Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P09
(301 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065003-1|AAH65003.1| 643|Homo sapiens solute carrier family 2... 28 6.2
AL359091-7|CAI13490.1| 643|Homo sapiens solute carrier family 2... 28 6.2
AF218840-1|AAF81013.1| 636|Homo sapiens testis-specific poly(A)... 28 6.2
AF055899-1|AAD11623.1| 641|Homo sapiens fatty acid transport pr... 28 6.2
AC092610-3|AAS07561.1| 636|Homo sapiens unknown protein. 28 6.2
AB284524-1|BAF41975.1| 637|Homo sapiens testis-specific poly(A)... 28 6.2
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 27 8.2
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 27 8.2
BC036653-1|AAH36653.2| 637|Homo sapiens poly(A) polymerase beta... 27 8.2
AK000990-1|BAA91457.1| 535|Homo sapiens protein ( Homo sapiens ... 27 8.2
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 27 8.2
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 27 8.2
>BC065003-1|AAH65003.1| 643|Homo sapiens solute carrier family 27
(fatty acid transporter), member 4 protein.
Length = 643
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 236 VSHSKYYRMLILINYALRYR 177
V HS+YYRM L+ Y R R
Sbjct: 258 VVHSRYYRMAALVYYGFRMR 277
>AL359091-7|CAI13490.1| 643|Homo sapiens solute carrier family 27
(fatty acid transporter), member 4 protein.
Length = 643
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 236 VSHSKYYRMLILINYALRYR 177
V HS+YYRM L+ Y R R
Sbjct: 258 VVHSRYYRMAALVYYGFRMR 277
>AF218840-1|AAF81013.1| 636|Homo sapiens testis-specific poly(A)
polymerase protein.
Length = 636
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -3
Query: 230 HSKYYRMLILINYALRYRTLQKELHEMYIHNIL*KKKLHLDTGFRI 93
+SK + M + I A+ R +KELH++ H++L KK H G R+
Sbjct: 473 NSKMFEMGMKIT-AMHLR--RKELHQLLPHHVLQDKKAHSTEGRRL 515
>AF055899-1|AAD11623.1| 641|Homo sapiens fatty acid transport
protein protein.
Length = 641
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 236 VSHSKYYRMLILINYALRYR 177
V HS+YYRM L+ Y R R
Sbjct: 258 VVHSRYYRMAALVYYGFRMR 277
>AC092610-3|AAS07561.1| 636|Homo sapiens unknown protein.
Length = 636
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -3
Query: 230 HSKYYRMLILINYALRYRTLQKELHEMYIHNIL*KKKLHLDTGFRI 93
+SK + M + I A+ R +KELH++ H++L KK H G R+
Sbjct: 473 NSKMFEMGMKIT-AMHLR--RKELHQLLPHHVLQDKKAHSTEGRRL 515
>AB284524-1|BAF41975.1| 637|Homo sapiens testis-specific poly(A)
polymerase protein.
Length = 637
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -3
Query: 230 HSKYYRMLILINYALRYRTLQKELHEMYIHNIL*KKKLHLDTGFRI 93
+SK + M + I A+ R +KELH++ H++L KK H G R+
Sbjct: 474 NSKMFEMGMKIT-AMHLR--RKELHQLLPHHVLQDKKAHSTEGRRL 516
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 188 LRYRTLQKELHEMYIHNIL*KKKLH 114
L+ +TLQKE+ ++Y+ N L K++ H
Sbjct: 710 LKNQTLQKEIEKVYLDNKLLKEQAH 734
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 188 LRYRTLQKELHEMYIHNIL*KKKLH 114
L+ +TLQKE+ ++Y+ N L K++ H
Sbjct: 710 LKNQTLQKEIEKVYLDNKLLKEQAH 734
>BC036653-1|AAH36653.2| 637|Homo sapiens poly(A) polymerase beta
(testis specific) protein.
Length = 637
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -3
Query: 230 HSKYYRMLILINYALRYRTLQKELHEMYIHNIL*KKKLHLDTGFRI 93
+SK + M + I A+ R +KELH++ H++L KK H G R+
Sbjct: 474 NSKMFEMGMKIT-AVHLR--RKELHQLLPHHVLQDKKAHSTEGRRL 516
>AK000990-1|BAA91457.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ10128 fis, clone HEMBA1002997, weakly similar to
CENTROMERIC PROTEIN E. ).
Length = 535
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 188 LRYRTLQKELHEMYIHNIL*KKKLH 114
L+ +TLQKE+ ++Y+ N L K++ H
Sbjct: 58 LKNQTLQKEIEKVYLDNKLLKEQAH 82
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 188 LRYRTLQKELHEMYIHNIL*KKKLH 114
L+ +TLQKE+ ++Y+ N L K++ H
Sbjct: 710 LKNQTLQKEIEKVYLDNKLLKEQAH 734
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 188 LRYRTLQKELHEMYIHNIL*KKKLH 114
L+ +TLQKE+ ++Y+ N L K++ H
Sbjct: 710 LKNQTLQKEIEKVYLDNKLLKEQAH 734
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,908,436
Number of Sequences: 237096
Number of extensions: 684628
Number of successful extensions: 913
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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