Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P07
         (365 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   0.85 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   0.85 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   0.85 
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   2.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   4.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.85
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 204 DLSVRRSQGIPTVKSCISLMGQEV-YKV 124
           DL +   QG+  +KSC + +G+ V YK+
Sbjct: 132 DLPINNVQGLRGLKSCHTGVGRNVGYKI 159


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.85
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 204 DLSVRRSQGIPTVKSCISLMGQEV-YKV 124
           DL +   QG+  +KSC + +G+ V YK+
Sbjct: 132 DLPINNVQGLRGLKSCHTGVGRNVGYKI 159


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.85
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 204 DLSVRRSQGIPTVKSCISLMGQEV-YKV 124
           DL +   QG+  +KSC + +G+ V YK+
Sbjct: 132 DLPINNVQGLRGLKSCHTGVGRNVGYKI 159


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 117 SKEPYRPLGPLVKCSFLPLEFLDCDEPIDHKGNRTAKDAIGHGCVKF-GGVYYDDVEKTK 293
           S+E  + LG    C F  L F+D        GN    + +  G  +     + +DV +  
Sbjct: 45  SEEQMKKLGCFEACVFQKLHFMD--------GNTLNVEKLESGTRELTPDDFTEDVHEII 96

Query: 294 VQC--KALDGIECSGSRSF 344
            QC  KA D  EC  +R +
Sbjct: 97  EQCVSKAADEDECMVARKY 115


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 189 DEPIDHKGNRTAKDAIGHGCVKFGG 263
           ++P+D   N       GHG  K+ G
Sbjct: 263 EKPLDVSSNDKVHPLYGHGVCKWPG 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,066
Number of Sequences: 438
Number of extensions: 1677
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)