Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P09
         (301 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   0.82 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   2.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   4.3  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   4.3  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    22   5.7  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    22   5.7  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    22   5.7  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     21   7.6  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 178 EHFRKNCMKCTYITFCKKKNCIS 110
           +HF     KCT  T C KKNC S
Sbjct: 928 KHFINITSKCTASTTC-KKNCAS 949


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 24  IKRCMDSVISIKFTFKLSCLFFNYAKSS 107
           ++ C D    I F+  LS + FNY  S+
Sbjct: 737 LRLCPDKCSVISFSHSLSPISFNYTLSN 764


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 122  FFFTKCYVCTFHAILSEVFCIEGHNLLILTSYNT 223
            F  T C+       L+ + C E H L  +  +NT
Sbjct: 3071 FHITNCFRTNSADNLNTITCYEQHGLSYVFPHNT 3104


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 188 LRYRTLQKELHEMYIHNIL*KKKLHLDTGFRI 93
           + Y  ++KEL + ++H +    K  L  G ++
Sbjct: 794 IHYAVIKKELQDKFLHRVSCILKSFLSVGNKV 825


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 134 KCYVCTFHAILSEVFCIEGHNLLILTSYNTYCDSP 238
           K  + T H   SE++C+    LL+      +  SP
Sbjct: 294 KTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSP 328


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 134 KCYVCTFHAILSEVFCIEGHNLLILTSYNTYCDSP 238
           K  + T H   SE++C+    LL+      +  SP
Sbjct: 294 KTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSP 328


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 134 KCYVCTFHAILSEVFCIEGHNLLILTSYNTYCDSP 238
           K  + T H   SE++C+    LL+      +  SP
Sbjct: 272 KTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSP 306


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 78  CLFFNYAKSSIEMQFFFLQNVMYV 149
           CL FN  +S    +FF+  N  Y+
Sbjct: 119 CLPFNLVESENFKKFFYTLNPNYI 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,119
Number of Sequences: 2352
Number of extensions: 5462
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)