++ C
Sbjct: 10 SCRSCQYVNFCKREAC 25
>01_05_0169 + 18874799-18875057,18875103-18875338
Length = 164
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSEV 175
RD FF T Y FHA+L EV
Sbjct: 65 RDRYFFLTPPYPPAFHALLGEV 86
>11_04_0300 - 16130589-16131158,16131594-16131680
Length = 218
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
R+ FFFT Y FHA+L E
Sbjct: 62 RERYFFFTPPYPPAFHALLGE 82
>10_08_0273 + 16395117-16395444,16397030-16397135,16397174-16397321
Length = 193
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 125 KKLHLDTGFRIIKKQTR*LKCKFYTYNT 42
K H +T FR+ + R L C+FY YN+
Sbjct: 87 KMQHGNTSFRVCE-DGRVLVCRFYNYNS 113
>10_01_0013 +
154098-154101,154513-154673,154773-154847,155071-155571,
155873-156214,158107-158234,158296-158342,160117-160196,
160569-160654,161409-161556,161947-162082,162160-162488,
162953-163169,164547-164572
Length = 759
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +2
Query: 176 FCIEGHNLLILTSYNT-YCD 232
FCI+ HN L Y T YCD
Sbjct: 396 FCIQNHNFLSPYMYGTSYCD 415
>09_02_0472 + 9657354-9658346
Length = 330
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTSPYPPAFHALLGE 194
>12_02_0292 + 16979550-16980662,16983249-16983731
Length = 531
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>12_02_0213 - 15745459-15745908,15745981-15746559
Length = 342
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 228 RDRYFFLTPPYPPAFHALLGE 248
>12_02_0062 - 13084207-13084800
Length = 197
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 41 RDRYFFLTPPYPPAFHALLGE 61
>11_04_0220 + 14991666-14992892
Length = 408
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>09_02_0125 + 4554786-4556012
Length = 408
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>07_03_0614 - 19974200-19975426
Length = 408
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>07_03_0416 - 17962740-17963009,17963076-17963732
Length = 308
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTPPYPPAFHALLGE 194
>07_03_0201 - 15036103-15037329
Length = 408
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>07_02_0011 +
11753791-11753923,11754178-11754269,11757396-11757689,
11757801-11758622
Length = 446
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 290 RDRYFFLTPPYPPAFHALLGE 310
>07_01_0390 + 2931331-2932299
Length = 322
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTPPYPPAFHALLGE 194
>04_04_0874 - 28988687-28989736
Length = 349
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>04_04_0530 + 26024931-26025923
Length = 330
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTPPYPPAFHALLGE 194
>04_01_0472 -
6144655-6145182,6145204-6145881,6149337-6149765,
6149930-6150123,6150222-6150261
Length = 622
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 466 RDRYFFLTPPYPPAFHALLGE 486
>04_01_0230 - 2921845-2922690
Length = 281
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 125 RDRYFFLTPPYPPAFHALLGE 145
>03_05_0480 + 24740567-24741559
Length = 330
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 174 RDCYFFLTLPYPPAFHALLGE 194
>02_04_0176 + 20658610-20659836
Length = 408
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 799 RDRYFFLTPPYPPAFHALLGE 819
>01_03_0141 + 13015330-13016175
Length = 281
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 125 RDRYFFLTPPYPPAFHALLGE 145
>01_02_0066 + 10785843-10786835
Length = 330
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 RDAIFFFTKCYVCTFHAILSE 172
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTPPYPPAFHALLGE 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,590,229
Number of Sequences: 37544
Number of extensions: 108023
Number of successful extensions: 215
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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