Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P07
         (365 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109050-1|AAI09051.1|  214|Homo sapiens TM2 domain containing 2...   107   1e-23
BC109049-1|AAI09050.1|  214|Homo sapiens TM2 domain containing 2...   107   1e-23
AF353991-1|AAK35065.1|  214|Homo sapiens BBP-like protein 1 prot...   107   1e-23
BC004878-1|AAH04878.2|  171|Homo sapiens TM2 domain containing 2...    95   6e-20
AK075155-1|BAC11437.1|  171|Homo sapiens protein ( Homo sapiens ...    95   6e-20
AK075027-1|BAC11359.1|  171|Homo sapiens protein ( Homo sapiens ...    95   6e-20

>BC109050-1|AAI09051.1|  214|Homo sapiens TM2 domain containing 2
           protein.
          Length = 214

 Score =  107 bits (257), Expect = 1e-23
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = +3

Query: 135 PLGPLVKCSFLPLEFLDCDEPIDHKGNRTAKDAIGHGCVKFGGVYYDDVEKTKVQCKALD 314
           P  P++ CS+LP EF++C++P+DH GN TA   +G+GC+KFGG  Y DVE T VQC ALD
Sbjct: 66  PHSPVILCSYLPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALD 125

Query: 315 GIECSGSRSFPRAGFPC 365
           GIEC+  R+F R   PC
Sbjct: 126 GIECASPRTFLRENKPC 142


>BC109049-1|AAI09050.1|  214|Homo sapiens TM2 domain containing 2
           protein.
          Length = 214

 Score =  107 bits (257), Expect = 1e-23
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = +3

Query: 135 PLGPLVKCSFLPLEFLDCDEPIDHKGNRTAKDAIGHGCVKFGGVYYDDVEKTKVQCKALD 314
           P  P++ CS+LP EF++C++P+DH GN TA   +G+GC+KFGG  Y DVE T VQC ALD
Sbjct: 66  PHSPVILCSYLPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALD 125

Query: 315 GIECSGSRSFPRAGFPC 365
           GIEC+  R+F R   PC
Sbjct: 126 GIECASPRTFLRENKPC 142


>AF353991-1|AAK35065.1|  214|Homo sapiens BBP-like protein 1
           protein.
          Length = 214

 Score =  107 bits (257), Expect = 1e-23
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = +3

Query: 135 PLGPLVKCSFLPLEFLDCDEPIDHKGNRTAKDAIGHGCVKFGGVYYDDVEKTKVQCKALD 314
           P  P++ CS+LP EF++C++P+DH GN TA   +G+GC+KFGG  Y DVE T VQC ALD
Sbjct: 66  PHSPVILCSYLPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALD 125

Query: 315 GIECSGSRSFPRAGFPC 365
           GIEC+  R+F R   PC
Sbjct: 126 GIECASPRTFLRENKPC 142


>BC004878-1|AAH04878.2|  171|Homo sapiens TM2 domain containing 2
           protein.
          Length = 171

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +3

Query: 159 SFLPLEFLDCDEPIDHKGNRTAKDAIGHGCVKFGGVYYDDVEKTKVQCKALDGIECSGSR 338
           ++ P EF++C++P+DH GN TA   +G+GC+KFGG  Y DVE T VQC ALDGIEC+  R
Sbjct: 31  NYRPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPR 90

Query: 339 SFPRAGFPC 365
           +F R   PC
Sbjct: 91  TFLRENKPC 99


>AK075155-1|BAC11437.1|  171|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90674 fis, clone PLACE1005660, highly similar to
           BBP-like protein 1 isoform a. ).
          Length = 171

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +3

Query: 159 SFLPLEFLDCDEPIDHKGNRTAKDAIGHGCVKFGGVYYDDVEKTKVQCKALDGIECSGSR 338
           ++ P EF++C++P+DH GN TA   +G+GC+KFGG  Y DVE T VQC ALDGIEC+  R
Sbjct: 31  NYRPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPR 90

Query: 339 SFPRAGFPC 365
           +F R   PC
Sbjct: 91  TFLRENKPC 99


>AK075027-1|BAC11359.1|  171|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90546 fis, clone OVARC1000439, highly similar to
           BBP-like protein 1 isoform a. ).
          Length = 171

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +3

Query: 159 SFLPLEFLDCDEPIDHKGNRTAKDAIGHGCVKFGGVYYDDVEKTKVQCKALDGIECSGSR 338
           ++ P EF++C++P+DH GN TA   +G+GC+KFGG  Y DVE T VQC ALDGIEC+  R
Sbjct: 31  NYRPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPR 90

Query: 339 SFPRAGFPC 365
           +F R   PC
Sbjct: 91  TFLRENKPC 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,076,687
Number of Sequences: 237096
Number of extensions: 848702
Number of successful extensions: 1468
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)